Wall clock time and date at job start Fri Mar 5 2021 23:16:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34782 * 1 3 3 O 1.21275 * 119.99860 * 2 1 4 4 C 1.50699 * 119.99950 * 179.97438 * 2 1 3 5 5 H 1.09004 * 112.84759 * 311.19885 * 4 2 1 6 6 C 1.53779 * 113.69045 * 82.46644 * 4 2 1 7 7 C 1.53778 * 87.08026 * 139.99184 * 6 4 2 8 8 H 1.08999 * 113.69249 * 220.00628 * 7 6 4 9 9 N 1.46508 * 113.61509 * 89.11703 * 7 6 4 10 10 S 1.65595 * 119.99876 * 117.50247 * 9 7 6 11 11 O 1.42105 * 106.40149 * 178.54167 * 10 9 7 12 12 O 1.42098 * 106.40317 * 311.46040 * 10 9 7 13 13 C 1.76204 * 107.21987 * 65.00402 * 10 9 7 14 14 C 1.38233 * 119.99533 * 269.72685 * 13 10 9 15 15 C 1.38236 * 120.00126 * 179.74618 * 14 13 10 16 16 C 1.38244 * 119.99279 * 0.54434 * 15 14 13 17 17 C 1.50704 * 119.99511 * 179.72934 * 16 15 14 18 18 O 1.42893 * 109.47117 * 119.98091 * 17 16 15 19 19 Si 1.86299 * 109.47462 * 359.97438 * 17 16 15 20 20 C 1.38232 * 120.00443 * 359.70914 * 16 15 14 21 21 C 1.38226 * 120.00179 * 89.99674 * 13 10 9 22 22 C 1.53781 * 87.08440 * 334.56937 * 7 6 4 23 23 H 0.96996 * 120.00094 * 179.97438 * 1 2 3 24 24 H 0.97002 * 120.00070 * 0.02562 * 1 2 3 25 25 H 1.09002 * 113.61659 * 25.44715 * 6 4 2 26 26 H 1.08997 * 113.61850 * 254.53805 * 6 4 2 27 27 H 0.96997 * 120.00091 * 297.50219 * 9 7 6 28 28 H 1.08001 * 120.00579 * 359.97438 * 14 13 10 29 29 H 1.07995 * 120.00944 * 180.27399 * 15 14 13 30 30 H 1.09003 * 109.46722 * 239.97792 * 17 16 15 31 31 H 0.96700 * 114.00413 * 179.97438 * 18 17 16 32 32 H 1.48497 * 110.00138 * 298.68508 * 19 17 16 33 33 H 1.48499 * 109.99761 * 60.00076 * 19 17 16 34 34 H 1.07990 * 120.00248 * 180.02562 * 20 16 15 35 35 H 1.08001 * 120.00418 * 0.02562 * 21 13 10 36 36 H 1.08992 * 113.61664 * 139.98041 * 22 7 6 37 37 H 1.09004 * 113.61421 * 270.88726 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.7399 -2.0021 0.7567 6 6 2.2503 -1.9331 -1.3952 7 6 3.6827 -2.3135 -0.9848 8 1 4.4155 -2.1843 -1.7813 9 7 3.7782 -3.6209 -0.3306 10 16 4.6638 -4.8334 -1.0289 11 8 4.5883 -5.9448 -0.1465 12 8 4.2596 -4.8929 -2.3899 13 6 6.3476 -4.3142 -1.0321 14 6 6.8520 -3.6115 -2.1104 15 6 8.1716 -3.1995 -2.1107 16 6 8.9896 -3.5000 -1.0375 17 6 10.4298 -3.0562 -1.0405 18 8 10.6661 -2.1982 0.0774 19 14 10.7924 -2.1345 -2.6185 20 6 8.4866 -4.2072 0.0384 21 6 7.1654 -4.6142 0.0411 22 6 3.6296 -1.1341 0.0006 23 1 -0.4850 -0.8400 -0.0004 24 1 -0.4850 0.8401 -0.0004 25 1 2.2070 -1.2075 -2.2074 26 1 1.6003 -2.7926 -1.5590 27 1 3.3226 -3.7763 0.5115 28 1 6.2143 -3.3812 -2.9510 29 1 8.5646 -2.6468 -2.9511 30 1 11.0791 -3.9291 -0.9723 31 1 11.5750 -1.8739 0.1392 32 1 10.5810 -3.0258 -3.7873 33 1 9.9135 -0.9421 -2.7235 34 1 9.1255 -4.4415 0.8769 35 1 6.7726 -5.1673 0.8814 36 1 4.0929 -1.3485 0.9636 37 1 3.9633 -0.1899 -0.4300 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_12220720_13421422.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:16:45 Heat of formation + Delta-G solvation = -93.320469 kcal Electronic energy + Delta-G solvation = -23966.465963 eV Core-core repulsion = 20223.900283 eV Total energy + Delta-G solvation = -3742.565680 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.086 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.40293 -40.74269 -39.06233 -38.43860 -37.68159 -37.11250 -34.67778 -33.77944 -33.24987 -32.35339 -27.29325 -27.16700 -26.73153 -24.27480 -22.90498 -22.43752 -21.05058 -20.37217 -19.41990 -18.77015 -18.47887 -18.15628 -17.73239 -17.37977 -17.04472 -16.79460 -16.21480 -16.07925 -15.78776 -15.56215 -15.30972 -14.79963 -14.74254 -14.35974 -14.17234 -13.97549 -13.92683 -13.75374 -13.41815 -13.36992 -13.29150 -12.88467 -12.56959 -12.44827 -12.24837 -11.92769 -11.76834 -11.66878 -10.94075 -10.74337 -10.67962 -10.55395 -10.31740 -10.22015 -5.00068 -0.85155 -0.49399 0.03214 1.21118 1.57556 1.58766 1.75932 1.90285 2.18342 2.58340 2.64320 3.09305 3.20736 3.34706 3.42994 3.54519 3.60320 3.68292 3.80105 3.86201 3.97926 4.03267 4.21666 4.28869 4.29906 4.49926 4.55873 4.68606 4.72969 4.77354 4.82222 4.85633 4.94335 4.99059 5.12053 5.31936 5.56172 5.86445 5.96528 6.45188 6.82090 7.32644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.520 3.480 3 O -0.596 6.596 4 C -0.135 4.135 5 H 0.144 0.856 6 C -0.129 4.129 7 C 0.123 3.877 8 H 0.110 0.890 9 N -1.083 6.083 10 S 2.719 3.281 11 O -0.978 6.978 12 O -0.977 6.977 13 C -0.681 4.681 14 C -0.024 4.024 15 C -0.163 4.163 16 C -0.033 4.033 17 C -0.087 4.087 18 O -0.560 6.560 19 Si 0.772 3.228 20 C -0.118 4.118 21 C -0.021 4.021 22 C -0.126 4.126 23 H 0.418 0.582 24 H 0.404 0.596 25 H 0.097 0.903 26 H 0.101 0.899 27 H 0.432 0.568 28 H 0.156 0.844 29 H 0.129 0.871 30 H 0.105 0.895 31 H 0.407 0.593 32 H -0.286 1.286 33 H -0.294 1.294 34 H 0.154 0.846 35 H 0.160 0.840 36 H 0.090 0.910 37 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.128 0.111 1.619 2.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.306 3.694 3 O -0.476 6.476 4 C -0.156 4.156 5 H 0.162 0.838 6 C -0.169 4.169 7 C 0.015 3.985 8 H 0.128 0.872 9 N -0.844 5.844 10 S 2.809 3.191 11 O -0.969 6.969 12 O -0.967 6.967 13 C -0.768 4.768 14 C -0.043 4.043 15 C -0.182 4.182 16 C -0.033 4.033 17 C -0.197 4.197 18 O -0.370 6.370 19 Si 0.678 3.322 20 C -0.137 4.137 21 C -0.040 4.040 22 C -0.166 4.166 23 H 0.249 0.751 24 H 0.235 0.765 25 H 0.115 0.885 26 H 0.119 0.881 27 H 0.270 0.730 28 H 0.173 0.827 29 H 0.147 0.853 30 H 0.122 0.878 31 H 0.259 0.741 32 H -0.214 1.214 33 H -0.221 1.221 34 H 0.172 0.828 35 H 0.178 0.822 36 H 0.108 0.892 37 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 1.501 0.054 0.489 1.579 hybrid contribution -0.454 0.180 0.650 0.813 sum 1.047 0.233 1.139 1.565 Atomic orbital electron populations 1.43843 1.06574 1.13725 1.76078 1.20919 0.83336 0.91235 0.73882 1.90742 1.69444 1.35457 1.52001 1.22910 0.96463 0.94660 1.01588 0.83825 1.23370 0.96975 1.01515 0.95054 1.21677 0.99041 0.81924 0.95813 0.87249 1.55050 1.65748 1.25685 1.37903 1.01062 0.73002 0.72225 0.72842 1.93585 1.86913 1.49572 1.66780 1.93584 1.81258 1.86038 1.35801 1.30965 1.25912 1.16540 1.03405 1.21065 0.95645 0.91436 0.96180 1.21202 0.94997 1.02725 0.99240 1.20148 0.95285 0.93992 0.93916 1.24918 0.93569 0.99744 1.01451 1.86424 1.37149 1.66628 1.46821 0.94212 0.88233 0.77160 0.72640 1.21418 0.95903 0.97698 0.98677 1.21278 0.93576 0.93130 0.96041 1.23240 0.94043 0.98266 1.01043 0.75074 0.76525 0.88482 0.88078 0.72981 0.82657 0.85350 0.87760 0.74089 1.21374 1.22134 0.82833 0.82239 0.89180 0.88980 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.69 8.87 -173.53 -1.54 3.15 16 2 C 0.52 0.66 7.63 87.66 0.67 1.33 16 3 O -0.60 -7.06 16.74 -3.01 -0.05 -7.11 16 4 C -0.14 0.65 3.97 -11.01 -0.04 0.60 16 5 H 0.14 -1.51 8.11 -2.39 -0.02 -1.53 16 6 C -0.13 0.67 7.43 31.12 0.23 0.90 16 7 C 0.12 -0.48 4.44 45.52 0.20 -0.28 16 8 H 0.11 -0.48 7.80 -2.39 -0.02 -0.50 16 9 N -1.08 4.87 5.73 -167.19 -0.96 3.91 16 10 S 2.72 6.12 5.68 -56.49 -0.32 5.80 16 11 O -0.98 -7.20 17.28 -128.00 -2.21 -9.41 16 12 O -0.98 -7.66 17.03 -128.00 -2.18 -9.84 16 13 C -0.68 -1.93 5.95 22.27 0.13 -1.79 16 14 C -0.02 -0.08 9.27 22.27 0.21 0.12 16 15 C -0.16 -0.69 8.67 22.27 0.19 -0.50 16 16 C -0.03 -0.10 5.42 -19.86 -0.11 -0.21 16 17 C -0.09 0.22 2.81 71.24 0.20 0.42 16 18 O -0.56 1.50 12.74 -148.98 -1.90 -0.40 16 19 Si 0.77 -2.57 29.79 68.60 2.04 -0.52 16 20 C -0.12 -0.24 9.61 22.27 0.21 -0.03 16 21 C -0.02 -0.04 9.52 22.27 0.21 0.17 16 22 C -0.13 0.30 7.19 31.12 0.22 0.53 16 23 H 0.42 -5.01 8.83 -92.71 -0.82 -5.83 16 24 H 0.40 -2.30 8.93 -92.71 -0.83 -3.12 16 25 H 0.10 -0.40 8.10 -2.39 -0.02 -0.42 16 26 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 27 H 0.43 -3.94 8.78 -96.75 -0.85 -4.79 16 28 H 0.16 0.01 7.61 -2.91 -0.02 -0.01 16 29 H 0.13 0.38 4.88 -2.91 -0.01 0.37 16 30 H 0.10 -0.73 7.96 -2.39 -0.02 -0.74 16 31 H 0.41 -5.31 8.74 -74.06 -0.65 -5.96 16 32 H -0.29 -0.63 7.11 99.48 0.71 0.08 16 33 H -0.29 -1.24 7.11 99.48 0.71 -0.53 16 34 H 0.15 -0.25 8.06 -2.92 -0.02 -0.27 16 35 H 0.16 -0.26 7.62 -2.91 -0.02 -0.29 16 36 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 37 H 0.09 0.17 7.44 -2.38 -0.02 0.15 16 Total: 0.00 -30.95 329.13 -6.73 -37.68 By element: Atomic # 1 Polarization: -22.57 SS G_CDS: -1.94 Total: -24.51 kcal Atomic # 6 Polarization: -1.07 SS G_CDS: 2.33 Total: 1.26 kcal Atomic # 7 Polarization: 9.56 SS G_CDS: -2.50 Total: 7.06 kcal Atomic # 8 Polarization: -20.43 SS G_CDS: -6.34 Total: -26.77 kcal Atomic # 14 Polarization: -2.57 SS G_CDS: 2.04 Total: -0.52 kcal Atomic # 16 Polarization: 6.12 SS G_CDS: -0.32 Total: 5.80 kcal Total: -30.95 -6.73 -37.68 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_12220720_13421422.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.640 kcal (2) G-P(sol) polarization free energy of solvation -30.952 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.592 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.728 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.680 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds