Wall clock time and date at job start Fri Mar 5 2021 23:01:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45195 * 109.47241 * 2 1 4 4 C 1.34233 * 117.00242 * 180.02562 * 3 2 1 5 5 O 1.20825 * 119.99831 * 0.02562 * 4 3 2 6 6 C 1.50700 * 119.99891 * 180.02562 * 4 3 2 7 7 H 1.08992 * 112.84819 * 48.81045 * 6 4 3 8 8 C 1.53785 * 113.60979 * 180.02562 * 6 4 3 9 9 C 1.53780 * 87.08264 * 89.19934 * 8 6 4 10 10 F 1.39895 * 113.61572 * 270.79889 * 9 8 6 11 11 C 1.52993 * 113.61288 * 139.97811 * 9 8 6 12 12 S 1.81401 * 109.47253 * 185.00233 * 11 9 8 13 13 O 1.42097 * 110.54474 * 68.37149 * 12 11 9 14 14 O 1.42110 * 110.53923 * 291.62387 * 12 11 9 15 15 O 1.52194 * 104.45251 * 180.02562 * 12 11 9 16 16 C 1.36016 * 114.00200 * 74.99500 * 15 12 11 17 17 C 1.39373 * 120.07735 * 90.00535 * 16 15 12 18 18 S 1.76191 * 120.09808 * 359.95095 * 17 16 15 19 19 C 1.81398 * 102.99989 * 180.02562 * 18 17 16 20 20 C 1.38796 * 119.80544 * 179.97438 * 17 16 15 21 21 C 1.38199 * 119.97235 * 0.28037 * 20 17 16 22 22 C 1.50703 * 119.91165 * 179.72171 * 21 20 17 23 23 O 1.42902 * 109.47391 * 64.99976 * 22 21 20 24 24 Si 1.86303 * 109.47021 * 184.99392 * 22 21 20 25 25 C 1.38265 * 120.16816 * 359.43722 * 21 20 17 26 26 C 1.38302 * 120.19190 * 0.55942 * 25 21 20 27 27 C 1.53778 * 87.08153 * 25.43160 * 9 8 6 28 28 H 1.09000 * 109.47496 * 59.99907 * 1 2 3 29 29 H 1.09000 * 109.47527 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.47365 * 299.99847 * 1 2 3 31 31 H 1.09008 * 109.46876 * 240.00343 * 2 1 3 32 32 H 1.09006 * 109.47182 * 120.00396 * 2 1 3 33 33 H 1.09007 * 113.61287 * 334.65055 * 8 6 4 34 34 H 1.09004 * 113.68518 * 203.76127 * 8 6 4 35 35 H 1.09006 * 109.47410 * 65.00193 * 11 9 8 36 36 H 1.09001 * 109.47506 * 304.99893 * 11 9 8 37 37 H 1.08993 * 109.47563 * 300.00002 * 19 18 17 38 38 H 1.08998 * 109.47124 * 60.00583 * 19 18 17 39 39 H 1.09004 * 109.47266 * 180.02562 * 19 18 17 40 40 H 1.08002 * 120.00811 * 179.97438 * 20 17 16 41 41 H 1.08995 * 109.47285 * 304.99336 * 22 21 20 42 42 H 0.96698 * 113.99966 * 59.99281 * 23 22 21 43 43 H 1.48503 * 109.99800 * 58.67706 * 24 22 21 44 44 H 1.48503 * 110.00184 * 179.97438 * 24 22 21 45 45 H 1.08001 * 119.90360 * 180.31024 * 25 21 20 46 46 H 1.07993 * 119.99283 * 179.69437 * 26 25 21 47 47 H 1.09002 * 113.61658 * 89.11398 * 27 9 8 48 48 H 1.08995 * 113.61574 * 220.02284 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0015 6 6 3.9207 2.9374 0.0000 7 1 3.4715 3.5808 0.7565 8 6 5.4582 2.9680 -0.0013 9 6 5.3790 2.9462 -1.5369 10 9 5.3578 1.6566 -2.0787 11 6 6.4014 3.8593 -2.2164 12 16 6.1140 3.8616 -4.0075 13 8 4.8874 4.5099 -4.3149 14 8 6.4325 2.5939 -4.5652 15 8 7.1813 4.7940 -4.5622 16 6 8.4292 4.2534 -4.5875 17 6 8.8638 3.5516 -5.7105 18 16 7.7980 3.3611 -7.1005 19 6 8.8077 2.3984 -8.2599 20 6 10.1385 3.0028 -5.7304 21 6 10.9701 3.1484 -4.6363 22 6 12.3516 2.5466 -4.6569 23 8 13.1367 3.1903 -5.6626 24 14 13.1572 2.7838 -2.9939 25 6 10.5400 3.8498 -3.5251 26 6 9.2712 4.3996 -3.4978 27 6 3.9850 3.5800 -1.3957 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3634 0.5138 0.8900 31 1 1.8933 -0.5138 -0.8901 32 1 1.8933 -0.5139 0.8900 33 1 5.9131 2.0739 0.4252 34 1 5.8782 3.8899 0.4012 35 1 7.4078 3.4947 -2.0103 36 1 6.2962 4.8732 -1.8303 37 1 9.7142 2.9537 -8.5002 38 1 9.0755 1.4454 -7.8038 39 1 8.2400 2.2178 -9.1728 40 1 10.4785 2.4580 -6.5988 41 1 12.2807 1.4816 -4.8777 42 1 13.2421 4.1423 -5.5298 43 1 12.3339 2.1463 -1.9352 44 1 14.5201 2.1941 -3.0010 45 1 11.1952 3.9653 -2.6743 46 1 8.9368 4.9426 -2.6263 47 1 4.0009 4.6697 -1.3743 48 1 3.2506 3.1800 -2.0947 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_13446746_15494190.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:01:25 Heat of formation + Delta-G solvation = -189.660771 kcal Electronic energy + Delta-G solvation = -37890.439530 eV Core-core repulsion = 32662.042932 eV Total energy + Delta-G solvation = -5228.396598 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.089 amu Computer time = 2.73 seconds Orbital eigenvalues (eV) -49.02376 -42.31143 -41.74584 -39.99429 -39.33323 -38.23892 -37.54821 -37.34583 -37.09758 -33.03505 -32.77934 -32.42752 -31.91715 -29.99766 -27.39854 -27.07266 -26.74862 -24.72265 -24.06584 -23.66240 -22.57260 -21.74569 -20.68823 -19.70280 -19.17534 -18.93820 -18.70582 -18.47172 -17.81553 -17.74874 -17.52815 -17.19335 -17.10478 -16.70825 -16.57362 -16.34047 -16.03257 -15.81597 -15.50074 -15.35866 -15.14089 -14.94177 -14.76724 -14.67585 -14.55486 -14.41466 -14.23644 -14.12989 -13.92140 -13.82532 -13.69581 -13.60595 -13.37047 -13.27084 -13.17924 -13.03991 -12.94073 -12.89217 -12.70019 -12.51991 -12.42403 -12.31979 -12.03114 -11.76184 -11.49200 -11.48347 -11.41718 -11.39443 -11.08680 -10.66058 -10.23591 -8.53636 -5.20688 -1.22247 -0.29072 -0.20635 0.26142 0.96722 1.06427 1.14739 1.24190 1.47923 1.55254 1.83740 2.03514 2.38068 2.60818 2.70603 2.74590 2.98344 3.09651 3.16702 3.20363 3.29362 3.35471 3.48860 3.64268 3.76050 3.82681 3.90387 3.97104 3.99059 4.00952 4.02895 4.03075 4.18821 4.20187 4.23126 4.32431 4.32957 4.39575 4.48424 4.50176 4.58649 4.62603 4.66309 4.73486 4.78705 4.83328 4.87894 4.96610 5.04332 5.34879 5.47776 6.36070 6.75445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.354 6.354 4 C 0.473 3.527 5 O -0.489 6.489 6 C -0.112 4.112 7 H 0.132 0.868 8 C -0.124 4.124 9 C 0.097 3.903 10 F -0.165 7.165 11 C -0.678 4.678 12 S 2.582 3.418 13 O -0.912 6.912 14 O -0.916 6.916 15 O -0.653 6.653 16 C 0.076 3.924 17 C -0.058 4.058 18 S -0.065 6.065 19 C -0.155 4.155 20 C -0.096 4.096 21 C -0.078 4.078 22 C -0.074 4.074 23 O -0.536 6.536 24 Si 0.689 3.311 25 C -0.110 4.110 26 C -0.103 4.103 27 C -0.148 4.148 28 H 0.068 0.932 29 H 0.082 0.918 30 H 0.067 0.933 31 H 0.072 0.928 32 H 0.072 0.928 33 H 0.105 0.895 34 H 0.121 0.879 35 H 0.150 0.850 36 H 0.160 0.840 37 H 0.091 0.909 38 H 0.091 0.909 39 H 0.117 0.883 40 H 0.144 0.856 41 H 0.120 0.880 42 H 0.381 0.619 43 H -0.253 1.253 44 H -0.251 1.251 45 H 0.146 0.854 46 H 0.151 0.849 47 H 0.129 0.871 48 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.099 4.475 3.867 6.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.315 3.685 5 O -0.375 6.375 6 C -0.131 4.131 7 H 0.149 0.851 8 C -0.162 4.162 9 C 0.077 3.923 10 F -0.145 7.145 11 C -0.802 4.802 12 S 2.674 3.326 13 O -0.910 6.910 14 O -0.915 6.915 15 O -0.612 6.612 16 C 0.027 3.973 17 C -0.174 4.174 18 S 0.182 5.818 19 C -0.323 4.323 20 C -0.120 4.120 21 C -0.081 4.081 22 C -0.184 4.184 23 O -0.341 6.341 24 Si 0.590 3.410 25 C -0.131 4.131 26 C -0.124 4.124 27 C -0.186 4.186 28 H 0.087 0.913 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.123 0.877 34 H 0.140 0.860 35 H 0.168 0.832 36 H 0.178 0.822 37 H 0.110 0.890 38 H 0.110 0.890 39 H 0.135 0.865 40 H 0.162 0.838 41 H 0.138 0.862 42 H 0.229 0.771 43 H -0.177 1.177 44 H -0.175 1.175 45 H 0.163 0.837 46 H 0.168 0.832 47 H 0.148 0.852 48 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 2.116 3.509 3.278 5.247 hybrid contribution 0.914 -0.929 0.450 1.379 sum 3.030 2.580 3.728 5.453 Atomic orbital electron populations 1.21824 0.92212 1.03319 1.03712 1.23122 0.95649 0.79574 1.02913 1.86475 1.23837 1.33000 1.83807 1.22860 0.81062 0.91575 0.73020 1.90717 1.60389 1.42491 1.43869 1.21974 0.97558 0.92260 1.01277 0.85056 1.23560 0.93712 1.06312 0.92615 1.21400 0.95435 0.79511 0.95907 1.93047 1.97117 1.37771 1.86556 1.31398 1.09760 1.09570 1.29461 1.06232 0.74906 0.74455 0.76966 1.93666 1.40746 1.74842 1.81784 1.93739 1.81979 1.43299 1.72442 1.85792 1.27778 1.62579 1.85062 1.17348 0.82440 1.01501 0.95990 1.22085 0.98325 0.99168 0.97864 1.85929 1.21192 1.66030 1.08648 1.23865 1.03788 1.03025 1.01628 1.21024 0.90977 1.00189 0.99806 1.20502 0.96866 0.97083 0.93691 1.25189 0.89279 0.99437 1.04534 1.86538 1.71497 1.26361 1.49716 0.94840 0.80243 0.91223 0.74674 1.20875 0.95483 0.98420 0.98296 1.21195 0.94012 0.99822 0.97365 1.23849 0.95404 1.03278 0.96032 0.91270 0.89935 0.91348 0.90913 0.91008 0.87669 0.86042 0.83181 0.82165 0.89030 0.89030 0.86475 0.83794 0.86248 0.77091 1.17712 1.17519 0.83672 0.83157 0.85239 0.88022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 33. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 10.29 37.15 0.38 0.52 16 2 C 0.06 0.07 6.19 37.15 0.23 0.30 16 3 O -0.35 -0.88 10.22 -39.27 -0.40 -1.28 16 4 C 0.47 1.37 6.93 36.01 0.25 1.62 16 5 O -0.49 -2.82 14.48 -18.75 -0.27 -3.09 16 6 C -0.11 0.08 4.45 -90.96 -0.40 -0.32 16 7 H 0.13 -0.48 8.14 -51.93 -0.42 -0.91 16 8 C -0.12 0.20 6.93 -25.92 -0.18 0.02 16 9 C 0.10 0.07 1.56 -89.81 -0.14 -0.07 16 10 F -0.16 -0.81 14.84 2.25 0.03 -0.78 16 11 C -0.68 0.98 5.12 37.15 0.19 1.17 16 12 S 2.58 8.41 4.87 -107.50 -0.52 7.89 16 13 O -0.91 -5.19 17.96 -67.03 -1.20 -6.39 16 14 O -0.92 -5.43 14.59 -67.04 -0.98 -6.41 16 15 O -0.65 -1.71 9.45 -52.12 -0.49 -2.21 16 16 C 0.08 0.14 4.80 -39.07 -0.19 -0.05 16 17 C -0.06 -0.14 5.49 -38.95 -0.21 -0.36 16 18 S -0.06 -0.21 20.62 -107.50 -2.22 -2.43 16 19 C -0.15 0.13 9.15 101.05 0.92 1.05 16 20 C -0.10 -0.04 9.00 -39.39 -0.35 -0.40 16 21 C -0.08 0.09 5.35 -104.62 -0.56 -0.47 16 22 C -0.07 0.14 2.80 36.01 0.10 0.25 16 23 O -0.54 0.86 12.83 -35.23 -0.45 0.41 16 24 Si 0.69 -2.00 29.80 -169.99 -5.06 -7.06 16 25 C -0.11 0.27 8.66 -39.55 -0.34 -0.07 16 26 C -0.10 0.18 8.46 -39.47 -0.33 -0.16 16 27 C -0.15 0.09 6.94 -25.92 -0.18 -0.09 16 28 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.07 0.12 8.13 -51.92 -0.42 -0.30 16 32 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 33 H 0.10 -0.01 7.43 -51.93 -0.39 -0.39 16 34 H 0.12 -0.64 8.10 -51.93 -0.42 -1.06 16 35 H 0.15 -0.52 6.60 -51.92 -0.34 -0.86 16 36 H 0.16 -0.90 8.05 -51.92 -0.42 -1.32 16 37 H 0.09 -0.20 7.75 -51.93 -0.40 -0.60 16 38 H 0.09 -0.12 7.75 -51.93 -0.40 -0.53 16 39 H 0.12 -0.24 8.14 -51.92 -0.42 -0.66 16 40 H 0.14 -0.11 5.88 -52.49 -0.31 -0.42 16 41 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 42 H 0.38 -2.10 8.70 45.56 0.40 -1.71 16 43 H -0.25 0.18 7.11 56.52 0.40 0.58 16 44 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 45 H 0.15 -0.79 4.89 -52.49 -0.26 -1.05 16 46 H 0.15 -0.83 7.49 -52.49 -0.39 -1.22 16 47 H 0.13 -0.48 8.03 -51.93 -0.42 -0.90 16 48 H 0.10 0.06 8.10 -51.93 -0.42 -0.36 16 LS Contribution 419.69 15.07 6.32 6.32 Total: 0.00 -13.67 419.69 -12.41 -26.08 By element: Atomic # 1 Polarization: -7.66 SS G_CDS: -6.34 Total: -14.00 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: -0.82 Total: 2.95 kcal Atomic # 8 Polarization: -15.17 SS G_CDS: -3.80 Total: -18.97 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 0.03 Total: -0.78 kcal Atomic # 14 Polarization: -2.00 SS G_CDS: -5.06 Total: -7.06 kcal Atomic # 16 Polarization: 8.20 SS G_CDS: -2.74 Total: 5.46 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -13.67 -12.41 -26.08 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_13446746_15494190.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -163.585 kcal (2) G-P(sol) polarization free energy of solvation -13.670 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -177.255 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.076 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.661 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.73 seconds