Wall clock time and date at job start Fri Mar 5 2021 22:55:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52999 * 109.47220 * 2 1 4 4 C 1.53000 * 109.47330 * 239.99420 * 2 1 3 5 5 O 1.45200 * 109.46984 * 119.99722 * 2 1 3 6 6 C 1.34638 * 117.00448 * 59.99998 * 5 2 1 7 7 O 1.21514 * 119.99326 * 0.02562 * 6 5 2 8 8 N 1.34775 * 120.00419 * 180.02562 * 6 5 2 9 9 C 1.46498 * 120.00041 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.47424 * 179.97438 * 9 8 6 11 11 H 1.08996 * 112.84722 * 316.19994 * 10 9 8 12 12 C 1.53784 * 113.61191 * 87.49735 * 10 9 8 13 13 C 1.53784 * 87.07921 * 139.98647 * 12 10 9 14 14 F 1.39900 * 113.69295 * 220.01377 * 13 12 10 15 15 C 1.52995 * 113.61826 * 89.11288 * 13 12 10 16 16 N 1.46503 * 109.47026 * 87.50275 * 15 13 12 17 17 S 1.65594 * 120.00154 * 164.99973 * 16 15 13 18 18 O 1.42096 * 106.40576 * 311.46388 * 17 16 15 19 19 O 1.42105 * 106.40041 * 178.53921 * 17 16 15 20 20 C 1.76200 * 107.21706 * 65.00712 * 17 16 15 21 21 C 1.33390 * 122.53559 * 269.97571 * 20 17 16 22 22 S 1.75890 * 109.59395 * 180.02562 * 21 20 17 23 23 C 1.75889 * 90.96802 * 359.97438 * 22 21 20 24 24 C 1.50704 * 125.19928 * 179.97438 * 23 22 21 25 25 O 1.42894 * 109.47119 * 245.02475 * 24 23 22 26 26 Si 1.86296 * 109.47156 * 5.03000 * 24 23 22 27 27 C 1.33383 * 109.59330 * 0.02562 * 23 22 21 28 28 C 1.53774 * 113.61876 * 184.99772 * 10 9 8 29 29 H 1.08999 * 109.46895 * 300.00714 * 1 2 3 30 30 H 1.09004 * 109.46932 * 60.00415 * 1 2 3 31 31 H 1.09000 * 109.47262 * 180.02562 * 1 2 3 32 32 H 1.09004 * 109.47112 * 180.02562 * 3 2 1 33 33 H 1.09004 * 109.46829 * 299.99648 * 3 2 1 34 34 H 1.08998 * 109.47278 * 59.99638 * 3 2 1 35 35 H 1.09000 * 109.47342 * 300.00434 * 4 2 1 36 36 H 1.09004 * 109.46979 * 60.00193 * 4 2 1 37 37 H 1.08998 * 109.47059 * 179.97438 * 4 2 1 38 38 H 0.96998 * 119.99987 * 359.97438 * 8 6 5 39 39 H 1.09001 * 109.46935 * 59.99377 * 9 8 6 40 40 H 1.09006 * 109.46833 * 299.99891 * 9 8 6 41 41 H 1.08996 * 113.61278 * 25.44006 * 12 10 9 42 42 H 1.08998 * 113.61751 * 254.52907 * 12 10 9 43 43 H 1.09003 * 109.47047 * 327.51193 * 15 13 12 44 44 H 1.08997 * 109.47752 * 207.50701 * 15 13 12 45 45 H 0.97008 * 119.99887 * 345.00292 * 16 15 13 46 46 H 1.07998 * 125.20728 * 0.04348 * 21 20 17 47 47 H 1.09004 * 109.46431 * 125.02643 * 24 23 22 48 48 H 0.96705 * 114.00173 * 180.02562 * 25 24 23 49 49 H 1.48501 * 109.99896 * 178.68129 * 26 24 23 50 50 H 1.48501 * 109.99811 * 299.99579 * 26 24 23 51 51 H 1.08006 * 122.53711 * 179.97438 * 27 23 22 52 52 H 1.08995 * 113.61310 * 105.46607 * 28 10 9 53 53 H 1.09004 * 113.61416 * 334.57213 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7214 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9723 1.3385 7 8 0.9516 -2.5097 0.5037 8 7 2.0672 -2.6653 2.4174 9 6 1.6740 -4.0667 2.5834 10 6 2.2739 -4.6147 3.8798 11 1 3.3146 -4.3229 4.0210 12 6 1.3918 -4.3747 5.1164 13 6 1.7822 -5.7906 5.5723 14 9 0.7254 -6.5096 6.1408 15 6 3.0540 -5.8321 6.4218 16 7 2.7073 -5.6269 7.8303 17 16 3.8076 -5.9857 9.0147 18 8 4.3032 -7.2848 8.7217 19 8 3.1913 -5.6493 10.2501 20 6 5.1648 -4.8794 8.8182 21 6 6.2179 -5.1649 8.0509 22 16 7.3633 -3.8310 8.1011 23 6 6.3162 -2.9338 9.1931 24 6 6.6138 -1.5675 9.7551 25 8 6.7711 -1.6594 11.1724 26 14 8.1845 -0.9128 8.9969 27 6 5.2191 -3.6482 9.4485 28 6 2.0216 -6.1171 4.0887 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3634 -1.0276 0.0005 32 1 3.1301 1.4425 -0.0005 33 1 1.6767 1.9563 -0.8901 34 1 1.6767 1.9564 0.8899 35 1 1.6767 -1.7490 -1.2491 36 1 1.6768 -0.2076 -2.1392 37 1 3.1300 -0.7209 -1.2493 38 1 2.6268 -2.2364 3.0835 39 1 2.0412 -4.6496 1.7387 40 1 0.5871 -4.1363 2.6278 41 1 0.3325 -4.2678 4.8830 42 1 1.7635 -3.5871 5.7718 43 1 3.7340 -5.0447 6.0966 44 1 3.5380 -6.8017 6.3043 45 1 1.8331 -5.2808 8.0692 46 1 6.3473 -6.0756 7.4851 47 1 5.7898 -0.8923 9.5239 48 1 6.9646 -0.8150 11.6022 49 1 8.4720 0.4473 9.5191 50 1 9.3155 -1.8246 9.3049 51 1 4.4327 -3.2928 10.0980 52 1 2.9017 -6.7360 3.9143 53 1 1.1345 -6.4865 3.5742 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_16498496_15065232.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 22:55:48 Heat of formation + Delta-G solvation = -175.062781 kcal Electronic energy + Delta-G solvation = -39055.827471 eV Core-core repulsion = 33677.507543 eV Total energy + Delta-G solvation = -5378.319928 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.127 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -48.58932 -41.77551 -40.18307 -39.40868 -38.45767 -38.25594 -37.69233 -37.05995 -36.22075 -35.43169 -34.62488 -31.98088 -29.67651 -28.34800 -28.27476 -27.22089 -27.04880 -26.72879 -24.85992 -23.62116 -22.65391 -21.28780 -21.13677 -20.34304 -20.05583 -19.14567 -19.02917 -18.59329 -18.56503 -17.94221 -17.77118 -17.51777 -17.28663 -16.76892 -16.49505 -16.30543 -16.20954 -16.08592 -15.69785 -15.55567 -15.45659 -15.24721 -14.97705 -14.66295 -14.41449 -14.30737 -14.27992 -14.14897 -14.00332 -13.92603 -13.60917 -13.37515 -13.34166 -13.32082 -13.23392 -13.10442 -13.01103 -12.88213 -12.86412 -12.83727 -12.68356 -12.50120 -12.45198 -12.33408 -12.11536 -11.99718 -11.64335 -11.41852 -11.36049 -11.21545 -11.07702 -10.67648 -10.57429 -10.18346 -10.16754 -9.79665 -5.10513 -0.82902 -0.47314 0.35225 0.60601 0.95717 1.19815 1.20822 1.51716 1.80325 1.85744 2.00991 2.64560 3.08885 3.13756 3.24903 3.28458 3.32818 3.38327 3.53126 3.66458 3.71108 3.77099 3.82090 3.94146 3.97011 4.13534 4.19020 4.32833 4.34508 4.39996 4.47033 4.57168 4.61918 4.63118 4.65806 4.72566 4.72914 4.77735 4.78848 4.85090 4.88015 4.90056 4.90321 4.92513 5.03475 5.05809 5.07063 5.14675 5.26740 5.29154 5.36958 5.45292 5.63925 5.91142 6.45057 6.50071 7.39217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.129 3.871 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.368 6.368 6 C 0.640 3.360 7 O -0.598 6.598 8 N -0.696 5.696 9 C 0.149 3.851 10 C -0.106 4.106 11 H 0.139 0.861 12 C -0.149 4.149 13 C 0.077 3.923 14 F -0.214 7.214 15 C 0.104 3.896 16 N -1.105 6.105 17 S 2.730 3.270 18 O -0.980 6.980 19 O -0.989 6.989 20 C -0.690 4.690 21 C -0.085 4.085 22 S 0.193 5.807 23 C -0.197 4.197 24 C -0.048 4.048 25 O -0.557 6.557 26 Si 0.721 3.279 27 C -0.057 4.057 28 C -0.140 4.140 29 H 0.062 0.938 30 H 0.084 0.916 31 H 0.063 0.937 32 H 0.071 0.929 33 H 0.095 0.905 34 H 0.070 0.930 35 H 0.063 0.937 36 H 0.084 0.916 37 H 0.064 0.936 38 H 0.420 0.580 39 H 0.071 0.929 40 H 0.061 0.939 41 H 0.090 0.910 42 H 0.103 0.897 43 H 0.125 0.875 44 H 0.099 0.901 45 H 0.428 0.572 46 H 0.211 0.789 47 H 0.113 0.887 48 H 0.399 0.601 49 H -0.257 1.257 50 H -0.278 1.278 51 H 0.150 0.850 52 H 0.108 0.892 53 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.981 6.999 -5.903 9.984 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.093 3.907 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.282 6.282 6 C 0.394 3.606 7 O -0.489 6.489 8 N -0.357 5.357 9 C 0.027 3.973 10 C -0.125 4.125 11 H 0.156 0.844 12 C -0.187 4.187 13 C 0.057 3.943 14 F -0.195 7.195 15 C -0.022 4.022 16 N -0.868 5.868 17 S 2.819 3.181 18 O -0.970 6.970 19 O -0.979 6.979 20 C -0.792 4.792 21 C -0.224 4.224 22 S 0.457 5.543 23 C -0.314 4.314 24 C -0.158 4.158 25 O -0.368 6.368 26 Si 0.623 3.377 27 C -0.086 4.086 28 C -0.178 4.178 29 H 0.081 0.919 30 H 0.103 0.897 31 H 0.082 0.918 32 H 0.090 0.910 33 H 0.114 0.886 34 H 0.089 0.911 35 H 0.082 0.918 36 H 0.103 0.897 37 H 0.083 0.917 38 H 0.257 0.743 39 H 0.089 0.911 40 H 0.080 0.920 41 H 0.109 0.891 42 H 0.121 0.879 43 H 0.143 0.857 44 H 0.118 0.882 45 H 0.265 0.735 46 H 0.228 0.772 47 H 0.131 0.869 48 H 0.251 0.749 49 H -0.182 1.182 50 H -0.205 1.205 51 H 0.168 0.832 52 H 0.126 0.874 53 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 5.815 6.046 -6.396 10.549 hybrid contribution -1.721 0.631 2.159 2.832 sum 4.094 6.677 -4.237 8.905 Atomic orbital electron populations 1.22481 0.94291 1.03625 1.03427 1.22307 0.94252 0.92591 0.81596 1.21889 1.02568 0.90877 1.04157 1.22475 1.01746 1.02219 0.97318 1.86302 1.71498 1.23344 1.47101 1.18409 0.78806 0.80789 0.82633 1.90920 1.42398 1.71061 1.44537 1.44664 1.55288 1.12727 1.22986 1.21341 0.99586 0.78352 0.98016 1.22662 1.01856 0.95680 0.92289 0.84372 1.23819 1.01716 0.95515 0.97656 1.22696 0.84872 0.93652 0.93070 1.92845 1.59167 1.80258 1.87183 1.21987 0.96127 1.05479 0.78572 1.55127 1.29541 1.83833 1.18273 1.00659 0.72620 0.72982 0.71886 1.93569 1.81383 1.37053 1.84981 1.93567 1.76292 1.85143 1.42932 1.29706 1.20447 1.14773 1.14240 1.26295 0.94733 1.03043 0.98321 1.84361 1.20496 1.07974 1.41505 1.24056 0.98985 1.01603 1.06784 1.24327 1.11846 0.95002 0.84664 1.86579 1.93416 1.38324 1.18480 0.94629 0.74419 0.78873 0.89763 1.19642 0.99223 0.91412 0.98282 1.23645 1.05192 0.96815 0.92182 0.91941 0.89687 0.91844 0.90968 0.88588 0.91143 0.91798 0.89728 0.91729 0.74306 0.91058 0.92031 0.89145 0.87855 0.85738 0.88231 0.73518 0.77194 0.86949 0.74918 1.18182 1.20499 0.83226 0.87353 0.88441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.32 8.37 71.98 0.60 0.28 16 2 C 0.13 0.11 1.13 -10.79 -0.01 0.10 16 3 C -0.14 0.57 8.85 71.98 0.64 1.20 16 4 C -0.18 -0.24 8.37 71.98 0.60 0.36 16 5 O -0.37 -0.88 9.94 -55.47 -0.55 -1.44 16 6 C 0.64 2.15 8.06 129.79 1.05 3.20 16 7 O -0.60 -5.79 11.88 19.80 0.24 -5.56 16 8 N -0.70 3.28 5.56 -590.84 -3.29 -0.01 16 9 C 0.15 -0.98 5.51 86.38 0.48 -0.50 16 10 C -0.11 1.34 3.40 -10.27 -0.03 1.30 16 11 H 0.14 -2.48 7.72 -2.39 -0.02 -2.50 16 12 C -0.15 1.52 7.06 31.12 0.22 1.74 16 13 C 0.08 -0.56 1.87 -10.27 -0.02 -0.58 16 14 F -0.21 -0.23 16.83 44.97 0.76 0.52 16 15 C 0.10 -0.96 5.81 86.38 0.50 -0.46 16 16 N -1.10 5.09 5.81 -187.49 -1.09 4.00 16 17 S 2.73 5.64 5.80 -56.49 -0.33 5.31 16 18 O -0.98 -7.09 17.11 -128.00 -2.19 -9.28 16 19 O -0.99 -10.01 17.63 -128.00 -2.26 -12.27 16 20 C -0.69 0.64 5.86 21.22 0.12 0.77 16 21 C -0.08 0.40 10.70 66.72 0.71 1.11 16 22 S 0.19 -0.83 20.60 -56.49 -1.16 -2.00 16 23 C -0.20 0.18 5.73 24.59 0.14 0.32 16 24 C -0.05 0.16 2.95 71.24 0.21 0.37 16 25 O -0.56 -0.32 12.86 -148.98 -1.92 -2.24 16 26 Si 0.72 -3.47 30.98 68.60 2.13 -1.35 16 27 C -0.06 -0.04 9.59 21.21 0.20 0.16 16 28 C -0.14 1.42 7.12 31.12 0.22 1.64 16 29 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 30 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 31 H 0.06 0.46 5.88 -2.39 -0.01 0.44 16 32 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 33 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 34 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 35 H 0.06 0.43 5.88 -2.39 -0.01 0.41 16 36 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 37 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 38 H 0.42 -4.32 8.58 -92.71 -0.80 -5.12 16 39 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 40 H 0.06 -0.20 7.85 -2.38 -0.02 -0.22 16 41 H 0.09 -0.65 7.90 -2.39 -0.02 -0.67 16 42 H 0.10 -1.35 8.10 -2.39 -0.02 -1.37 16 43 H 0.12 -2.08 7.39 -2.39 -0.02 -2.09 16 44 H 0.10 -0.92 7.75 -2.39 -0.02 -0.94 16 45 H 0.43 -2.37 8.46 -96.74 -0.82 -3.19 16 46 H 0.21 -2.14 8.00 -2.91 -0.02 -2.16 16 47 H 0.11 -0.95 7.96 -2.38 -0.02 -0.96 16 48 H 0.40 -3.15 8.74 -74.05 -0.65 -3.80 16 49 H -0.26 0.40 7.11 99.48 0.71 1.11 16 50 H -0.28 -0.65 7.11 99.48 0.71 0.06 16 51 H 0.15 0.20 7.97 -2.91 -0.02 0.18 16 52 H 0.11 -1.43 8.10 -2.39 -0.02 -1.45 16 53 H 0.10 -0.77 8.10 -2.38 -0.02 -0.79 16 Total: 0.00 -33.02 459.12 -5.27 -38.30 By element: Atomic # 1 Polarization: -23.77 SS G_CDS: -1.25 Total: -25.02 kcal Atomic # 6 Polarization: 5.38 SS G_CDS: 5.63 Total: 11.02 kcal Atomic # 7 Polarization: 8.36 SS G_CDS: -4.37 Total: 3.99 kcal Atomic # 8 Polarization: -24.10 SS G_CDS: -6.68 Total: -30.78 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.76 Total: 0.52 kcal Atomic # 14 Polarization: -3.47 SS G_CDS: 2.13 Total: -1.35 kcal Atomic # 16 Polarization: 4.81 SS G_CDS: -1.49 Total: 3.31 kcal Total: -33.02 -5.27 -38.30 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_16498496_15065232.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.767 kcal (2) G-P(sol) polarization free energy of solvation -33.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -169.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.274 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.296 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds