Wall clock time and date at job start Sat Mar 6 2021 00:23:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34770 * 1 3 3 O 1.21276 * 120.00373 * 2 1 4 4 C 1.50701 * 120.00018 * 180.02562 * 2 1 3 5 5 H 1.09000 * 112.85324 * 48.79632 * 4 2 1 6 6 C 1.53783 * 113.61753 * 179.97438 * 4 2 1 7 7 C 1.53777 * 87.08383 * 139.97733 * 6 4 2 8 8 H 1.09007 * 113.61112 * 89.20043 * 7 6 4 9 9 N 1.46499 * 113.61720 * 220.01988 * 7 6 4 10 10 S 1.65603 * 119.99938 * 215.22172 * 9 7 6 11 11 O 1.42099 * 106.40396 * 311.44980 * 10 9 7 12 12 O 1.42100 * 106.39986 * 178.52800 * 10 9 7 13 13 C 1.76203 * 107.21557 * 64.99177 * 10 9 7 14 14 C 1.33386 * 122.54195 * 66.99231 * 13 10 9 15 15 C 1.50704 * 125.20257 * 359.97438 * 14 13 10 16 16 O 1.42902 * 109.47049 * 313.56857 * 15 14 13 17 17 Si 1.86298 * 109.47324 * 193.56749 * 15 14 13 18 18 S 1.75878 * 109.59383 * 179.97438 * 14 13 10 19 19 C 1.75885 * 90.97182 * 0.02562 * 18 14 13 20 20 C 1.33382 * 109.59175 * 359.97438 * 19 18 14 21 21 C 1.53784 * 113.61259 * 277.49480 * 4 2 1 22 22 H 0.97001 * 119.99974 * 180.02562 * 1 2 3 23 23 H 0.97002 * 120.00296 * 359.97438 * 1 2 3 24 24 H 1.09004 * 113.60764 * 25.42853 * 6 4 2 25 25 H 1.08998 * 113.69113 * 254.54033 * 6 4 2 26 26 H 0.97001 * 119.99839 * 35.23032 * 9 7 6 27 27 H 1.09007 * 109.46721 * 73.56572 * 15 14 13 28 28 H 0.96700 * 114.00179 * 300.10541 * 16 15 14 29 29 H 1.48504 * 109.99951 * 58.67965 * 17 15 14 30 30 H 1.48496 * 110.00122 * 180.02562 * 17 15 14 31 31 H 1.08000 * 125.20095 * 179.73599 * 19 18 14 32 32 H 1.08001 * 122.54180 * 179.97438 * 20 19 18 33 33 H 1.09002 * 113.61550 * 105.47094 * 21 4 2 34 34 H 1.09001 * 113.61321 * 334.56063 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0502 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7399 -2.0022 -0.7566 6 6 3.6295 -1.1341 -0.0011 7 6 3.6829 -2.3119 0.9862 8 1 3.7552 -3.2854 0.5011 9 7 4.6665 -2.1355 2.0575 10 16 5.4982 -3.4431 2.6414 11 8 4.5306 -4.4507 2.9014 12 8 6.3862 -2.9440 3.6322 13 6 6.5064 -4.0483 1.3291 14 6 7.5322 -3.3543 0.8337 15 6 7.9684 -1.9916 1.3068 16 8 6.8257 -1.1429 1.4332 17 14 9.1547 -1.2562 0.0729 18 16 8.2978 -4.2729 -0.4560 19 6 7.1473 -5.5863 -0.2441 20 6 6.2940 -5.2800 0.7342 21 6 2.2500 -1.9311 1.3962 22 1 -0.4850 -0.8401 0.0004 23 1 -0.4851 0.8400 0.0004 24 1 3.9632 -0.1893 0.4278 25 1 4.0940 -1.3497 -0.9634 26 1 4.8305 -1.2529 2.4248 27 1 8.4614 -2.0836 2.2747 28 1 6.3361 -1.0170 0.6088 29 1 8.5048 -1.1550 -1.2585 30 1 9.5928 0.0877 0.5282 31 1 7.1315 -6.4993 -0.8209 32 1 5.4973 -5.9425 1.0388 33 1 1.5999 -2.7903 1.5611 34 1 2.2066 -1.2042 2.2073 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_11684970_14772022.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:23:38 Heat of formation + Delta-G solvation = -78.427568 kcal Electronic energy + Delta-G solvation = -23652.818877 eV Core-core repulsion = 20000.051249 eV Total energy + Delta-G solvation = -3652.767629 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.043 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.31129 -39.70290 -38.89950 -38.38101 -37.49172 -36.93839 -34.68110 -33.85801 -31.80538 -27.50993 -26.87117 -26.67504 -24.39644 -22.29771 -21.80947 -20.67484 -20.06609 -19.32725 -18.79801 -18.34239 -18.01553 -17.82583 -17.02468 -16.76126 -16.50738 -16.32044 -15.94969 -15.45835 -15.40046 -15.12265 -14.59055 -14.17537 -14.04191 -13.90392 -13.81810 -13.54245 -13.44017 -13.26205 -13.15066 -12.83922 -12.52389 -12.29933 -12.21456 -11.95632 -11.82219 -11.54255 -11.05926 -10.90872 -10.65828 -10.34768 -10.11352 -9.72681 -5.12936 -0.69005 -0.47406 0.39246 0.66172 1.08032 1.14577 1.51169 1.60233 1.84113 2.06575 2.67177 2.70328 3.12394 3.28184 3.43013 3.47785 3.49678 3.75482 3.86246 4.05426 4.18534 4.26761 4.37377 4.45123 4.68743 4.72529 4.79464 4.81758 4.96348 4.99677 5.01474 5.16698 5.45782 5.88332 6.08950 6.23878 6.47777 7.34824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.521 3.479 3 O -0.596 6.596 4 C -0.132 4.132 5 H 0.151 0.849 6 C -0.129 4.129 7 C 0.126 3.874 8 H 0.134 0.866 9 N -1.083 6.083 10 S 2.723 3.277 11 O -0.988 6.988 12 O -0.986 6.986 13 C -0.674 4.674 14 C -0.107 4.107 15 C -0.082 4.082 16 O -0.528 6.528 17 Si 0.741 3.259 18 S 0.193 5.807 19 C -0.207 4.207 20 C -0.096 4.096 21 C -0.134 4.134 22 H 0.418 0.582 23 H 0.403 0.597 24 H 0.089 0.911 25 H 0.096 0.904 26 H 0.428 0.572 27 H 0.145 0.855 28 H 0.390 0.610 29 H -0.250 1.250 30 H -0.269 1.269 31 H 0.199 0.801 32 H 0.161 0.839 33 H 0.101 0.899 34 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.102 -4.030 -6.880 8.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.307 3.693 3 O -0.477 6.477 4 C -0.153 4.153 5 H 0.168 0.832 6 C -0.169 4.169 7 C 0.019 3.981 8 H 0.151 0.849 9 N -0.845 5.845 10 S 2.812 3.188 11 O -0.978 6.978 12 O -0.977 6.977 13 C -0.776 4.776 14 C -0.228 4.228 15 C -0.192 4.192 16 O -0.338 6.338 17 Si 0.640 3.360 18 S 0.457 5.543 19 C -0.343 4.343 20 C -0.123 4.123 21 C -0.174 4.174 22 H 0.250 0.750 23 H 0.234 0.766 24 H 0.108 0.892 25 H 0.115 0.885 26 H 0.267 0.733 27 H 0.163 0.837 28 H 0.241 0.759 29 H -0.175 1.175 30 H -0.194 1.194 31 H 0.216 0.784 32 H 0.178 0.822 33 H 0.119 0.881 34 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.936 -3.127 -7.040 7.759 hybrid contribution -2.497 0.428 0.521 2.587 sum -1.562 -2.698 -6.519 7.226 Atomic orbital electron populations 1.43845 1.06625 1.13720 1.76091 1.20895 0.83326 0.91258 0.73846 1.90742 1.69420 1.35488 1.52036 1.22666 0.96532 0.94798 1.01332 0.83179 1.23355 0.93954 0.98875 1.00694 1.22456 0.87444 1.00596 0.87617 0.84865 1.55374 1.52564 1.25119 1.51483 1.00806 0.72664 0.72479 0.72878 1.93546 1.60915 1.59491 1.83878 1.93543 1.66558 1.80199 1.57355 1.29685 1.16504 1.06389 1.25064 1.25140 0.97930 1.00694 0.99086 1.25221 0.95653 0.86163 1.12146 1.86654 1.40506 1.67844 1.38753 0.94248 0.82385 0.84299 0.75111 1.84174 1.31201 1.09359 1.29519 1.26276 0.99305 1.04637 1.04067 1.19864 1.01748 0.94561 0.96177 1.23439 0.97411 1.01581 0.94992 0.75025 0.76600 0.89209 0.88545 0.73276 0.83719 0.75928 1.17451 1.19386 0.78372 0.82198 0.88056 0.89940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.16 8.87 -173.54 -1.54 3.62 16 2 C 0.52 0.19 7.63 87.66 0.67 0.86 16 3 O -0.60 -6.47 16.74 -3.02 -0.05 -6.52 16 4 C -0.13 0.83 4.15 -11.01 -0.05 0.78 16 5 H 0.15 -1.86 8.14 -2.39 -0.02 -1.88 16 6 C -0.13 0.68 6.65 31.12 0.21 0.89 16 7 C 0.13 -0.66 4.35 45.53 0.20 -0.46 16 8 H 0.13 -1.13 8.05 -2.38 -0.02 -1.14 16 9 N -1.08 1.27 3.77 -167.14 -0.63 0.64 16 10 S 2.72 13.99 4.88 -56.49 -0.28 13.72 16 11 O -0.99 -9.82 17.10 -128.00 -2.19 -12.01 16 12 O -0.99 -11.95 16.64 -124.31 -2.07 -14.01 16 13 C -0.67 -0.90 5.77 21.22 0.12 -0.77 16 14 C -0.11 0.09 5.75 24.59 0.14 0.23 16 15 C -0.08 0.07 2.07 71.24 0.15 0.22 16 16 O -0.53 0.38 8.61 -144.56 -1.24 -0.86 16 17 Si 0.74 -2.64 31.06 68.60 2.13 -0.51 16 18 S 0.19 -0.91 20.70 -56.49 -1.17 -2.08 16 19 C -0.21 0.91 11.23 66.72 0.75 1.66 16 20 C -0.10 0.08 9.69 21.22 0.21 0.28 16 21 C -0.13 0.72 7.43 31.14 0.23 0.95 16 22 H 0.42 -5.28 8.83 -92.71 -0.82 -6.10 16 23 H 0.40 -2.43 8.93 -92.71 -0.83 -3.26 16 24 H 0.09 -0.10 7.43 -2.39 -0.02 -0.12 16 25 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 26 H 0.43 -0.68 7.86 -96.74 -0.76 -1.44 16 27 H 0.15 0.03 7.74 -2.38 -0.02 0.01 16 28 H 0.39 -2.44 7.83 -74.06 -0.58 -3.02 16 29 H -0.25 0.46 7.11 99.48 0.71 1.16 16 30 H -0.27 -0.81 7.11 99.48 0.71 -0.10 16 31 H 0.20 -1.93 8.06 -2.91 -0.02 -1.95 16 32 H 0.16 -0.29 7.74 -2.91 -0.02 -0.31 16 33 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 34 H 0.08 -0.20 8.09 -2.39 -0.02 -0.22 16 Total: 0.00 -27.23 312.28 -6.16 -33.39 By element: Atomic # 1 Polarization: -18.26 SS G_CDS: -1.75 Total: -20.01 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: 2.63 Total: 4.64 kcal Atomic # 7 Polarization: 6.43 SS G_CDS: -2.17 Total: 4.26 kcal Atomic # 8 Polarization: -27.85 SS G_CDS: -5.55 Total: -33.40 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.13 Total: -0.51 kcal Atomic # 16 Polarization: 13.08 SS G_CDS: -1.44 Total: 11.64 kcal Total: -27.23 -6.16 -33.39 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_11684970_14772022.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.037 kcal (2) G-P(sol) polarization free energy of solvation -27.229 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.265 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.162 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.391 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds