Wall clock time and date at job start Fri Mar 5 2021 23:01:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45195 * 109.47241 * 2 1 4 4 C 1.34233 * 117.00242 * 180.02562 * 3 2 1 5 5 O 1.20825 * 119.99831 * 0.02562 * 4 3 2 6 6 C 1.50700 * 119.99891 * 180.02562 * 4 3 2 7 7 H 1.08992 * 112.84819 * 48.81045 * 6 4 3 8 8 C 1.53785 * 113.60979 * 180.02562 * 6 4 3 9 9 C 1.53780 * 87.08264 * 89.19934 * 8 6 4 10 10 F 1.39895 * 113.61572 * 270.79889 * 9 8 6 11 11 C 1.52993 * 113.61288 * 139.97811 * 9 8 6 12 12 S 1.81401 * 109.47253 * 185.00233 * 11 9 8 13 13 O 1.42097 * 110.54474 * 68.37149 * 12 11 9 14 14 O 1.42110 * 110.53923 * 291.62387 * 12 11 9 15 15 O 1.52194 * 104.45251 * 180.02562 * 12 11 9 16 16 C 1.36016 * 114.00200 * 74.99500 * 15 12 11 17 17 C 1.39373 * 120.07735 * 90.00535 * 16 15 12 18 18 S 1.76191 * 120.09808 * 359.95095 * 17 16 15 19 19 C 1.81398 * 102.99989 * 180.02562 * 18 17 16 20 20 C 1.38796 * 119.80544 * 179.97438 * 17 16 15 21 21 C 1.38199 * 119.97235 * 0.28037 * 20 17 16 22 22 C 1.50703 * 119.91165 * 179.72171 * 21 20 17 23 23 O 1.42902 * 109.47391 * 64.99976 * 22 21 20 24 24 Si 1.86303 * 109.47021 * 184.99392 * 22 21 20 25 25 C 1.38265 * 120.16816 * 359.43722 * 21 20 17 26 26 C 1.38302 * 120.19190 * 0.55942 * 25 21 20 27 27 C 1.53778 * 87.08153 * 25.43160 * 9 8 6 28 28 H 1.09000 * 109.47496 * 59.99907 * 1 2 3 29 29 H 1.09000 * 109.47527 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.47365 * 299.99847 * 1 2 3 31 31 H 1.09008 * 109.46876 * 240.00343 * 2 1 3 32 32 H 1.09006 * 109.47182 * 120.00396 * 2 1 3 33 33 H 1.09007 * 113.61287 * 334.65055 * 8 6 4 34 34 H 1.09004 * 113.68518 * 203.76127 * 8 6 4 35 35 H 1.09006 * 109.47410 * 65.00193 * 11 9 8 36 36 H 1.09001 * 109.47506 * 304.99893 * 11 9 8 37 37 H 1.08993 * 109.47563 * 300.00002 * 19 18 17 38 38 H 1.08998 * 109.47124 * 60.00583 * 19 18 17 39 39 H 1.09004 * 109.47266 * 180.02562 * 19 18 17 40 40 H 1.08002 * 120.00811 * 179.97438 * 20 17 16 41 41 H 1.08995 * 109.47285 * 304.99336 * 22 21 20 42 42 H 0.96698 * 113.99966 * 59.99281 * 23 22 21 43 43 H 1.48503 * 109.99800 * 58.67706 * 24 22 21 44 44 H 1.48503 * 110.00184 * 179.97438 * 24 22 21 45 45 H 1.08001 * 119.90360 * 180.31024 * 25 21 20 46 46 H 1.07993 * 119.99283 * 179.69437 * 26 25 21 47 47 H 1.09002 * 113.61658 * 89.11398 * 27 9 8 48 48 H 1.08995 * 113.61574 * 220.02284 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0015 6 6 3.9207 2.9374 0.0000 7 1 3.4715 3.5808 0.7565 8 6 5.4582 2.9680 -0.0013 9 6 5.3790 2.9462 -1.5369 10 9 5.3578 1.6566 -2.0787 11 6 6.4014 3.8593 -2.2164 12 16 6.1140 3.8616 -4.0075 13 8 4.8874 4.5099 -4.3149 14 8 6.4325 2.5939 -4.5652 15 8 7.1813 4.7940 -4.5622 16 6 8.4292 4.2534 -4.5875 17 6 8.8638 3.5516 -5.7105 18 16 7.7980 3.3611 -7.1005 19 6 8.8077 2.3984 -8.2599 20 6 10.1385 3.0028 -5.7304 21 6 10.9701 3.1484 -4.6363 22 6 12.3516 2.5466 -4.6569 23 8 13.1367 3.1903 -5.6626 24 14 13.1572 2.7838 -2.9939 25 6 10.5400 3.8498 -3.5251 26 6 9.2712 4.3996 -3.4978 27 6 3.9850 3.5800 -1.3957 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3634 0.5138 0.8900 31 1 1.8933 -0.5138 -0.8901 32 1 1.8933 -0.5139 0.8900 33 1 5.9131 2.0739 0.4252 34 1 5.8782 3.8899 0.4012 35 1 7.4078 3.4947 -2.0103 36 1 6.2962 4.8732 -1.8303 37 1 9.7142 2.9537 -8.5002 38 1 9.0755 1.4454 -7.8038 39 1 8.2400 2.2178 -9.1728 40 1 10.4785 2.4580 -6.5988 41 1 12.2807 1.4816 -4.8777 42 1 13.2421 4.1423 -5.5298 43 1 12.3339 2.1463 -1.9352 44 1 14.5201 2.1941 -3.0010 45 1 11.1952 3.9653 -2.6743 46 1 8.9368 4.9426 -2.6263 47 1 4.0009 4.6697 -1.3743 48 1 3.2506 3.1800 -2.0947 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_13446746_15494190.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:01:24 Heat of formation + Delta-G solvation = -193.718990 kcal Electronic energy + Delta-G solvation = -37890.615508 eV Core-core repulsion = 32662.042932 eV Total energy + Delta-G solvation = -5228.572575 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.089 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -49.15392 -42.32029 -41.87558 -39.93192 -39.32278 -38.46912 -37.55530 -37.43522 -37.30745 -32.97734 -32.78168 -32.35248 -31.85668 -29.95816 -27.24164 -26.98890 -26.74910 -24.64406 -24.08587 -23.62618 -22.63373 -21.76941 -20.70747 -19.76876 -19.22233 -19.01477 -18.74718 -18.52687 -17.88889 -17.77641 -17.52074 -17.23964 -17.15109 -16.73609 -16.57024 -16.29280 -16.10405 -15.77026 -15.40100 -15.31371 -15.22529 -14.91538 -14.76682 -14.69163 -14.52247 -14.45228 -14.25875 -14.09629 -13.81949 -13.77173 -13.64644 -13.49537 -13.43815 -13.41983 -13.26561 -13.24398 -12.99945 -12.84311 -12.64224 -12.56890 -12.39161 -12.20125 -11.92940 -11.67908 -11.62760 -11.56793 -11.54989 -11.38105 -11.02837 -10.51573 -10.16368 -8.68916 -4.98578 -1.30667 -0.26067 -0.11271 0.21294 0.90969 0.99034 1.16802 1.31337 1.52515 1.67451 2.02495 2.12875 2.34309 2.71054 2.72300 2.81304 2.99358 3.19715 3.30212 3.34919 3.44068 3.51305 3.61546 3.70957 3.88738 3.90914 3.95353 3.98185 4.02132 4.08241 4.11351 4.17588 4.25234 4.32095 4.36726 4.44916 4.51201 4.56102 4.61683 4.64615 4.65428 4.73574 4.75899 4.81084 4.84044 4.87296 5.01921 5.07789 5.08508 5.37792 5.47549 6.58859 6.74270 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.463 3.537 5 O -0.527 6.527 6 C -0.112 4.112 7 H 0.169 0.831 8 C -0.108 4.108 9 C 0.068 3.932 10 F -0.200 7.200 11 C -0.650 4.650 12 S 2.566 3.434 13 O -0.955 6.955 14 O -0.961 6.961 15 O -0.657 6.657 16 C 0.049 3.951 17 C -0.076 4.076 18 S -0.150 6.150 19 C -0.136 4.136 20 C -0.107 4.107 21 C -0.078 4.078 22 C -0.084 4.084 23 O -0.552 6.552 24 Si 0.790 3.210 25 C -0.101 4.101 26 C -0.095 4.095 27 C -0.152 4.152 28 H 0.066 0.934 29 H 0.096 0.904 30 H 0.074 0.926 31 H 0.060 0.940 32 H 0.072 0.928 33 H 0.087 0.913 34 H 0.174 0.826 35 H 0.177 0.823 36 H 0.215 0.785 37 H 0.105 0.895 38 H 0.094 0.906 39 H 0.127 0.873 40 H 0.146 0.854 41 H 0.110 0.890 42 H 0.398 0.602 43 H -0.273 1.273 44 H -0.303 1.303 45 H 0.183 0.817 46 H 0.198 0.802 47 H 0.169 0.831 48 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.617 6.797 6.964 10.771 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.020 4.020 3 O -0.276 6.276 4 C 0.306 3.694 5 O -0.416 6.416 6 C -0.131 4.131 7 H 0.187 0.813 8 C -0.146 4.146 9 C 0.048 3.952 10 F -0.180 7.180 11 C -0.779 4.779 12 S 2.665 3.335 13 O -0.953 6.953 14 O -0.959 6.959 15 O -0.616 6.616 16 C 0.000 4.000 17 C -0.192 4.192 18 S 0.096 5.904 19 C -0.304 4.304 20 C -0.131 4.131 21 C -0.082 4.082 22 C -0.193 4.193 23 O -0.361 6.361 24 Si 0.694 3.306 25 C -0.121 4.121 26 C -0.116 4.116 27 C -0.189 4.189 28 H 0.085 0.915 29 H 0.115 0.885 30 H 0.093 0.907 31 H 0.078 0.922 32 H 0.090 0.910 33 H 0.105 0.895 34 H 0.192 0.808 35 H 0.195 0.805 36 H 0.232 0.768 37 H 0.123 0.877 38 H 0.113 0.887 39 H 0.145 0.855 40 H 0.163 0.837 41 H 0.128 0.872 42 H 0.249 0.751 43 H -0.199 1.199 44 H -0.231 1.231 45 H 0.200 0.800 46 H 0.215 0.785 47 H 0.187 0.813 48 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 3.595 5.860 6.300 9.325 hybrid contribution 0.550 -1.724 -0.491 1.875 sum 4.145 4.136 5.809 8.248 Atomic orbital electron populations 1.21826 0.90423 1.04341 1.03860 1.23261 0.97117 0.79329 1.02325 1.86491 1.24110 1.33465 1.83570 1.23837 0.80795 0.93053 0.71674 1.90693 1.61032 1.44148 1.45726 1.22177 0.98559 0.90150 1.02210 0.81345 1.23713 0.92793 1.08020 0.90026 1.21998 0.96920 0.78393 0.97902 1.92981 1.97328 1.40432 1.87273 1.31256 1.10688 1.12482 1.23479 1.06326 0.74372 0.73443 0.79314 1.93603 1.42787 1.75188 1.83754 1.93685 1.82257 1.44925 1.75038 1.85757 1.28194 1.61926 1.85716 1.17871 0.82563 1.02425 0.97104 1.22163 0.98617 1.00776 0.97606 1.86075 1.24767 1.67931 1.11659 1.23876 1.03542 1.02426 1.00580 1.21154 0.90712 1.00412 1.00803 1.20707 0.96822 0.96987 0.93650 1.25434 0.89096 0.99055 1.05701 1.86506 1.71401 1.27991 1.50163 0.93797 0.75609 0.89436 0.71741 1.21321 0.95617 0.96640 0.98548 1.21750 0.93395 0.98977 0.97437 1.24058 0.94070 1.05365 0.95416 0.91481 0.88510 0.90730 0.92202 0.90977 0.89454 0.80833 0.80503 0.76770 0.87660 0.88713 0.85484 0.83670 0.87225 0.75127 1.19889 1.23132 0.80036 0.78533 0.81345 0.90486 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.18 10.29 71.98 0.74 0.92 16 2 C 0.05 0.22 6.19 71.98 0.45 0.66 16 3 O -0.36 -2.21 10.22 -51.45 -0.53 -2.73 16 4 C 0.46 3.07 6.93 71.24 0.49 3.56 16 5 O -0.53 -7.11 14.48 21.97 0.32 -6.79 16 6 C -0.11 0.37 4.45 -11.01 -0.05 0.32 16 7 H 0.17 -1.85 8.14 -2.39 -0.02 -1.87 16 8 C -0.11 0.66 6.93 31.12 0.22 0.88 16 9 C 0.07 0.02 1.56 -10.27 -0.02 0.00 16 10 F -0.20 -2.34 14.84 44.97 0.67 -1.67 16 11 C -0.65 3.63 5.12 71.98 0.37 4.00 16 12 S 2.57 19.41 4.87 -56.49 -0.28 19.14 16 13 O -0.96 -12.89 17.96 -118.57 -2.13 -15.02 16 14 O -0.96 -14.35 14.59 -118.57 -1.73 -16.08 16 15 O -0.66 -3.90 9.45 -62.82 -0.59 -4.49 16 16 C 0.05 0.17 4.80 22.60 0.11 0.28 16 17 C -0.08 -0.49 5.49 22.68 0.12 -0.37 16 18 S -0.15 -1.47 20.62 -56.49 -1.16 -2.63 16 19 C -0.14 -0.07 9.15 113.37 1.04 0.97 16 20 C -0.11 -0.19 9.00 22.39 0.20 0.02 16 21 C -0.08 0.26 5.35 -19.87 -0.11 0.15 16 22 C -0.08 0.39 2.80 71.24 0.20 0.59 16 23 O -0.55 2.11 12.83 -148.98 -1.91 0.20 16 24 Si 0.79 -6.01 29.80 68.60 2.04 -3.97 16 25 C -0.10 0.79 8.66 22.29 0.19 0.99 16 26 C -0.09 0.59 8.46 22.34 0.19 0.78 16 27 C -0.15 0.36 6.94 31.12 0.22 0.58 16 28 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 29 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 30 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.06 0.37 8.13 -2.38 -0.02 0.35 16 32 H 0.07 0.26 8.14 -2.38 -0.02 0.24 16 33 H 0.09 -0.14 7.43 -2.38 -0.02 -0.15 16 34 H 0.17 -2.94 8.10 -2.38 -0.02 -2.96 16 35 H 0.18 -1.92 6.60 -2.39 -0.02 -1.94 16 36 H 0.22 -3.64 8.05 -2.39 -0.02 -3.65 16 37 H 0.10 -0.29 7.75 -2.39 -0.02 -0.31 16 38 H 0.09 -0.04 7.75 -2.39 -0.02 -0.06 16 39 H 0.13 -0.27 8.14 -2.39 -0.02 -0.29 16 40 H 0.15 0.01 5.88 -2.91 -0.02 -0.01 16 41 H 0.11 -0.32 7.96 -2.39 -0.02 -0.34 16 42 H 0.40 -4.89 8.70 -74.06 -0.64 -5.53 16 43 H -0.27 1.10 7.11 99.48 0.71 1.80 16 44 H -0.30 -0.39 7.11 99.48 0.71 0.32 16 45 H 0.18 -2.83 4.89 -2.91 -0.01 -2.84 16 46 H 0.20 -3.24 7.49 -2.91 -0.02 -3.26 16 47 H 0.17 -1.83 8.03 -2.39 -0.02 -1.85 16 48 H 0.08 0.21 8.10 -2.39 -0.02 0.19 16 Total: 0.00 -42.02 419.69 -0.53 -42.55 By element: Atomic # 1 Polarization: -23.26 SS G_CDS: 0.41 Total: -22.85 kcal Atomic # 6 Polarization: 9.98 SS G_CDS: 4.36 Total: 14.34 kcal Atomic # 8 Polarization: -38.33 SS G_CDS: -6.57 Total: -44.90 kcal Atomic # 9 Polarization: -2.34 SS G_CDS: 0.67 Total: -1.67 kcal Atomic # 14 Polarization: -6.01 SS G_CDS: 2.04 Total: -3.97 kcal Atomic # 16 Polarization: 17.95 SS G_CDS: -1.44 Total: 16.51 kcal Total: -42.02 -0.53 -42.55 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_13446746_15494190.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.171 kcal (2) G-P(sol) polarization free energy of solvation -42.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -193.194 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.548 kcal (6) G-S(sol) free energy of system = (1) + (5) -193.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds