Wall clock time and date at job start Sat Mar 6 2021 01:18:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35998 * 116.99760 * 2 1 4 4 C 1.38526 * 120.07370 * 0.29534 * 3 2 1 5 5 C 1.38285 * 119.99953 * 180.27241 * 4 3 2 6 6 C 1.50695 * 119.92784 * 179.70521 * 5 4 3 7 7 C 1.38213 * 120.14404 * 359.72670 * 5 4 3 8 8 C 1.50698 * 119.92368 * 180.02562 * 7 5 4 9 9 O 1.42905 * 109.46941 * 284.97546 * 8 7 5 10 10 Si 1.86301 * 109.47341 * 164.97835 * 8 7 5 11 11 C 1.38281 * 120.14747 * 359.97438 * 7 5 4 12 12 C 1.38522 * 120.00000 * 0.02562 * 11 7 5 13 13 O 1.35990 * 120.07172 * 179.97438 * 12 11 7 14 14 S 1.52209 * 113.99761 * 90.00596 * 13 12 11 15 15 O 1.42097 * 104.27630 * 318.92705 * 14 13 12 16 16 O 1.42100 * 104.27632 * 191.06833 * 14 13 12 17 17 C 1.81397 * 104.44912 * 74.99825 * 14 13 12 18 18 C 1.52997 * 109.47087 * 179.97438 * 17 14 13 19 19 H 1.08998 * 112.90941 * 43.75015 * 18 17 14 20 20 C 1.53781 * 113.61493 * 174.99784 * 18 17 14 21 21 C 1.53782 * 87.07841 * 89.11993 * 20 18 17 22 22 O 1.42910 * 113.61342 * 270.88247 * 21 20 18 23 23 C 1.42901 * 113.99934 * 294.69800 * 22 21 20 24 24 C 1.53001 * 113.61731 * 140.06861 * 21 20 18 25 25 F 1.39908 * 109.47053 * 54.76863 * 24 21 20 26 26 F 1.39896 * 109.47786 * 174.77047 * 24 21 20 27 27 F 1.39901 * 109.46876 * 294.77206 * 24 21 20 28 28 C 1.53774 * 113.61626 * 272.49819 * 18 17 14 29 29 H 1.09000 * 109.46856 * 60.00452 * 1 2 3 30 30 H 1.09000 * 109.46687 * 180.02562 * 1 2 3 31 31 H 1.08999 * 109.47680 * 300.00080 * 1 2 3 32 32 H 1.08000 * 120.00307 * 0.02562 * 4 3 2 33 33 H 1.09000 * 109.47022 * 270.01968 * 6 5 4 34 34 H 1.09002 * 109.47379 * 30.02062 * 6 5 4 35 35 H 1.09000 * 109.47657 * 150.02372 * 6 5 4 36 36 H 1.08998 * 109.47436 * 44.97457 * 8 7 5 37 37 H 0.96700 * 114.00122 * 300.00103 * 9 8 7 38 38 H 1.48505 * 109.99774 * 58.67626 * 10 8 7 39 39 H 1.48489 * 110.00386 * 179.97438 * 10 8 7 40 40 H 1.07997 * 119.99975 * 180.02562 * 11 7 5 41 41 H 1.09001 * 109.47331 * 59.99889 * 17 14 13 42 42 H 1.09000 * 109.47082 * 299.99967 * 17 14 13 43 43 H 1.09003 * 113.61411 * 334.57293 * 20 18 17 44 44 H 1.09002 * 113.61791 * 203.66537 * 20 18 17 45 45 H 1.08998 * 109.47350 * 56.99249 * 23 22 21 46 46 H 1.09000 * 109.46492 * 176.99255 * 23 22 21 47 47 H 1.08996 * 109.47054 * 296.99158 * 23 22 21 48 48 H 1.09001 * 113.61705 * 156.33755 * 28 18 17 49 49 H 1.09001 * 113.69115 * 25.44221 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 1.2934 2.3745 0.0062 5 6 1.9227 3.6058 0.0005 6 6 1.1019 4.8696 0.0005 7 6 3.3028 3.6799 -0.0057 8 6 3.9834 5.0244 -0.0113 9 8 3.8823 5.6041 -1.3136 10 14 5.7794 4.8132 0.4365 11 6 4.0604 2.5231 -0.0056 12 6 3.4363 1.2865 0.0001 13 8 4.1799 0.1479 -0.0004 14 16 4.5243 -0.3671 1.3899 15 8 4.8443 0.8041 2.1281 16 8 5.4978 -1.3761 1.1586 17 6 2.9798 -1.0998 1.9966 18 6 3.1993 -1.6603 3.4032 19 1 3.7687 -0.9871 4.0441 20 6 1.9164 -2.1973 4.0595 21 6 2.2456 -3.5521 3.4106 22 8 1.6987 -3.7068 2.0994 23 6 0.2703 -3.7342 2.0649 24 6 1.9620 -4.7511 4.3177 25 9 0.6332 -4.7030 4.7527 26 9 2.1769 -5.9359 3.6056 27 9 2.8167 -4.7108 5.4246 28 6 3.7178 -3.1079 3.4156 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5138 0.8899 32 1 0.2148 2.3194 0.0114 33 1 0.8996 5.1715 -1.0272 34 1 0.1598 4.6911 0.5189 35 1 1.6525 5.6606 0.5097 36 1 3.5021 5.6784 0.7158 37 1 4.2903 5.0748 -2.0125 38 1 6.4394 3.8982 -0.5291 39 1 6.4621 6.1319 0.4339 40 1 5.1387 2.5838 -0.0100 41 1 2.6727 -1.9049 1.3290 42 1 2.2026 -0.3362 2.0265 43 1 1.0049 -1.7392 3.6755 44 1 1.9569 -2.2135 5.1486 45 1 -0.1216 -2.8233 2.5173 46 1 -0.0668 -3.8004 1.0305 47 1 -0.0899 -4.5999 2.6206 48 1 4.2507 -3.3731 4.3287 49 1 4.2609 -3.3864 2.5124 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_14060150_17541816.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:18:44 Heat of formation + Delta-G solvation = -292.235640 kcal Electronic energy + Delta-G solvation = -43506.972724 eV Core-core repulsion = 37502.520230 eV Total energy + Delta-G solvation = -6004.452495 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.113 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -51.18515 -48.73310 -48.61424 -42.63200 -41.57014 -40.39417 -39.70358 -38.16929 -37.44876 -37.34405 -37.05460 -33.52813 -32.33631 -31.79097 -29.26873 -28.53170 -28.23166 -27.84005 -26.96220 -26.27941 -23.97549 -23.78648 -22.96783 -21.56214 -20.76360 -20.00430 -19.59476 -19.49025 -19.28460 -18.95614 -18.77764 -18.55929 -17.91094 -17.39376 -17.25743 -17.00085 -16.62386 -16.46673 -16.36696 -16.09882 -15.86133 -15.82725 -15.63048 -15.53685 -15.45038 -15.28516 -15.07617 -14.83690 -14.81536 -14.68431 -14.65128 -14.54738 -14.37999 -14.07395 -13.92705 -13.76419 -13.42900 -13.34398 -13.29277 -13.23100 -13.13634 -13.08484 -13.03982 -12.99953 -12.57714 -12.48188 -12.32746 -12.26528 -12.11657 -12.07446 -11.73967 -11.47465 -10.90584 -10.68335 -10.17471 -9.55589 -4.92187 -1.01147 -0.15636 -0.13051 1.03892 1.21163 1.52418 1.55042 1.70625 1.90724 1.95526 2.09522 2.47685 2.56093 2.59316 2.78619 2.91408 3.05718 3.24606 3.26551 3.30351 3.31849 3.36558 3.46285 3.48214 3.72417 3.77653 3.84457 3.88867 3.92574 3.99007 4.06885 4.12032 4.18475 4.23638 4.26599 4.35135 4.36081 4.38035 4.42944 4.47294 4.55166 4.56112 4.59162 4.62351 4.68151 4.75286 4.85490 4.98963 5.20801 5.28269 5.57422 5.84347 6.30478 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.308 6.308 3 C 0.134 3.866 4 C -0.196 4.196 5 C 0.005 3.995 6 C -0.122 4.122 7 C -0.140 4.140 8 C -0.066 4.066 9 O -0.526 6.526 10 Si 0.679 3.321 11 C -0.050 4.050 12 C 0.031 3.969 13 O -0.649 6.649 14 S 2.586 3.414 15 O -0.948 6.948 16 O -0.922 6.922 17 C -0.630 4.630 18 C -0.092 4.092 19 H 0.110 0.890 20 C -0.136 4.136 21 C 0.042 3.958 22 O -0.329 6.329 23 C 0.010 3.990 24 C 0.437 3.563 25 F -0.182 7.182 26 F -0.173 7.173 27 F -0.174 7.174 28 C -0.127 4.127 29 H 0.065 0.935 30 H 0.108 0.892 31 H 0.063 0.937 32 H 0.148 0.852 33 H 0.085 0.915 34 H 0.071 0.929 35 H 0.080 0.920 36 H 0.126 0.874 37 H 0.377 0.623 38 H -0.257 1.257 39 H -0.249 1.249 40 H 0.151 0.849 41 H 0.158 0.842 42 H 0.140 0.860 43 H 0.096 0.904 44 H 0.112 0.888 45 H 0.054 0.946 46 H 0.101 0.899 47 H 0.053 0.947 48 H 0.125 0.875 49 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.097 3.514 1.353 8.034 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.221 6.221 3 C 0.086 3.914 4 C -0.215 4.215 5 C 0.004 3.996 6 C -0.178 4.178 7 C -0.141 4.141 8 C -0.176 4.176 9 O -0.332 6.332 10 Si 0.580 3.420 11 C -0.070 4.070 12 C -0.011 4.011 13 O -0.608 6.608 14 S 2.681 3.319 15 O -0.947 6.947 16 O -0.920 6.920 17 C -0.756 4.756 18 C -0.111 4.111 19 H 0.128 0.872 20 C -0.174 4.174 21 C 0.000 4.000 22 O -0.247 6.247 23 C -0.085 4.085 24 C 0.382 3.618 25 F -0.163 7.163 26 F -0.154 7.154 27 F -0.155 7.155 28 C -0.164 4.164 29 H 0.083 0.917 30 H 0.126 0.874 31 H 0.082 0.918 32 H 0.166 0.834 33 H 0.103 0.897 34 H 0.090 0.910 35 H 0.099 0.901 36 H 0.143 0.857 37 H 0.225 0.775 38 H -0.182 1.182 39 H -0.173 1.173 40 H 0.168 0.832 41 H 0.176 0.824 42 H 0.158 0.842 43 H 0.115 0.885 44 H 0.130 0.870 45 H 0.073 0.927 46 H 0.119 0.881 47 H 0.072 0.928 48 H 0.143 0.857 49 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -5.639 3.911 1.064 6.945 hybrid contribution -1.479 -0.940 -0.754 1.908 sum -7.118 2.972 0.309 7.720 Atomic orbital electron populations 1.23271 0.76956 1.05014 1.02256 1.86210 1.22658 1.25366 1.87832 1.19077 0.90127 0.86053 0.96188 1.21099 1.00684 0.90532 1.09153 1.19804 0.92941 0.95176 0.91670 1.20960 0.99133 0.94047 1.03699 1.19937 0.93540 0.94963 1.05615 1.24872 1.11304 0.92810 0.88633 1.86610 1.80608 1.49923 1.16105 0.94593 0.74389 0.81552 0.91466 1.21155 1.01332 0.89748 0.94788 1.17054 0.85517 0.82759 1.15812 1.85760 1.72307 1.45506 1.57206 1.05852 0.77028 0.75425 0.73572 1.93645 1.82764 1.46028 1.72222 1.93656 1.55575 1.60426 1.82358 1.30775 1.23744 1.14704 1.06370 1.21743 0.98958 0.96889 0.93531 0.87229 1.23570 0.99239 0.92724 1.01874 1.23932 1.00097 0.90665 0.85330 1.88082 1.21534 1.93086 1.21986 1.23132 0.79731 1.01462 1.04223 1.21158 0.74300 0.85801 0.80496 1.93190 1.35859 1.96626 1.90656 1.93226 1.94390 1.49940 1.77869 1.93184 1.70491 1.96536 1.55320 1.23493 0.91800 0.94093 1.07029 0.91659 0.87374 0.91826 0.83445 0.89677 0.90970 0.90136 0.85678 0.77499 1.18156 1.17325 0.83218 0.82450 0.84171 0.88548 0.86957 0.92697 0.88064 0.92799 0.85718 0.87244 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 101.05 0.99 0.89 16 2 O -0.31 0.51 7.54 -34.21 -0.26 0.26 16 3 C 0.13 -0.06 5.83 -39.12 -0.23 -0.28 16 4 C -0.20 0.41 8.69 -39.46 -0.34 0.06 16 5 C 0.01 -0.01 5.88 -104.62 -0.62 -0.62 16 6 C -0.12 0.38 9.53 36.00 0.34 0.72 16 7 C -0.14 0.07 5.26 -104.62 -0.55 -0.48 16 8 C -0.07 0.07 2.04 36.00 0.07 0.15 16 9 O -0.53 0.19 12.80 -35.23 -0.45 -0.27 16 10 Si 0.68 -0.25 30.24 -169.99 -5.14 -5.39 16 11 C -0.05 -0.06 7.65 -39.46 -0.30 -0.36 16 12 C 0.03 0.05 4.80 -39.12 -0.19 -0.13 16 13 O -0.65 -1.88 9.84 -54.20 -0.53 -2.41 16 14 S 2.59 6.02 5.16 -107.50 -0.55 5.47 16 15 O -0.95 -3.03 16.26 -67.04 -1.09 -4.12 16 16 O -0.92 -5.03 18.09 -67.04 -1.21 -6.25 16 17 C -0.63 0.68 4.11 37.16 0.15 0.83 16 18 C -0.09 0.16 3.84 -89.81 -0.35 -0.18 16 19 H 0.11 -0.35 8.13 -51.93 -0.42 -0.77 16 20 C -0.14 0.37 6.51 -25.92 -0.17 0.20 16 21 C 0.04 -0.02 0.85 -89.81 -0.08 -0.10 16 22 O -0.33 0.06 8.35 -35.23 -0.29 -0.24 16 23 C 0.01 -0.03 10.34 101.05 1.04 1.02 16 24 C 0.44 0.41 2.51 37.16 0.09 0.50 16 25 F -0.18 -0.17 15.37 2.25 0.03 -0.13 16 26 F -0.17 -0.48 17.09 2.25 0.04 -0.44 16 27 F -0.17 -0.18 15.83 2.25 0.04 -0.14 16 28 C -0.13 0.09 6.89 -25.92 -0.18 -0.09 16 29 H 0.06 -0.37 7.68 -51.93 -0.40 -0.77 16 30 H 0.11 -0.71 8.14 -51.93 -0.42 -1.13 16 31 H 0.06 -0.42 7.65 -51.93 -0.40 -0.82 16 32 H 0.15 -0.70 6.30 -52.49 -0.33 -1.03 16 33 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 34 H 0.07 -0.32 8.08 -51.93 -0.42 -0.74 16 35 H 0.08 -0.25 6.22 -51.93 -0.32 -0.58 16 36 H 0.13 -0.32 6.48 -51.93 -0.34 -0.66 16 37 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 38 H -0.26 -0.37 6.68 56.52 0.38 0.01 16 39 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 40 H 0.15 0.13 4.85 -52.49 -0.25 -0.12 16 41 H 0.16 -0.17 6.08 -51.92 -0.32 -0.49 16 42 H 0.14 -0.41 6.04 -51.92 -0.31 -0.72 16 43 H 0.10 -0.39 6.64 -51.93 -0.34 -0.73 16 44 H 0.11 -0.41 8.06 -51.93 -0.42 -0.83 16 45 H 0.05 -0.23 6.60 -51.93 -0.34 -0.57 16 46 H 0.10 -0.40 8.14 -51.93 -0.42 -0.83 16 47 H 0.05 -0.09 6.59 -51.93 -0.34 -0.43 16 48 H 0.12 -0.27 7.01 -51.93 -0.36 -0.63 16 49 H 0.11 0.02 8.10 -51.93 -0.42 -0.41 16 LS Contribution 408.57 15.07 6.16 6.16 Total: 0.00 -9.68 408.57 -9.40 -19.08 By element: Atomic # 1 Polarization: -7.85 SS G_CDS: -5.84 Total: -13.69 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: -0.30 Total: 2.13 kcal Atomic # 8 Polarization: -9.19 SS G_CDS: -3.84 Total: -13.03 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.11 Total: -0.72 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.14 Total: -5.39 kcal Atomic # 16 Polarization: 6.02 SS G_CDS: -0.55 Total: 5.47 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -9.68 -9.40 -19.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_14060150_17541816.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -273.155 kcal (2) G-P(sol) polarization free energy of solvation -9.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -282.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.081 kcal (6) G-S(sol) free energy of system = (1) + (5) -292.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds