Wall clock time and date at job start Sat Mar 6 2021 00:23:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34773 * 1 3 3 O 1.21280 * 120.00172 * 2 1 4 4 C 1.50700 * 120.00116 * 179.97438 * 2 1 3 5 5 H 1.09004 * 112.84492 * 48.80473 * 4 2 1 6 6 C 1.53778 * 113.61595 * 180.02562 * 4 2 1 7 7 C 1.53787 * 87.07889 * 139.98555 * 6 4 2 8 8 H 1.08992 * 113.61329 * 89.20529 * 7 6 4 9 9 N 1.46505 * 113.60620 * 220.01803 * 7 6 4 10 10 S 1.65598 * 119.99587 * 215.49208 * 9 7 6 11 11 O 1.42095 * 106.40717 * 311.41063 * 10 9 7 12 12 O 1.42098 * 106.40533 * 178.48906 * 10 9 7 13 13 C 1.76205 * 107.21597 * 64.95049 * 10 9 7 14 14 C 1.38209 * 119.99995 * 63.80621 * 13 10 9 15 15 C 1.50697 * 119.99900 * 359.97265 * 14 13 10 16 16 O 1.42904 * 109.47395 * 76.13964 * 15 14 13 17 17 Si 1.86300 * 109.47263 * 196.13688 * 15 14 13 18 18 C 1.38255 * 120.00064 * 180.02562 * 14 13 10 19 19 C 1.38215 * 119.99931 * 359.94619 * 18 14 13 20 20 C 1.38254 * 119.99912 * 0.05488 * 19 18 14 21 21 C 1.38209 * 119.99895 * 359.96686 * 20 19 18 22 22 C 1.53775 * 87.07923 * 334.56498 * 7 6 4 23 23 H 0.97002 * 120.00384 * 180.02562 * 1 2 3 24 24 H 0.97006 * 119.99916 * 359.97438 * 1 2 3 25 25 H 1.08999 * 113.61351 * 25.43342 * 6 4 2 26 26 H 1.08997 * 113.61391 * 254.53203 * 6 4 2 27 27 H 0.96995 * 120.00491 * 35.50512 * 9 7 6 28 28 H 1.08998 * 109.47601 * 316.13691 * 15 14 13 29 29 H 0.96707 * 113.99437 * 65.18584 * 16 15 14 30 30 H 1.48503 * 109.99940 * 58.68259 * 17 15 14 31 31 H 1.48505 * 110.00457 * 180.02562 * 17 15 14 32 32 H 1.08005 * 120.00085 * 179.97438 * 18 14 13 33 33 H 1.08005 * 119.99670 * 180.32184 * 19 18 14 34 34 H 1.08004 * 119.99797 * 179.97438 * 20 19 18 35 35 H 1.08004 * 119.99471 * 180.02562 * 21 20 19 36 36 H 1.09005 * 113.61076 * 139.98635 * 22 7 6 37 37 H 1.08993 * 113.61778 * 270.88360 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.7399 -2.0027 -0.7550 6 6 3.6295 -1.1341 0.0011 7 6 3.6820 -2.3116 0.9890 8 1 3.7549 -3.2851 0.5043 9 7 4.6650 -2.1347 2.0609 10 16 5.5011 -3.4410 2.6412 11 8 4.5369 -4.4523 2.8992 12 8 6.3879 -2.9415 3.6329 13 6 6.5107 -4.0397 1.3270 14 6 7.5165 -3.2447 0.8110 15 6 7.7494 -1.8655 1.3718 16 8 8.4201 -1.9695 2.6293 17 14 8.7994 -0.8827 0.1876 18 6 8.3084 -3.7143 -0.2205 19 6 8.0947 -4.9793 -0.7349 20 6 7.0885 -5.7745 -0.2186 21 6 6.2967 -5.3049 0.8122 22 6 2.2495 -1.9302 1.3977 23 1 -0.4851 -0.8400 0.0004 24 1 -0.4850 0.8401 0.0004 25 1 3.9629 -0.1891 0.4300 26 1 4.0934 -1.3504 -0.9612 27 1 4.8258 -1.2526 2.4307 28 1 6.7921 -1.3634 1.5111 29 1 9.3136 -2.3348 2.5695 30 1 8.1275 -0.7941 -1.1338 31 1 9.0369 0.4795 0.7294 32 1 9.0941 -3.0928 -0.6241 33 1 8.7167 -5.3481 -1.5372 34 1 6.9214 -6.7629 -0.6208 35 1 5.5110 -5.9264 1.2157 36 1 1.5993 -2.7894 1.5629 37 1 2.2057 -1.2030 2.2084 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_11684970_2726874.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:23:51 Heat of formation + Delta-G solvation = -78.077740 kcal Electronic energy + Delta-G solvation = -24933.651977 eV Core-core repulsion = 21191.747271 eV Total energy + Delta-G solvation = -3741.904706 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.086 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -41.41759 -40.74576 -38.97034 -38.26634 -37.37807 -36.68424 -34.74145 -34.12143 -32.84044 -32.47205 -27.18310 -26.92185 -26.83692 -24.48073 -22.85179 -22.43407 -21.07328 -20.36517 -19.32911 -18.58125 -18.29309 -18.03384 -17.95155 -17.12373 -16.89377 -16.50295 -16.36714 -15.98555 -15.74730 -15.51316 -15.38717 -15.04711 -14.62466 -14.25633 -14.06063 -13.94080 -13.64598 -13.58549 -13.45338 -12.94087 -12.89018 -12.74146 -12.38630 -12.26573 -12.15767 -12.09061 -12.01644 -11.57249 -10.91611 -10.73186 -10.61320 -10.53544 -10.47556 -10.13742 -5.15967 -0.62366 -0.29798 0.04504 1.10381 1.54598 1.55954 1.87803 1.89770 2.32006 2.50878 2.76850 3.19224 3.25748 3.29168 3.43029 3.47556 3.53647 3.60038 3.74675 3.77728 3.87216 4.07482 4.10599 4.16176 4.28756 4.47952 4.49802 4.51603 4.61010 4.67666 4.74890 4.80934 4.91848 5.02315 5.17104 5.23824 5.62751 5.73315 5.81645 6.27559 6.58799 7.22155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.854 5.854 2 C 0.528 3.472 3 O -0.541 6.541 4 C -0.141 4.141 5 H 0.121 0.879 6 C -0.126 4.126 7 C 0.129 3.871 8 H 0.118 0.882 9 N -1.107 6.107 10 S 2.681 3.319 11 O -0.959 6.959 12 O -0.920 6.920 13 C -0.657 4.657 14 C -0.014 4.014 15 C -0.107 4.107 16 O -0.500 6.500 17 Si 0.691 3.309 18 C -0.136 4.136 19 C -0.057 4.057 20 C -0.135 4.135 21 C -0.023 4.023 22 C -0.132 4.132 23 H 0.403 0.597 24 H 0.402 0.598 25 H 0.104 0.896 26 H 0.082 0.918 27 H 0.421 0.579 28 H 0.113 0.887 29 H 0.374 0.626 30 H -0.252 1.252 31 H -0.246 1.246 32 H 0.138 0.862 33 H 0.137 0.863 34 H 0.136 0.864 35 H 0.145 0.855 36 H 0.089 0.911 37 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.210 -3.540 -5.624 6.648 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.417 5.417 2 C 0.313 3.687 3 O -0.417 6.417 4 C -0.163 4.163 5 H 0.139 0.861 6 C -0.166 4.166 7 C 0.021 3.979 8 H 0.136 0.864 9 N -0.866 5.866 10 S 2.770 3.230 11 O -0.949 6.949 12 O -0.910 6.910 13 C -0.743 4.743 14 C -0.016 4.016 15 C -0.218 4.218 16 O -0.304 6.304 17 Si 0.591 3.409 18 C -0.154 4.154 19 C -0.075 4.075 20 C -0.154 4.154 21 C -0.042 4.042 22 C -0.172 4.172 23 H 0.231 0.769 24 H 0.233 0.767 25 H 0.123 0.877 26 H 0.100 0.900 27 H 0.257 0.743 28 H 0.131 0.869 29 H 0.220 0.780 30 H -0.176 1.176 31 H -0.170 1.170 32 H 0.155 0.845 33 H 0.154 0.846 34 H 0.154 0.846 35 H 0.163 0.837 36 H 0.108 0.892 37 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.224 -2.525 -5.140 5.731 hybrid contribution -0.779 -0.005 -0.551 0.954 sum -1.003 -2.530 -5.691 6.308 Atomic orbital electron populations 1.43896 1.07256 1.12730 1.77806 1.20364 0.82618 0.90986 0.74766 1.90768 1.68253 1.33490 1.49239 1.22613 0.97135 0.95867 1.00699 0.86131 1.23341 0.93324 0.99616 1.00304 1.22242 0.87857 0.99918 0.87841 0.86405 1.55738 1.53563 1.25951 1.51303 1.02480 0.73553 0.73184 0.73781 1.93592 1.60412 1.57873 1.82998 1.93744 1.64325 1.78803 1.54154 1.30848 1.15347 1.04954 1.23171 1.20035 0.92743 0.95398 0.93423 1.25447 1.04060 0.96874 0.95406 1.86878 1.32074 1.86424 1.25013 0.94761 0.88097 0.80905 0.77172 1.21124 1.00043 0.96988 0.97286 1.21500 0.95551 0.93084 0.97406 1.21399 0.96129 1.00659 0.97194 1.21089 0.97116 0.92897 0.93136 1.23415 0.97045 1.01506 0.95258 0.76853 0.76680 0.87731 0.89978 0.74302 0.86923 0.77988 1.17592 1.17009 0.84512 0.84553 0.84589 0.83688 0.89246 0.88584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.27 8.87 31.22 0.28 2.55 16 2 C 0.53 0.27 7.63 -10.99 -0.08 0.18 16 3 O -0.54 -2.82 16.74 5.56 0.09 -2.73 16 4 C -0.14 0.31 4.15 -90.96 -0.38 -0.07 16 5 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 6 C -0.13 0.17 7.19 -25.92 -0.19 -0.02 16 7 C 0.13 -0.22 4.35 -67.12 -0.29 -0.51 16 8 H 0.12 -0.36 8.05 -51.93 -0.42 -0.77 16 9 N -1.11 0.44 4.51 -4.20 -0.02 0.42 16 10 S 2.68 6.10 4.92 -107.50 -0.53 5.57 16 11 O -0.96 -4.29 16.73 -57.18 -0.96 -5.25 16 12 O -0.92 -4.96 15.04 -66.38 -1.00 -5.95 16 13 C -0.66 -0.63 5.88 -39.59 -0.23 -0.86 16 14 C -0.01 0.00 5.27 -104.63 -0.55 -0.55 16 15 C -0.11 -0.02 1.87 36.00 0.07 0.05 16 16 O -0.50 -0.75 10.64 -57.64 -0.61 -1.36 16 17 Si 0.69 -0.97 29.85 -169.99 -5.07 -6.05 16 18 C -0.14 0.24 8.66 -39.58 -0.34 -0.11 16 19 C -0.06 0.13 10.05 -39.58 -0.40 -0.27 16 20 C -0.13 0.21 10.05 -39.59 -0.40 -0.19 16 21 C -0.02 0.00 9.55 -39.59 -0.38 -0.38 16 22 C -0.13 0.28 7.43 -25.92 -0.19 0.09 16 23 H 0.40 -2.25 8.83 -40.82 -0.36 -2.61 16 24 H 0.40 -1.15 8.93 -40.82 -0.36 -1.51 16 25 H 0.10 0.02 7.43 -51.93 -0.39 -0.36 16 26 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 27 H 0.42 -0.58 8.60 -34.47 -0.30 -0.88 16 28 H 0.11 0.00 5.76 -51.93 -0.30 -0.30 16 29 H 0.37 -1.00 8.61 45.56 0.39 -0.61 16 30 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 31 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 32 H 0.14 -0.59 5.17 -52.48 -0.27 -0.86 16 33 H 0.14 -0.64 8.06 -52.48 -0.42 -1.07 16 34 H 0.14 -0.50 8.06 -52.48 -0.42 -0.92 16 35 H 0.15 -0.11 7.34 -52.48 -0.39 -0.49 16 36 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 37 H 0.10 -0.13 8.09 -51.93 -0.42 -0.55 16 LS Contribution 320.93 15.07 4.84 4.84 Total: 0.00 -13.10 320.93 -10.47 -23.57 By element: Atomic # 1 Polarization: -8.86 SS G_CDS: -4.12 Total: -12.98 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -3.37 Total: -2.63 kcal Atomic # 7 Polarization: 2.71 SS G_CDS: 0.26 Total: 2.97 kcal Atomic # 8 Polarization: -12.82 SS G_CDS: -2.48 Total: -15.29 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.07 Total: -6.05 kcal Atomic # 16 Polarization: 6.10 SS G_CDS: -0.53 Total: 5.57 kcal Total LS contribution 4.84 Total: 4.84 kcal Total: -13.10 -10.47 -23.57 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_11684970_2726874.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.507 kcal (2) G-P(sol) polarization free energy of solvation -13.101 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.470 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.570 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.078 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds