Wall clock time and date at job start Fri Mar 5 2021 23:16:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34782 * 1 3 3 O 1.21275 * 119.99860 * 2 1 4 4 C 1.50699 * 119.99950 * 179.97438 * 2 1 3 5 5 H 1.09004 * 112.84759 * 311.19885 * 4 2 1 6 6 C 1.53779 * 113.69045 * 82.46644 * 4 2 1 7 7 C 1.53778 * 87.08026 * 139.99184 * 6 4 2 8 8 H 1.08999 * 113.69249 * 220.00628 * 7 6 4 9 9 N 1.46508 * 113.61509 * 89.11703 * 7 6 4 10 10 S 1.65595 * 119.99876 * 117.50247 * 9 7 6 11 11 O 1.42105 * 106.40149 * 178.54167 * 10 9 7 12 12 O 1.42098 * 106.40317 * 311.46040 * 10 9 7 13 13 C 1.76204 * 107.21987 * 65.00402 * 10 9 7 14 14 C 1.38233 * 119.99533 * 269.72685 * 13 10 9 15 15 C 1.38236 * 120.00126 * 179.74618 * 14 13 10 16 16 C 1.38244 * 119.99279 * 0.54434 * 15 14 13 17 17 C 1.50704 * 119.99511 * 179.72934 * 16 15 14 18 18 O 1.42893 * 109.47117 * 119.98091 * 17 16 15 19 19 Si 1.86299 * 109.47462 * 359.97438 * 17 16 15 20 20 C 1.38232 * 120.00443 * 359.70914 * 16 15 14 21 21 C 1.38226 * 120.00179 * 89.99674 * 13 10 9 22 22 C 1.53781 * 87.08440 * 334.56937 * 7 6 4 23 23 H 0.96996 * 120.00094 * 179.97438 * 1 2 3 24 24 H 0.97002 * 120.00070 * 0.02562 * 1 2 3 25 25 H 1.09002 * 113.61659 * 25.44715 * 6 4 2 26 26 H 1.08997 * 113.61850 * 254.53805 * 6 4 2 27 27 H 0.96997 * 120.00091 * 297.50219 * 9 7 6 28 28 H 1.08001 * 120.00579 * 359.97438 * 14 13 10 29 29 H 1.07995 * 120.00944 * 180.27399 * 15 14 13 30 30 H 1.09003 * 109.46722 * 239.97792 * 17 16 15 31 31 H 0.96700 * 114.00413 * 179.97438 * 18 17 16 32 32 H 1.48497 * 110.00138 * 298.68508 * 19 17 16 33 33 H 1.48499 * 109.99761 * 60.00076 * 19 17 16 34 34 H 1.07990 * 120.00248 * 180.02562 * 20 16 15 35 35 H 1.08001 * 120.00418 * 0.02562 * 21 13 10 36 36 H 1.08992 * 113.61664 * 139.98041 * 22 7 6 37 37 H 1.09004 * 113.61421 * 270.88726 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.7399 -2.0021 0.7567 6 6 2.2503 -1.9331 -1.3952 7 6 3.6827 -2.3135 -0.9848 8 1 4.4155 -2.1843 -1.7813 9 7 3.7782 -3.6209 -0.3306 10 16 4.6638 -4.8334 -1.0289 11 8 4.5883 -5.9448 -0.1465 12 8 4.2596 -4.8929 -2.3899 13 6 6.3476 -4.3142 -1.0321 14 6 6.8520 -3.6115 -2.1104 15 6 8.1716 -3.1995 -2.1107 16 6 8.9896 -3.5000 -1.0375 17 6 10.4298 -3.0562 -1.0405 18 8 10.6661 -2.1982 0.0774 19 14 10.7924 -2.1345 -2.6185 20 6 8.4866 -4.2072 0.0384 21 6 7.1654 -4.6142 0.0411 22 6 3.6296 -1.1341 0.0006 23 1 -0.4850 -0.8400 -0.0004 24 1 -0.4850 0.8401 -0.0004 25 1 2.2070 -1.2075 -2.2074 26 1 1.6003 -2.7926 -1.5590 27 1 3.3226 -3.7763 0.5115 28 1 6.2143 -3.3812 -2.9510 29 1 8.5646 -2.6468 -2.9511 30 1 11.0791 -3.9291 -0.9723 31 1 11.5750 -1.8739 0.1392 32 1 10.5810 -3.0258 -3.7873 33 1 9.9135 -0.9421 -2.7235 34 1 9.1255 -4.4415 0.8769 35 1 6.7726 -5.1673 0.8814 36 1 4.0929 -1.3485 0.9636 37 1 3.9633 -0.1899 -0.4300 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_12220720_13421422.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:16:45 Heat of formation + Delta-G solvation = -83.287276 kcal Electronic energy + Delta-G solvation = -23966.030891 eV Core-core repulsion = 20223.900283 eV Total energy + Delta-G solvation = -3742.130608 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.086 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -41.45429 -40.72330 -39.05163 -38.25897 -37.78974 -36.91642 -34.67955 -33.86018 -33.23927 -32.31121 -27.34027 -27.24912 -26.87031 -24.22784 -22.89871 -22.48994 -21.04568 -20.42040 -19.39906 -18.71980 -18.61203 -18.20934 -17.75177 -17.36210 -17.07880 -16.82681 -16.20341 -16.04191 -15.75224 -15.59304 -15.32038 -14.82418 -14.76714 -14.36706 -14.19380 -13.96579 -13.92943 -13.67939 -13.52065 -13.15525 -13.08593 -12.86131 -12.55250 -12.43890 -12.18667 -11.99305 -11.87797 -11.73990 -10.91859 -10.75423 -10.71252 -10.62626 -10.31785 -10.22185 -5.11465 -0.78540 -0.42265 0.09512 1.09452 1.50282 1.58380 1.77375 1.81843 2.22942 2.49737 2.66997 3.09651 3.14248 3.24235 3.30892 3.52986 3.57147 3.59962 3.69363 3.71708 3.88187 4.03404 4.10881 4.14638 4.26276 4.39285 4.49176 4.58405 4.68899 4.71017 4.75080 4.83673 4.86653 4.89136 5.16002 5.19023 5.59123 5.73520 5.76378 6.29322 6.41871 7.24282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.526 3.474 3 O -0.541 6.541 4 C -0.143 4.143 5 H 0.116 0.884 6 C -0.132 4.132 7 C 0.126 3.874 8 H 0.107 0.893 9 N -1.097 6.097 10 S 2.697 3.303 11 O -0.952 6.952 12 O -0.949 6.949 13 C -0.676 4.676 14 C -0.015 4.015 15 C -0.145 4.145 16 C -0.017 4.017 17 C -0.083 4.083 18 O -0.543 6.543 19 Si 0.686 3.314 20 C -0.110 4.110 21 C -0.014 4.014 22 C -0.123 4.123 23 H 0.402 0.598 24 H 0.402 0.598 25 H 0.100 0.900 26 H 0.088 0.912 27 H 0.421 0.579 28 H 0.145 0.855 29 H 0.129 0.871 30 H 0.082 0.918 31 H 0.387 0.613 32 H -0.252 1.252 33 H -0.247 1.247 34 H 0.139 0.861 35 H 0.146 0.854 36 H 0.084 0.916 37 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.108 0.737 0.867 2.395 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.311 3.689 3 O -0.417 6.417 4 C -0.164 4.164 5 H 0.134 0.866 6 C -0.172 4.172 7 C 0.018 3.982 8 H 0.125 0.875 9 N -0.856 5.856 10 S 2.786 3.214 11 O -0.943 6.943 12 O -0.939 6.939 13 C -0.763 4.763 14 C -0.034 4.034 15 C -0.163 4.163 16 C -0.017 4.017 17 C -0.193 4.193 18 O -0.350 6.350 19 Si 0.587 3.413 20 C -0.129 4.129 21 C -0.033 4.033 22 C -0.162 4.162 23 H 0.231 0.769 24 H 0.233 0.767 25 H 0.119 0.881 26 H 0.107 0.893 27 H 0.256 0.744 28 H 0.163 0.837 29 H 0.146 0.854 30 H 0.100 0.900 31 H 0.235 0.765 32 H -0.177 1.177 33 H -0.172 1.172 34 H 0.157 0.843 35 H 0.164 0.836 36 H 0.102 0.898 37 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 1.497 0.718 -0.291 1.686 hybrid contribution -0.400 -0.070 0.892 0.980 sum 1.097 0.649 0.601 1.409 Atomic orbital electron populations 1.43918 1.07327 1.12676 1.77863 1.20455 0.82587 0.91111 0.74751 1.90765 1.68243 1.33498 1.49192 1.22830 0.97396 0.95503 1.00660 0.86614 1.23367 0.97272 1.01283 0.95293 1.21612 0.98392 0.82395 0.95783 0.87543 1.55392 1.66303 1.26395 1.37472 1.01912 0.73229 0.72443 0.73796 1.93626 1.86500 1.47808 1.66320 1.93622 1.80717 1.85415 1.34122 1.30970 1.25879 1.16257 1.03158 1.20852 0.95430 0.91435 0.95687 1.21021 0.94496 1.02088 0.98703 1.19746 0.93895 0.94082 0.93995 1.24825 0.94626 0.98704 1.01161 1.86474 1.35003 1.66522 1.46981 0.95080 0.90137 0.81130 0.74964 1.21174 0.95619 0.97801 0.98270 1.21008 0.93412 0.93234 0.95696 1.23283 0.93203 0.98985 1.00778 0.76925 0.76730 0.88130 0.89317 0.74413 0.83708 0.85410 0.89975 0.76533 1.17673 1.17167 0.84274 0.83647 0.89769 0.87164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.18 8.87 31.22 0.28 2.46 16 2 C 0.53 0.27 7.63 -10.98 -0.08 0.19 16 3 O -0.54 -2.81 16.74 5.56 0.09 -2.72 16 4 C -0.14 0.30 3.97 -90.96 -0.36 -0.06 16 5 H 0.12 -0.49 8.11 -51.93 -0.42 -0.91 16 6 C -0.13 0.31 7.43 -25.92 -0.19 0.12 16 7 C 0.13 -0.24 4.44 -67.12 -0.30 -0.54 16 8 H 0.11 -0.26 7.80 -51.93 -0.40 -0.67 16 9 N -1.10 2.21 5.73 -4.20 -0.02 2.19 16 10 S 2.70 2.77 5.68 -107.50 -0.61 2.16 16 11 O -0.95 -3.48 17.28 -57.17 -0.99 -4.46 16 12 O -0.95 -3.51 17.03 -57.17 -0.97 -4.48 16 13 C -0.68 -0.79 5.95 -39.59 -0.24 -1.03 16 14 C -0.01 -0.02 9.27 -39.58 -0.37 -0.38 16 15 C -0.14 -0.23 8.67 -39.58 -0.34 -0.57 16 16 C -0.02 -0.02 5.42 -104.62 -0.57 -0.59 16 17 C -0.08 0.09 2.81 36.01 0.10 0.19 16 18 O -0.54 0.50 12.74 -35.23 -0.45 0.06 16 19 Si 0.69 -1.28 29.79 -169.99 -5.06 -6.34 16 20 C -0.11 -0.12 9.61 -39.58 -0.38 -0.50 16 21 C -0.01 -0.01 9.52 -39.58 -0.38 -0.39 16 22 C -0.12 0.17 7.19 -25.92 -0.19 -0.02 16 23 H 0.40 -2.15 8.83 -40.82 -0.36 -2.51 16 24 H 0.40 -1.12 8.93 -40.82 -0.36 -1.48 16 25 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 26 H 0.09 -0.26 8.14 -51.93 -0.42 -0.69 16 27 H 0.42 -1.69 8.78 -34.47 -0.30 -1.99 16 28 H 0.15 -0.08 7.61 -52.49 -0.40 -0.48 16 29 H 0.13 0.09 4.88 -52.49 -0.26 -0.17 16 30 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 31 H 0.39 -2.27 8.74 45.56 0.40 -1.87 16 32 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 33 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 34 H 0.14 -0.06 8.06 -52.49 -0.42 -0.49 16 35 H 0.15 -0.10 7.62 -52.49 -0.40 -0.50 16 36 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 37 H 0.11 0.01 7.44 -51.93 -0.39 -0.38 16 LS Contribution 329.13 15.07 4.96 4.96 Total: 0.00 -13.15 329.13 -10.27 -23.41 By element: Atomic # 1 Polarization: -9.44 SS G_CDS: -4.20 Total: -13.64 kcal Atomic # 6 Polarization: -0.30 SS G_CDS: -3.29 Total: -3.59 kcal Atomic # 7 Polarization: 4.39 SS G_CDS: 0.25 Total: 4.65 kcal Atomic # 8 Polarization: -9.29 SS G_CDS: -2.32 Total: -11.61 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.06 Total: -6.34 kcal Atomic # 16 Polarization: 2.77 SS G_CDS: -0.61 Total: 2.16 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -13.15 -10.27 -23.41 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_12220720_13421422.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.874 kcal (2) G-P(sol) polarization free energy of solvation -13.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.021 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.266 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.413 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.287 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds