Wall clock time and date at job start Fri Mar 5 2021 22:57:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47290 * 2 1 4 4 C 1.53003 * 109.46932 * 240.00202 * 2 1 3 5 5 O 1.45200 * 109.47212 * 120.00519 * 2 1 3 6 6 C 1.34637 * 117.00110 * 59.99757 * 5 2 1 7 7 O 1.21509 * 119.99916 * 359.97438 * 6 5 2 8 8 N 1.34769 * 120.00049 * 180.02562 * 6 5 2 9 9 C 1.46497 * 120.00274 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.90477 * 336.24972 * 9 8 6 11 11 C 1.53779 * 113.61581 * 107.50145 * 9 8 6 12 12 C 1.53779 * 87.08402 * 139.98450 * 11 9 8 13 13 F 1.39899 * 113.69427 * 89.12595 * 12 11 9 14 14 C 1.53000 * 113.61731 * 220.02348 * 12 11 9 15 15 N 1.46505 * 109.47018 * 277.49574 * 14 12 11 16 16 S 1.65595 * 120.00181 * 164.99779 * 15 14 12 17 17 O 1.42100 * 106.39934 * 178.54026 * 16 15 14 18 18 O 1.42101 * 106.40180 * 311.45620 * 16 15 14 19 19 C 1.76196 * 107.21787 * 64.99924 * 16 15 14 20 20 C 1.33392 * 122.53864 * 90.02627 * 19 16 15 21 21 S 1.75888 * 109.59324 * 180.02562 * 20 19 16 22 22 C 1.75881 * 90.96880 * 359.97438 * 21 20 19 23 23 C 1.50704 * 125.20397 * 180.02562 * 22 21 20 24 24 O 1.42899 * 109.47007 * 245.02682 * 23 22 21 25 25 Si 1.86303 * 109.46785 * 5.02402 * 23 22 21 26 26 C 1.33385 * 109.59403 * 359.73179 * 22 21 20 27 27 C 1.53784 * 113.61569 * 204.99925 * 9 8 6 28 28 H 1.08999 * 109.46905 * 299.99688 * 1 2 3 29 29 H 1.09008 * 109.47310 * 59.99529 * 1 2 3 30 30 H 1.08999 * 109.47620 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46761 * 180.02562 * 3 2 1 32 32 H 1.08996 * 109.46995 * 300.00257 * 3 2 1 33 33 H 1.08999 * 109.46892 * 60.00304 * 3 2 1 34 34 H 1.08992 * 109.47299 * 300.00124 * 4 2 1 35 35 H 1.09005 * 109.46961 * 60.00559 * 4 2 1 36 36 H 1.08997 * 109.47043 * 180.02562 * 4 2 1 37 37 H 0.97009 * 120.00192 * 359.97438 * 8 6 5 38 38 H 1.09006 * 113.61307 * 25.43652 * 11 9 8 39 39 H 1.09007 * 113.61642 * 254.53409 * 11 9 8 40 40 H 1.09005 * 109.47442 * 37.48787 * 14 12 11 41 41 H 1.08994 * 109.47401 * 157.49461 * 14 12 11 42 42 H 0.97005 * 119.99273 * 344.99879 * 15 14 12 43 43 H 1.08000 * 125.20690 * 359.97438 * 20 19 16 44 44 H 1.08996 * 109.47245 * 125.01955 * 23 22 21 45 45 H 0.96699 * 114.00097 * 59.99926 * 24 23 22 46 46 H 1.48501 * 110.00053 * 58.68251 * 25 23 22 47 47 H 1.48499 * 109.99756 * 179.97438 * 25 23 22 48 48 H 1.08011 * 122.53734 * 180.24116 * 26 22 21 49 49 H 1.09004 * 113.61451 * 105.47149 * 27 9 8 50 50 H 1.08994 * 113.61477 * 334.56451 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9508 -2.5094 0.5039 8 7 2.0672 -2.6656 2.4169 9 6 1.6731 -4.0667 2.5834 10 1 0.7593 -4.3172 2.0446 11 6 2.8210 -5.0619 2.3456 12 6 2.2721 -5.8596 3.5402 13 9 1.3094 -6.8110 3.1863 14 6 3.3624 -6.4280 4.4508 15 7 3.8668 -7.6816 3.8848 16 16 5.2873 -8.3278 4.4387 17 8 5.4808 -9.5417 3.7258 18 8 6.2352 -7.2691 4.4424 19 6 5.0346 -8.7753 6.1240 20 6 4.5927 -9.9802 6.4879 21 16 4.4649 -10.0570 8.2404 22 6 5.0362 -8.3998 8.3846 23 6 5.2227 -7.6549 9.6813 24 8 4.3069 -6.5593 9.7371 25 14 4.9016 -8.8060 11.1105 26 6 5.2853 -7.9054 7.1711 27 6 1.6736 -4.5370 4.0476 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 3.1300 1.4424 -0.0005 32 1 1.6767 1.9564 -0.8899 33 1 1.6767 1.9563 0.8900 34 1 1.6766 -1.7488 -1.2494 35 1 1.6766 -0.2073 -2.1393 36 1 3.1299 -0.7216 -1.2491 37 1 2.6269 -2.2367 3.0832 38 1 3.8098 -4.6380 2.5210 39 1 2.7492 -5.5926 1.3962 40 1 4.1794 -5.7108 4.5307 41 1 2.9470 -6.6174 5.4405 42 1 3.3687 -8.1330 3.1855 43 1 4.3498 -10.7851 5.8101 44 1 6.2438 -7.2784 9.7404 45 1 3.3772 -6.8209 9.6895 46 1 5.8264 -9.9661 11.0459 47 1 5.0828 -8.0836 12.3951 48 1 5.6509 -6.9008 7.0169 49 1 0.6754 -4.6439 4.4722 50 1 2.3486 -3.9696 4.6882 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_16499084_15065232.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 22:57:00 Heat of formation + Delta-G solvation = -165.741173 kcal Electronic energy + Delta-G solvation = -36998.842417 eV Core-core repulsion = 31776.464323 eV Total energy + Delta-G solvation = -5222.378094 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.111 amu Computer time = 2.85 seconds Orbital eigenvalues (eV) -48.95516 -41.78572 -40.07852 -39.58464 -38.32180 -37.87328 -37.65647 -36.92396 -36.27627 -35.20098 -33.87331 -31.92721 -28.71053 -28.32537 -28.28580 -27.31061 -27.26377 -25.04401 -24.72211 -22.61476 -21.55992 -21.45469 -20.86565 -20.20597 -19.32422 -19.13120 -18.80803 -18.20231 -17.92211 -17.66285 -17.38213 -17.15862 -17.08995 -16.73527 -16.44333 -16.24111 -15.93696 -15.56059 -15.43882 -15.34802 -15.29306 -15.12083 -14.91336 -14.45952 -14.36306 -14.25813 -14.12317 -14.03166 -13.84930 -13.44126 -13.40843 -13.36009 -13.21525 -13.09816 -13.00631 -12.97601 -12.93547 -12.82907 -12.81273 -12.54845 -12.36456 -12.29981 -12.24525 -11.79294 -11.76002 -11.64839 -11.30395 -10.98682 -10.83424 -10.74981 -10.29871 -10.25687 -9.95543 -5.32985 -0.84397 -0.55589 0.22172 0.48615 0.91175 1.04713 1.14488 1.43799 1.75809 1.82564 1.91834 2.62775 2.80509 2.84522 2.96131 3.13469 3.16144 3.28048 3.37891 3.41057 3.52945 3.74854 3.77617 3.83329 3.94896 3.97253 4.03718 4.11453 4.25785 4.27160 4.30429 4.31461 4.46655 4.55661 4.56703 4.57770 4.63436 4.69464 4.73786 4.78553 4.79877 4.86737 4.93395 4.96826 4.97838 5.08931 5.23132 5.36740 5.44686 5.58049 5.70749 6.29746 6.35848 7.38879 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.651 3.349 7 O -0.564 6.564 8 N -0.701 5.701 9 C 0.144 3.856 10 H 0.128 0.872 11 C -0.170 4.170 12 C 0.093 3.907 13 F -0.179 7.179 14 C 0.112 3.888 15 N -1.113 6.113 16 S 2.712 3.288 17 O -0.951 6.951 18 O -0.947 6.947 19 C -0.690 4.690 20 C -0.080 4.080 21 S 0.160 5.840 22 C -0.229 4.229 23 C -0.026 4.026 24 O -0.532 6.532 25 Si 0.656 3.344 26 C -0.045 4.045 27 C -0.158 4.158 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.408 0.592 38 H 0.110 0.890 39 H 0.092 0.908 40 H 0.103 0.897 41 H 0.083 0.917 42 H 0.424 0.576 43 H 0.187 0.813 44 H 0.127 0.873 45 H 0.380 0.620 46 H -0.238 1.238 47 H -0.231 1.231 48 H 0.157 0.843 49 H 0.098 0.902 50 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.541 1.389 4.049 5.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.279 6.279 6 C 0.405 3.595 7 O -0.453 6.453 8 N -0.360 5.360 9 C 0.040 3.960 10 H 0.145 0.855 11 C -0.210 4.210 12 C 0.072 3.928 13 F -0.159 7.159 14 C -0.015 4.015 15 N -0.875 5.875 16 S 2.799 3.201 17 O -0.942 6.942 18 O -0.937 6.937 19 C -0.790 4.790 20 C -0.219 4.219 21 S 0.424 5.576 22 C -0.347 4.347 23 C -0.140 4.140 24 O -0.337 6.337 25 Si 0.555 3.445 26 C -0.074 4.074 27 C -0.197 4.197 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.244 0.756 38 H 0.129 0.871 39 H 0.111 0.889 40 H 0.121 0.879 41 H 0.101 0.899 42 H 0.260 0.740 43 H 0.204 0.796 44 H 0.144 0.856 45 H 0.228 0.772 46 H -0.162 1.162 47 H -0.154 1.154 48 H 0.175 0.825 49 H 0.117 0.883 50 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -2.623 0.019 5.083 5.720 hybrid contribution 0.330 1.007 -0.840 1.352 sum -2.293 1.026 4.244 4.932 Atomic orbital electron populations 1.22525 0.93815 1.05049 1.02747 1.22133 0.94455 0.91569 0.81826 1.21881 1.02360 0.92318 1.03352 1.22524 1.01643 1.03442 0.96541 1.86309 1.71443 1.23346 1.46781 1.18142 0.78565 0.80614 0.82184 1.90928 1.40807 1.70515 1.43001 1.44635 1.55510 1.11877 1.23938 1.22473 0.99125 0.77987 0.96411 0.85463 1.24267 1.00572 0.96975 0.99140 1.21640 0.87478 0.86510 0.97135 1.92900 1.64500 1.65650 1.92868 1.21756 0.96992 0.86018 0.96707 1.55433 1.45371 1.34168 1.52482 1.01550 0.72424 0.73394 0.72780 1.93628 1.84062 1.45836 1.70624 1.93608 1.57698 1.56075 1.86357 1.30024 1.20141 1.02651 1.26163 1.25936 0.96841 0.99231 0.99872 1.84386 1.60975 1.10568 1.01631 1.25069 1.11184 0.98324 1.00109 1.24443 0.96878 0.94252 0.98394 1.86545 1.19453 1.31460 1.96290 0.95149 0.90544 0.79665 0.79154 1.19618 0.97951 1.00453 0.89409 1.24033 1.04157 0.94294 0.97241 0.92098 0.90907 0.89433 0.91369 0.89918 0.91379 0.89429 0.90906 0.92085 0.75595 0.87127 0.88887 0.87877 0.89896 0.73952 0.79615 0.85580 0.77196 1.16232 1.15388 0.82538 0.88350 0.86920 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 2 C 0.14 0.14 1.13 -90.62 -0.10 0.04 16 3 C -0.14 0.13 8.85 37.16 0.33 0.46 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.10 16 5 O -0.36 -0.69 9.94 -40.32 -0.40 -1.09 16 6 C 0.65 1.38 8.06 54.05 0.44 1.82 16 7 O -0.56 -2.59 11.48 -19.28 -0.22 -2.81 16 8 N -0.70 0.87 5.36 -57.94 -0.31 0.56 16 9 C 0.14 -0.28 4.22 -67.12 -0.28 -0.56 16 10 H 0.13 0.00 7.47 -51.93 -0.39 -0.39 16 11 C -0.17 0.41 7.33 -25.92 -0.19 0.22 16 12 C 0.09 -0.28 1.73 -89.81 -0.16 -0.44 16 13 F -0.18 0.13 16.64 2.25 0.04 0.17 16 14 C 0.11 -0.41 5.91 -4.04 -0.02 -0.43 16 15 N -1.11 2.57 5.96 -10.61 -0.06 2.51 16 16 S 2.71 0.79 5.80 -107.50 -0.62 0.17 16 17 O -0.95 -3.13 17.64 -57.17 -1.01 -4.14 16 18 O -0.95 -2.83 17.10 -57.17 -0.98 -3.81 16 19 C -0.69 0.37 5.86 -41.21 -0.24 0.13 16 20 C -0.08 0.11 10.70 29.04 0.31 0.42 16 21 S 0.16 -0.31 20.60 -107.50 -2.21 -2.53 16 22 C -0.23 0.28 5.70 -36.00 -0.21 0.07 16 23 C -0.03 0.05 2.96 36.01 0.11 0.15 16 24 O -0.53 0.99 12.88 -35.23 -0.45 0.53 16 25 Si 0.66 -1.39 30.98 -169.99 -5.27 -6.65 16 26 C -0.05 0.03 9.59 -41.21 -0.40 -0.37 16 27 C -0.16 0.68 7.29 -25.91 -0.19 0.49 16 28 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 29 H 0.07 -0.02 8.14 -51.92 -0.42 -0.44 16 30 H 0.09 0.27 5.88 -51.93 -0.31 -0.03 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.41 -1.45 8.84 -40.82 -0.36 -1.81 16 38 H 0.11 -0.36 7.96 -51.93 -0.41 -0.78 16 39 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.10 -0.47 7.55 -51.93 -0.39 -0.86 16 41 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 42 H 0.42 -1.24 8.19 -34.47 -0.28 -1.52 16 43 H 0.19 -0.57 8.00 -52.49 -0.42 -0.99 16 44 H 0.13 -0.18 7.96 -51.93 -0.41 -0.60 16 45 H 0.38 -2.20 8.70 45.56 0.40 -1.80 16 46 H -0.24 -0.06 7.11 56.52 0.40 0.35 16 47 H -0.23 -0.14 7.11 56.52 0.40 0.26 16 48 H 0.16 -0.18 7.96 -52.48 -0.42 -0.60 16 49 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 50 H 0.11 -0.72 8.08 -51.93 -0.42 -1.14 16 LS Contribution 438.55 15.07 6.61 6.61 Total: 0.00 -11.63 438.55 -12.02 -23.66 By element: Atomic # 1 Polarization: -8.23 SS G_CDS: -7.15 Total: -15.38 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: 0.02 Total: 2.21 kcal Atomic # 7 Polarization: 3.44 SS G_CDS: -0.37 Total: 3.06 kcal Atomic # 8 Polarization: -8.27 SS G_CDS: -3.06 Total: -11.33 kcal Atomic # 9 Polarization: 0.13 SS G_CDS: 0.04 Total: 0.17 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: -5.27 Total: -6.65 kcal Atomic # 16 Polarization: 0.48 SS G_CDS: -2.84 Total: -2.35 kcal Total LS contribution 6.61 Total: 6.61 kcal Total: -11.63 -12.02 -23.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_16499084_15065232.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.086 kcal (2) G-P(sol) polarization free energy of solvation -11.634 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.021 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.655 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.741 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.86 seconds