Wall clock time and date at job start Fri Mar 5 2021 23:19:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45201 * 109.47158 * 2 1 4 4 C 1.34232 * 116.99839 * 180.02562 * 3 2 1 5 5 O 1.20823 * 120.00130 * 359.97438 * 4 3 2 6 6 C 1.50702 * 119.99888 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.85029 * 48.79962 * 6 4 3 8 8 C 1.53780 * 113.61447 * 179.97438 * 6 4 3 9 9 C 1.53771 * 87.08235 * 140.06335 * 8 6 4 10 10 F 1.39899 * 113.61683 * 89.19942 * 9 8 6 11 11 C 1.52997 * 113.61523 * 220.01693 * 9 8 6 12 12 S 1.81401 * 109.47198 * 179.97438 * 11 9 8 13 13 O 1.42100 * 110.54422 * 68.37716 * 12 11 9 14 14 O 1.42103 * 110.54451 * 291.62308 * 12 11 9 15 15 O 1.52200 * 104.44926 * 180.02562 * 12 11 9 16 16 C 1.36002 * 114.00444 * 75.00362 * 15 12 11 17 17 C 1.39368 * 120.08518 * 89.99711 * 16 15 12 18 18 S 1.76195 * 120.09698 * 0.02562 * 17 16 15 19 19 C 1.81393 * 103.00180 * 180.02562 * 18 17 16 20 20 C 1.38797 * 119.80826 * 180.02562 * 17 16 15 21 21 C 1.38202 * 119.97758 * 359.97438 * 20 17 16 22 22 C 1.50699 * 119.91906 * 180.02562 * 21 20 17 23 23 O 1.42901 * 109.46830 * 300.00255 * 22 21 20 24 24 Si 1.86298 * 109.46950 * 180.02562 * 22 21 20 25 25 C 1.38274 * 120.16279 * 0.27985 * 21 20 17 26 26 C 1.38306 * 120.18799 * 359.44527 * 25 21 20 27 27 C 1.53778 * 113.68681 * 277.53196 * 6 4 3 28 28 H 1.09001 * 109.46944 * 59.99603 * 1 2 3 29 29 H 1.08998 * 109.47225 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.46775 * 300.00192 * 1 2 3 31 31 H 1.09000 * 109.46752 * 240.00337 * 2 1 3 32 32 H 1.08992 * 109.47145 * 120.00281 * 2 1 3 33 33 H 1.08999 * 113.61382 * 25.50870 * 8 6 4 34 34 H 1.09000 * 113.61171 * 254.61396 * 8 6 4 35 35 H 1.09004 * 109.47144 * 60.00596 * 11 9 8 36 36 H 1.08991 * 109.47271 * 300.00200 * 11 9 8 37 37 H 1.09005 * 109.46853 * 299.99681 * 19 18 17 38 38 H 1.08996 * 109.47844 * 59.99634 * 19 18 17 39 39 H 1.09001 * 109.47570 * 180.02562 * 19 18 17 40 40 H 1.08000 * 120.01316 * 180.02562 * 20 17 16 41 41 H 1.08991 * 109.47351 * 60.00403 * 22 21 20 42 42 H 0.96708 * 114.00246 * 299.99864 * 23 22 21 43 43 H 1.48506 * 109.99834 * 180.02562 * 24 22 21 44 44 H 1.48502 * 110.00011 * 301.31529 * 24 22 21 45 45 H 1.07997 * 119.90292 * 179.72558 * 25 21 20 46 46 H 1.08004 * 119.98189 * 180.29594 * 26 25 21 47 47 H 1.08999 * 113.61365 * 105.46239 * 27 6 4 48 48 H 1.08995 * 113.61922 * 334.55559 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9209 2.9374 0.0000 7 1 3.4716 3.5810 0.7564 8 6 5.4583 2.9680 -0.0001 9 6 5.3566 4.1442 -0.9854 10 9 5.2852 5.3940 -0.3609 11 6 6.3986 4.0980 -2.1047 12 16 6.1772 5.5296 -3.1965 13 8 6.5222 6.7307 -2.5202 14 8 4.9595 5.4206 -3.9210 15 8 7.2588 5.3705 -4.2554 16 6 6.9929 4.4067 -5.1774 17 6 6.2989 4.7270 -6.3428 18 16 5.7642 6.3818 -6.6261 19 6 4.9333 6.2724 -8.2349 20 6 6.0303 3.7387 -7.2796 21 6 6.4513 2.4417 -7.0551 22 6 6.1594 1.3698 -8.0734 23 8 4.7461 1.2500 -8.2470 24 14 6.8517 -0.2550 -7.4805 25 6 7.1352 2.1240 -5.8961 26 6 7.4115 3.1045 -4.9607 27 6 3.9858 3.5796 -1.3957 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5139 0.8900 31 1 1.8933 -0.5138 -0.8900 32 1 1.8934 -0.5138 0.8899 33 1 5.9128 2.0757 -0.4306 34 1 5.8896 3.2413 0.9630 35 1 6.2739 3.1804 -2.6796 36 1 7.3985 4.1223 -1.6714 37 1 5.6423 5.9267 -8.9872 38 1 4.1030 5.5694 -8.1680 39 1 4.5558 7.2554 -8.5165 40 1 5.4931 3.9834 -8.1840 41 1 6.6210 1.6365 -9.0241 42 1 4.2692 1.0140 -7.4395 43 1 6.5709 -1.3203 -8.4763 44 1 8.3161 -0.1349 -7.2653 45 1 7.4584 1.1082 -5.7229 46 1 7.9501 2.8536 -4.0587 47 1 3.2286 4.3466 -1.5591 48 1 4.0375 2.8547 -2.2080 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_13446746_16464788.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:19:57 Heat of formation + Delta-G solvation = -192.947568 kcal Electronic energy + Delta-G solvation = -38004.940796 eV Core-core repulsion = 32776.401672 eV Total energy + Delta-G solvation = -5228.539124 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.089 amu Computer time = 2.34 seconds Orbital eigenvalues (eV) -49.18946 -42.33201 -41.82232 -40.01943 -39.40373 -38.24028 -37.57688 -37.47682 -37.10882 -33.06890 -32.84524 -32.45609 -31.95084 -30.02109 -27.43361 -27.11246 -26.96890 -24.74833 -24.07921 -23.69805 -22.32000 -21.70909 -20.94076 -19.74469 -19.26109 -18.99024 -18.83710 -18.49472 -17.85910 -17.77028 -17.63784 -17.43336 -17.00462 -16.68202 -16.44685 -16.24347 -16.19117 -15.88364 -15.53996 -15.43288 -15.34607 -14.94585 -14.83247 -14.71158 -14.63342 -14.45331 -14.33608 -14.26493 -13.86441 -13.81799 -13.74968 -13.72222 -13.41302 -13.18203 -13.14244 -13.04792 -13.01445 -12.95697 -12.73574 -12.60812 -12.51649 -12.34449 -12.02536 -11.92660 -11.58655 -11.55216 -11.49022 -11.39099 -11.12212 -10.71446 -10.24069 -8.56513 -5.23385 -1.22975 -0.32114 -0.23718 0.23557 0.94002 1.03330 1.03598 1.21947 1.44098 1.51686 1.80059 2.00071 2.40435 2.53568 2.66094 2.73584 2.87297 3.06578 3.14722 3.18848 3.25673 3.32232 3.45670 3.63174 3.71656 3.79665 3.87928 3.89524 3.93687 3.94786 3.97739 4.01266 4.17568 4.19172 4.22311 4.23904 4.27440 4.28660 4.47725 4.51323 4.56515 4.57127 4.64172 4.66687 4.76073 4.76789 4.89864 4.93742 4.98003 5.32187 5.37782 6.33115 6.63898 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.171 7.171 11 C -0.678 4.678 12 S 2.585 3.415 13 O -0.905 6.905 14 O -0.922 6.922 15 O -0.654 6.654 16 C 0.076 3.924 17 C -0.058 4.058 18 S -0.063 6.063 19 C -0.155 4.155 20 C -0.096 4.096 21 C -0.078 4.078 22 C -0.073 4.073 23 O -0.536 6.536 24 Si 0.690 3.310 25 C -0.112 4.112 26 C -0.104 4.104 27 C -0.142 4.142 28 H 0.068 0.932 29 H 0.082 0.918 30 H 0.068 0.932 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.122 0.878 34 H 0.101 0.899 35 H 0.155 0.845 36 H 0.156 0.844 37 H 0.088 0.912 38 H 0.093 0.907 39 H 0.117 0.883 40 H 0.145 0.855 41 H 0.121 0.879 42 H 0.382 0.618 43 H -0.250 1.250 44 H -0.253 1.253 45 H 0.146 0.854 46 H 0.151 0.849 47 H 0.110 0.890 48 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.148 -5.974 -0.774 6.396 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.319 3.681 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.155 0.845 8 C -0.160 4.160 9 C 0.084 3.916 10 F -0.151 7.151 11 C -0.802 4.802 12 S 2.677 3.323 13 O -0.903 6.903 14 O -0.921 6.921 15 O -0.612 6.612 16 C 0.027 3.973 17 C -0.174 4.174 18 S 0.184 5.816 19 C -0.323 4.323 20 C -0.120 4.120 21 C -0.082 4.082 22 C -0.183 4.183 23 O -0.341 6.341 24 Si 0.591 3.409 25 C -0.133 4.133 26 C -0.125 4.125 27 C -0.179 4.179 28 H 0.087 0.913 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.140 0.860 34 H 0.120 0.880 35 H 0.173 0.827 36 H 0.174 0.826 37 H 0.107 0.893 38 H 0.112 0.888 39 H 0.135 0.865 40 H 0.163 0.837 41 H 0.138 0.862 42 H 0.229 0.771 43 H -0.175 1.175 44 H -0.178 1.178 45 H 0.163 0.837 46 H 0.168 0.832 47 H 0.129 0.871 48 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -1.265 -4.883 -1.176 5.180 hybrid contribution 0.296 -1.025 -0.454 1.160 sum -0.969 -5.909 -1.630 6.205 Atomic orbital electron populations 1.21831 0.92233 1.03317 1.03786 1.23122 0.95714 0.79617 1.02823 1.86527 1.24032 1.32952 1.83483 1.23208 0.80878 0.91794 0.72266 1.90684 1.60536 1.42705 1.45092 1.22487 0.97190 0.92102 1.01145 0.84452 1.23590 0.93769 0.97729 1.00868 1.21167 0.95466 0.82183 0.92829 1.93018 1.97016 1.41614 1.83442 1.31400 1.09527 1.25310 1.13953 1.06159 0.74232 0.76599 0.75271 1.93689 1.82228 1.40077 1.74284 1.93718 1.45585 1.86454 1.66317 1.85804 1.67544 1.59467 1.48409 1.17357 1.04551 0.85683 0.89701 1.22087 0.99574 0.99648 0.96141 1.85976 1.66698 1.03901 1.25067 1.23866 1.03851 1.08146 0.96478 1.21016 1.00658 0.91350 0.98998 1.20511 0.96900 0.95202 0.95549 1.25171 0.87300 1.05019 1.00857 1.86533 1.16452 1.92845 1.38306 0.94741 0.81688 0.76585 0.87928 1.20915 0.99791 0.99313 0.93250 1.21221 0.99473 0.90131 1.01679 1.23771 0.96030 1.01757 0.96385 0.91260 0.89947 0.91322 0.90949 0.91013 0.86016 0.88023 0.82667 0.82619 0.89266 0.88828 0.86488 0.83736 0.86195 0.77057 1.17491 1.17767 0.83728 0.83157 0.87139 0.86589 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.38 10.29 37.16 0.38 0.77 16 2 C 0.06 -0.06 6.19 37.16 0.23 0.17 16 3 O -0.35 -0.19 10.22 -39.26 -0.40 -0.59 16 4 C 0.48 0.25 7.49 36.01 0.27 0.52 16 5 O -0.50 -1.35 15.65 -18.75 -0.29 -1.64 16 6 C -0.11 0.16 4.23 -90.96 -0.39 -0.23 16 7 H 0.14 -0.36 8.14 -51.93 -0.42 -0.78 16 8 C -0.12 0.24 6.86 -25.92 -0.18 0.06 16 9 C 0.10 -0.08 1.62 -89.79 -0.15 -0.22 16 10 F -0.17 -0.35 16.28 2.25 0.04 -0.32 16 11 C -0.68 1.33 5.18 37.16 0.19 1.53 16 12 S 2.59 6.61 4.84 -107.50 -0.52 6.09 16 13 O -0.90 -5.92 17.54 -67.03 -1.18 -7.10 16 14 O -0.92 -3.21 15.04 -67.04 -1.01 -4.22 16 15 O -0.65 -1.60 9.44 -52.07 -0.49 -2.09 16 16 C 0.08 0.09 4.80 -39.07 -0.19 -0.10 16 17 C -0.06 -0.10 5.49 -38.95 -0.21 -0.31 16 18 S -0.06 -0.16 20.63 -107.50 -2.22 -2.38 16 19 C -0.16 0.23 9.15 101.05 0.92 1.16 16 20 C -0.10 0.04 8.92 -39.39 -0.35 -0.31 16 21 C -0.08 0.14 5.39 -104.62 -0.56 -0.42 16 22 C -0.07 0.18 2.82 36.01 0.10 0.28 16 23 O -0.54 1.08 12.76 -35.23 -0.45 0.63 16 24 Si 0.69 -2.21 29.78 -169.99 -5.06 -7.27 16 25 C -0.11 0.32 8.66 -39.54 -0.34 -0.02 16 26 C -0.10 0.21 8.46 -39.47 -0.33 -0.12 16 27 C -0.14 0.24 7.08 -25.90 -0.18 0.06 16 28 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.07 -0.10 8.13 -51.93 -0.42 -0.52 16 32 H 0.07 -0.06 8.13 -51.93 -0.42 -0.48 16 33 H 0.12 -0.32 7.40 -51.93 -0.38 -0.71 16 34 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 35 H 0.16 -0.80 6.41 -51.92 -0.33 -1.13 16 36 H 0.16 -0.66 8.14 -51.93 -0.42 -1.08 16 37 H 0.09 -0.24 7.75 -51.92 -0.40 -0.64 16 38 H 0.09 -0.21 7.75 -51.93 -0.40 -0.61 16 39 H 0.12 -0.31 8.14 -51.92 -0.42 -0.73 16 40 H 0.15 -0.22 5.88 -52.49 -0.31 -0.53 16 41 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 42 H 0.38 -2.20 8.70 45.56 0.40 -1.80 16 43 H -0.25 -0.09 7.11 56.52 0.40 0.32 16 44 H -0.25 0.29 7.11 56.52 0.40 0.69 16 45 H 0.15 -0.78 4.86 -52.49 -0.26 -1.04 16 46 H 0.15 -0.81 7.50 -52.48 -0.39 -1.20 16 47 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 48 H 0.12 -0.38 7.92 -51.93 -0.41 -0.79 16 LS Contribution 422.54 15.07 6.37 6.37 Total: 0.00 -12.29 422.54 -12.33 -24.62 By element: Atomic # 1 Polarization: -8.60 SS G_CDS: -6.33 Total: -14.93 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: -0.78 Total: 2.82 kcal Atomic # 8 Polarization: -11.18 SS G_CDS: -3.82 Total: -15.00 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -2.21 SS G_CDS: -5.06 Total: -7.27 kcal Atomic # 16 Polarization: 6.45 SS G_CDS: -2.74 Total: 3.72 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -12.29 -12.33 -24.62 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_13446746_16464788.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.330 kcal (2) G-P(sol) polarization free energy of solvation -12.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.617 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.617 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.948 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.34 seconds