Wall clock time and date at job start Fri Mar 5 2021 23:17:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34781 * 1 3 3 O 1.21286 * 119.99761 * 2 1 4 4 C 1.50690 * 120.00289 * 180.02562 * 2 1 3 5 5 H 1.09000 * 112.85022 * 311.19245 * 4 2 1 6 6 C 1.53786 * 113.61785 * 82.49976 * 4 2 1 7 7 C 1.53780 * 87.08122 * 139.98438 * 6 4 2 8 8 H 1.09008 * 113.68538 * 220.00981 * 7 6 4 9 9 N 1.46498 * 113.61786 * 89.11881 * 7 6 4 10 10 S 1.65602 * 119.99781 * 117.83234 * 9 7 6 11 11 O 1.42100 * 106.40228 * 309.74170 * 10 9 7 12 12 O 1.42102 * 106.39942 * 176.82098 * 10 9 7 13 13 C 1.76192 * 107.21817 * 63.28649 * 10 9 7 14 14 C 1.38210 * 120.00549 * 63.74413 * 13 10 9 15 15 C 1.50698 * 119.99950 * 359.97438 * 14 13 10 16 16 O 1.42904 * 109.47135 * 75.57607 * 15 14 13 17 17 Si 1.86298 * 109.47560 * 195.57986 * 15 14 13 18 18 C 1.38258 * 120.00250 * 179.72297 * 14 13 10 19 19 C 1.38209 * 119.99940 * 0.28340 * 18 14 13 20 20 C 1.38257 * 120.00135 * 359.96957 * 19 18 14 21 21 C 1.38212 * 119.99882 * 359.96052 * 20 19 18 22 22 C 1.53776 * 87.07986 * 334.56487 * 7 6 4 23 23 H 0.96993 * 119.99946 * 180.02562 * 1 2 3 24 24 H 0.97001 * 120.00172 * 359.97438 * 1 2 3 25 25 H 1.09002 * 113.61067 * 25.43167 * 6 4 2 26 26 H 1.09002 * 113.61139 * 254.53548 * 6 4 2 27 27 H 0.96996 * 119.99976 * 297.83841 * 9 7 6 28 28 H 1.09008 * 109.46969 * 315.58185 * 15 14 13 29 29 H 0.96701 * 113.99579 * 65.35345 * 16 15 14 30 30 H 1.48501 * 110.00157 * 179.97438 * 17 15 14 31 31 H 1.48507 * 109.99533 * 301.31847 * 17 15 14 32 32 H 1.07996 * 119.99959 * 180.24996 * 18 14 13 33 33 H 1.07999 * 119.99947 * 179.97438 * 19 18 14 34 34 H 1.08000 * 120.00268 * 179.97438 * 20 19 18 35 35 H 1.08004 * 119.99825 * 180.02562 * 21 20 19 36 36 H 1.09006 * 113.61205 * 139.98308 * 22 7 6 37 37 H 1.08995 * 113.62250 * 270.80158 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1013 -1.3050 -0.0006 5 1 1.7401 -2.0027 0.7550 6 6 2.2501 -1.9299 -1.3979 7 6 3.6826 -2.3112 -0.9886 8 1 4.4152 -2.1801 -1.7851 9 7 3.7783 -3.6200 -0.3375 10 16 4.6706 -4.8284 -1.0347 11 8 4.2444 -4.9123 -2.3876 12 8 4.6271 -5.9286 -0.1364 13 6 6.3457 -4.2837 -1.0735 14 6 7.0245 -4.0514 0.1078 15 6 6.3316 -4.2633 1.4292 16 8 6.2364 -5.6636 1.6979 17 14 7.3088 -3.4362 2.7826 18 6 8.3408 -3.6295 0.0774 19 6 8.9761 -3.4345 -1.1345 20 6 8.2955 -3.6619 -2.3163 21 6 6.9801 -4.0850 -2.2858 22 6 3.6296 -1.1339 -0.0006 23 1 -0.4850 -0.8400 0.0004 24 1 -0.4850 0.8400 0.0004 25 1 2.2065 -1.2023 -2.2084 26 1 1.6000 -2.7890 -1.5634 27 1 3.3189 -3.7788 0.5019 28 1 5.3312 -3.8324 1.3881 29 1 7.0904 -6.0977 1.8295 30 1 6.6356 -3.6374 4.0909 31 1 8.6850 -3.9927 2.8281 32 1 8.8724 -3.4518 1.0005 33 1 10.0042 -3.1046 -1.1583 34 1 8.7918 -3.5091 -3.2633 35 1 6.4486 -4.2630 -3.2090 36 1 4.0932 -1.3505 0.9619 37 1 3.9645 -0.1891 -0.4287 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_12220720_2726874.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:17:04 Heat of formation + Delta-G solvation = -74.716332 kcal Electronic energy + Delta-G solvation = -24977.734026 eV Core-core repulsion = 21235.975082 eV Total energy + Delta-G solvation = -3741.758944 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.086 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -41.42464 -40.75993 -39.00455 -38.32745 -37.49086 -36.72218 -34.65400 -33.87086 -32.85644 -32.47188 -27.32171 -26.97198 -26.82538 -24.50052 -22.87328 -22.44710 -20.96083 -20.40305 -19.38464 -18.64203 -18.16363 -18.08088 -17.71938 -17.31307 -16.91482 -16.63335 -16.13208 -16.01829 -15.91711 -15.53826 -15.46354 -15.07955 -14.71330 -14.21034 -14.10244 -13.97096 -13.59500 -13.52336 -13.45451 -12.99758 -12.92880 -12.75902 -12.45087 -12.35907 -12.03766 -11.94461 -11.78628 -11.52003 -10.87643 -10.77197 -10.68837 -10.56328 -10.52455 -10.14265 -5.10696 -0.64975 -0.30044 0.05041 1.05116 1.42556 1.61076 1.80653 1.86903 2.32552 2.52718 2.73943 3.18129 3.24230 3.34620 3.35464 3.46373 3.58390 3.69453 3.77426 3.78077 3.92567 4.06196 4.13744 4.18057 4.29589 4.43658 4.49089 4.61844 4.68200 4.74181 4.79842 4.88338 4.92137 5.03283 5.18963 5.23409 5.63829 5.76652 5.80984 6.31797 6.36686 7.26624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.527 3.473 3 O -0.541 6.541 4 C -0.143 4.143 5 H 0.115 0.885 6 C -0.133 4.133 7 C 0.127 3.873 8 H 0.108 0.892 9 N -1.101 6.101 10 S 2.686 3.314 11 O -0.957 6.957 12 O -0.923 6.923 13 C -0.656 4.656 14 C -0.012 4.012 15 C -0.112 4.112 16 O -0.489 6.489 17 Si 0.694 3.306 18 C -0.145 4.145 19 C -0.056 4.056 20 C -0.134 4.134 21 C -0.022 4.022 22 C -0.123 4.123 23 H 0.402 0.598 24 H 0.402 0.598 25 H 0.100 0.900 26 H 0.087 0.913 27 H 0.419 0.581 28 H 0.118 0.882 29 H 0.371 0.629 30 H -0.249 1.249 31 H -0.255 1.255 32 H 0.137 0.863 33 H 0.135 0.865 34 H 0.136 0.864 35 H 0.146 0.854 36 H 0.085 0.915 37 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.695 2.865 0.350 2.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.311 3.689 3 O -0.417 6.417 4 C -0.165 4.165 5 H 0.133 0.867 6 C -0.173 4.173 7 C 0.019 3.981 8 H 0.126 0.874 9 N -0.860 5.860 10 S 2.775 3.225 11 O -0.947 6.947 12 O -0.913 6.913 13 C -0.742 4.742 14 C -0.014 4.014 15 C -0.222 4.222 16 O -0.294 6.294 17 Si 0.594 3.406 18 C -0.163 4.163 19 C -0.075 4.075 20 C -0.152 4.152 21 C -0.041 4.041 22 C -0.163 4.163 23 H 0.231 0.769 24 H 0.232 0.768 25 H 0.118 0.882 26 H 0.106 0.894 27 H 0.255 0.745 28 H 0.135 0.865 29 H 0.218 0.782 30 H -0.174 1.174 31 H -0.180 1.180 32 H 0.154 0.846 33 H 0.153 0.847 34 H 0.154 0.846 35 H 0.164 0.836 36 H 0.103 0.897 37 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 0.844 2.677 0.566 2.863 hybrid contribution 0.188 -0.779 0.257 0.841 sum 1.032 1.899 0.823 2.312 Atomic orbital electron populations 1.43925 1.07371 1.12661 1.77860 1.20467 0.82566 0.91136 0.74713 1.90764 1.68237 1.33492 1.49243 1.22834 0.97476 0.95468 1.00683 0.86657 1.23367 0.97439 1.01258 0.95222 1.21605 0.98369 0.82322 0.95828 0.87376 1.55555 1.66172 1.26553 1.37711 1.02356 0.73446 0.72938 0.73800 1.93601 1.80250 1.85325 1.35537 1.93741 1.85995 1.47240 1.64303 1.30797 1.26160 1.18597 0.98644 1.19916 0.94339 0.93218 0.93915 1.25406 1.07513 0.89297 0.99958 1.86966 1.33244 1.17098 1.92052 0.94825 0.77898 0.90464 0.77417 1.21311 0.94424 1.01431 0.99126 1.21490 0.99939 0.93844 0.92185 1.21409 0.94716 1.00100 0.99010 1.21096 0.94987 0.91539 0.96513 1.23298 0.93134 0.99091 1.00744 0.76934 0.76764 0.88190 0.89436 0.74511 0.86453 0.78190 1.17391 1.17955 0.84600 0.84682 0.84581 0.83638 0.89671 0.87034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.86 2.53 8.87 31.22 0.28 2.81 16 2 C 0.53 -0.06 7.63 -10.99 -0.08 -0.14 16 3 O -0.54 -2.37 16.74 5.55 0.09 -2.28 16 4 C -0.14 0.40 3.97 -90.96 -0.36 0.04 16 5 H 0.12 -0.55 8.10 -51.93 -0.42 -0.97 16 6 C -0.13 0.37 7.43 -25.92 -0.19 0.17 16 7 C 0.13 -0.33 4.43 -67.12 -0.30 -0.63 16 8 H 0.11 -0.33 8.05 -51.92 -0.42 -0.75 16 9 N -1.10 2.26 4.42 -4.20 -0.02 2.24 16 10 S 2.69 4.01 4.92 -107.50 -0.53 3.48 16 11 O -0.96 -3.87 16.77 -57.17 -0.96 -4.83 16 12 O -0.92 -4.26 15.01 -66.43 -1.00 -5.26 16 13 C -0.66 -0.41 5.84 -39.58 -0.23 -0.64 16 14 C -0.01 0.00 5.27 -104.63 -0.55 -0.55 16 15 C -0.11 0.06 1.88 36.00 0.07 0.13 16 16 O -0.49 -0.86 10.58 -57.79 -0.61 -1.47 16 17 Si 0.69 -1.32 30.20 -169.99 -5.13 -6.45 16 18 C -0.14 0.19 8.66 -39.58 -0.34 -0.16 16 19 C -0.06 0.10 10.05 -39.59 -0.40 -0.30 16 20 C -0.13 0.17 10.05 -39.58 -0.40 -0.22 16 21 C -0.02 0.00 9.55 -39.58 -0.38 -0.38 16 22 C -0.12 0.33 7.19 -25.92 -0.19 0.14 16 23 H 0.40 -2.27 8.83 -40.82 -0.36 -2.63 16 24 H 0.40 -1.26 8.93 -40.82 -0.36 -1.63 16 25 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 26 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 27 H 0.42 -1.61 8.51 -34.47 -0.29 -1.90 16 28 H 0.12 -0.24 5.84 -51.92 -0.30 -0.54 16 29 H 0.37 -0.42 8.60 45.56 0.39 -0.03 16 30 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 31 H -0.25 0.12 6.66 56.52 0.38 0.50 16 32 H 0.14 -0.38 4.87 -52.49 -0.26 -0.64 16 33 H 0.14 -0.55 8.06 -52.49 -0.42 -0.98 16 34 H 0.14 -0.46 8.06 -52.49 -0.42 -0.88 16 35 H 0.15 -0.10 7.34 -52.48 -0.39 -0.48 16 36 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 37 H 0.11 -0.16 7.44 -51.93 -0.39 -0.55 16 LS Contribution 320.20 15.07 4.83 4.83 Total: 0.00 -12.42 320.20 -10.53 -22.95 By element: Atomic # 1 Polarization: -9.35 SS G_CDS: -4.13 Total: -13.48 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: -3.35 Total: -2.53 kcal Atomic # 7 Polarization: 4.79 SS G_CDS: 0.26 Total: 5.05 kcal Atomic # 8 Polarization: -11.37 SS G_CDS: -2.47 Total: -13.84 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.13 Total: -6.45 kcal Atomic # 16 Polarization: 4.01 SS G_CDS: -0.53 Total: 3.48 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -12.42 -10.53 -22.95 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_12220720_2726874.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.764 kcal (2) G-P(sol) polarization free energy of solvation -12.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.534 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.952 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.716 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds