Wall clock time and date at job start Fri Mar 5 2021 23:13:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86293 * 109.47369 * 2 1 4 4 C 1.50704 * 109.47074 * 239.99335 * 2 1 3 5 5 C 1.33378 * 125.20528 * 313.43367 * 4 2 1 6 6 S 1.76200 * 122.54297 * 0.02562 * 5 4 2 7 7 O 1.42103 * 106.40239 * 180.42657 * 6 5 4 8 8 O 1.42101 * 106.39678 * 313.34411 * 6 5 4 9 9 N 1.65594 * 107.21926 * 66.88419 * 6 5 4 10 10 C 1.46497 * 119.99924 * 65.36606 * 9 6 5 11 11 H 1.09003 * 112.85242 * 345.51596 * 10 9 6 12 12 C 1.53777 * 113.61759 * 116.82641 * 10 9 6 13 13 C 1.53774 * 87.08399 * 89.11286 * 12 10 9 14 14 O 1.42901 * 113.61914 * 270.88549 * 13 12 10 15 15 C 1.52998 * 113.69054 * 139.99261 * 13 12 10 16 16 F 1.39898 * 109.47353 * 322.46523 * 15 13 12 17 17 F 1.39900 * 109.47523 * 82.46616 * 15 13 12 18 18 F 1.39907 * 109.47384 * 202.46677 * 15 13 12 19 19 C 1.53781 * 87.08137 * 25.43601 * 13 12 10 20 20 C 1.38439 * 114.91875 * 179.79028 * 5 4 2 21 21 C 1.33381 * 114.91954 * 0.43012 * 20 5 4 22 22 S 1.75884 * 125.19888 * 133.45519 * 4 2 1 23 23 H 0.96698 * 113.99389 * 60.77937 * 1 2 3 24 24 H 1.09002 * 109.46734 * 120.00376 * 2 1 3 25 25 H 1.48498 * 109.99918 * 298.67830 * 3 2 1 26 26 H 1.48498 * 109.99885 * 59.99537 * 3 2 1 27 27 H 0.96996 * 119.99811 * 245.36325 * 9 6 5 28 28 H 1.09001 * 113.61840 * 203.66405 * 12 10 9 29 29 H 1.09003 * 113.61135 * 334.56220 * 12 10 9 30 30 H 0.96700 * 114.00168 * 277.49842 * 14 13 12 31 31 H 1.08996 * 113.61369 * 220.01936 * 19 13 12 32 32 H 1.09000 * 113.61360 * 89.11193 * 19 13 12 33 33 H 1.07994 * 122.53827 * 180.27362 * 20 5 4 34 34 H 1.07993 * 125.20690 * 179.85972 * 21 20 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7106 -1.2304 5 6 1.4813 -1.8833 -1.6787 6 16 0.2013 -2.7808 -0.8657 7 8 0.0030 -3.9688 -1.6198 8 8 0.5293 -2.7836 0.5169 9 7 -1.1896 -1.8946 -1.0147 10 6 -1.7831 -1.6797 -2.3367 11 1 -1.1026 -1.9270 -3.1515 12 6 -3.1826 -2.2978 -2.4915 13 6 -3.7430 -0.9663 -1.9646 14 8 -3.8666 -0.9201 -0.5417 15 6 -5.0105 -0.5042 -2.6863 16 9 -4.9116 -0.8138 -4.0470 17 9 -6.1219 -1.1547 -2.1397 18 9 -5.1571 0.8786 -2.5323 19 6 -2.4582 -0.3069 -2.4931 20 6 2.0924 -2.3396 -2.8341 21 6 3.0449 -1.5416 -3.3188 22 16 3.2013 -0.1203 -2.2946 23 1 -0.3932 0.4313 -0.7710 24 1 1.7923 -0.5139 0.8900 25 1 1.5881 2.4584 -1.2243 26 1 1.5615 2.4678 1.2084 27 1 -1.6113 -1.5179 -0.2267 28 1 -3.4554 -2.5076 -3.5258 29 1 -3.3634 -3.1416 -1.8256 30 1 -4.6727 -1.3333 -0.2033 31 1 -2.0541 0.4566 -1.8285 32 1 -2.5329 0.0276 -3.5278 33 1 1.8203 -3.2723 -3.3056 34 1 3.6277 -1.7361 -4.2069 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_17047582_14772022.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:13:17 Heat of formation + Delta-G solvation = -220.388824 kcal Electronic energy + Delta-G solvation = -30117.384178 eV Core-core repulsion = 25243.750771 eV Total energy + Delta-G solvation = -4873.633406 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.019 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -51.26772 -48.81495 -48.72514 -41.29363 -39.77053 -38.29539 -37.59763 -36.74169 -36.70462 -33.65240 -31.91787 -28.66454 -27.65034 -27.33007 -24.56609 -24.15751 -21.87153 -21.41541 -20.48702 -19.87899 -19.60457 -19.45760 -19.37211 -18.63981 -18.12373 -17.26906 -17.13228 -17.05509 -16.58998 -16.24661 -15.82002 -15.64191 -15.55875 -15.42699 -15.20558 -15.17995 -15.00941 -14.92265 -14.86012 -14.34627 -14.31194 -14.15892 -14.10166 -13.95875 -13.21226 -13.09123 -13.05268 -12.93523 -12.84708 -12.71850 -12.62005 -12.30046 -12.07513 -11.65608 -11.35343 -11.17447 -10.62485 -10.22848 -9.86651 -5.27868 -0.70266 -0.52160 0.26933 0.54404 0.95071 1.06089 1.38105 1.42904 1.72184 1.96300 2.24845 2.49453 2.52261 2.68452 2.74431 2.96530 3.18448 3.23391 3.29766 3.40045 3.50758 3.82026 3.91120 4.07434 4.17398 4.19840 4.31175 4.36925 4.41938 4.61244 4.63905 4.83175 4.95422 5.05976 5.93511 5.98985 6.10411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.515 6.515 2 C -0.070 4.070 3 Si 0.671 3.329 4 C -0.099 4.099 5 C -0.669 4.669 6 S 2.716 3.284 7 O -0.957 6.957 8 O -0.944 6.944 9 N -1.083 6.083 10 C 0.142 3.858 11 H 0.116 0.884 12 C -0.169 4.169 13 C 0.064 3.936 14 O -0.509 6.509 15 C 0.433 3.567 16 F -0.174 7.174 17 F -0.182 7.182 18 F -0.175 7.175 19 C -0.130 4.130 20 C -0.078 4.078 21 C -0.210 4.210 22 S 0.159 5.841 23 H 0.376 0.624 24 H 0.153 0.847 25 H -0.240 1.240 26 H -0.228 1.228 27 H 0.432 0.568 28 H 0.118 0.882 29 H 0.102 0.898 30 H 0.394 0.606 31 H 0.099 0.901 32 H 0.121 0.879 33 H 0.159 0.841 34 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.696 3.020 -2.932 4.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.323 6.323 2 C -0.181 4.181 3 Si 0.568 3.432 4 C -0.220 4.220 5 C -0.769 4.769 6 S 2.802 3.198 7 O -0.947 6.947 8 O -0.934 6.934 9 N -0.846 5.846 10 C 0.033 3.967 11 H 0.134 0.866 12 C -0.209 4.209 13 C 0.020 3.980 14 O -0.317 6.317 15 C 0.379 3.621 16 F -0.156 7.156 17 F -0.163 7.163 18 F -0.157 7.157 19 C -0.168 4.168 20 C -0.106 4.106 21 C -0.346 4.346 22 S 0.424 5.576 23 H 0.226 0.774 24 H 0.170 0.830 25 H -0.164 1.164 26 H -0.151 1.151 27 H 0.273 0.727 28 H 0.136 0.864 29 H 0.121 0.879 30 H 0.245 0.755 31 H 0.117 0.883 32 H 0.139 0.861 33 H 0.176 0.824 34 H 0.193 0.807 Dipole moment (debyes) X Y Z Total from point charges 4.236 4.311 -2.228 6.442 hybrid contribution -2.582 -0.903 -0.769 2.842 sum 1.654 3.408 -2.997 4.831 Atomic orbital electron populations 1.86724 1.16461 1.80011 1.49122 1.25016 0.84504 1.11793 0.96795 0.94998 0.91229 0.73695 0.83321 1.25032 0.99799 0.97069 1.00069 1.29966 1.24828 1.09914 1.12174 1.01454 0.72301 0.72739 0.73326 1.93599 1.85100 1.42572 1.73430 1.93606 1.83114 1.86111 1.30567 1.55516 1.41871 1.73205 1.13989 1.21332 0.94903 0.95080 0.85394 0.86598 1.24251 0.95951 0.96288 1.04386 1.23579 0.90478 1.00281 0.83673 1.86563 1.47497 1.82310 1.15302 1.21263 0.86698 0.75834 0.78339 1.93192 1.96163 1.92711 1.33486 1.93195 1.56513 1.81235 1.85376 1.93231 1.96297 1.30821 1.95331 1.23641 0.91610 0.98318 1.03279 1.19779 0.95772 1.01260 0.93785 1.25939 1.04744 0.98570 1.05315 1.84296 1.34075 1.21821 1.17454 0.77363 0.82970 1.16365 1.15088 0.72741 0.86430 0.87942 0.75477 0.88254 0.86086 0.82376 0.80682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 33. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.71 8.61 -39.44 -0.34 0.37 16 2 C -0.07 0.09 2.07 36.01 0.07 0.16 16 3 Si 0.67 -1.54 31.07 -169.99 -5.28 -6.83 16 4 C -0.10 0.08 5.74 -36.00 -0.21 -0.12 16 5 C -0.67 -0.08 5.78 -41.21 -0.24 -0.32 16 6 S 2.72 4.14 4.88 -107.50 -0.52 3.61 16 7 O -0.96 -3.82 17.10 -57.17 -0.98 -4.80 16 8 O -0.94 -4.37 16.65 -60.90 -1.01 -5.38 16 9 N -1.08 1.55 3.66 -4.20 -0.02 1.54 16 10 C 0.14 -0.43 4.43 -67.12 -0.30 -0.73 16 11 H 0.12 -0.51 8.05 -51.93 -0.42 -0.92 16 12 C -0.17 0.49 7.15 -25.92 -0.19 0.30 16 13 C 0.06 -0.16 1.36 -89.81 -0.12 -0.28 16 14 O -0.51 1.23 12.00 -35.23 -0.42 0.81 16 15 C 0.43 -0.34 2.85 37.16 0.11 -0.23 16 16 F -0.17 0.08 15.76 2.25 0.04 0.12 16 17 F -0.18 -0.01 16.65 2.25 0.04 0.03 16 18 F -0.18 -0.14 17.18 2.25 0.04 -0.10 16 19 C -0.13 0.50 7.03 -25.92 -0.18 0.32 16 20 C -0.08 0.04 9.70 -41.20 -0.40 -0.36 16 21 C -0.21 0.36 11.23 29.04 0.33 0.69 16 22 S 0.16 -0.33 20.70 -107.50 -2.23 -2.55 16 23 H 0.38 -1.53 6.73 45.56 0.31 -1.23 16 24 H 0.15 -0.16 7.74 -51.93 -0.40 -0.56 16 25 H -0.24 0.26 7.11 56.52 0.40 0.66 16 26 H -0.23 -0.08 7.11 56.52 0.40 0.32 16 27 H 0.43 -0.64 6.43 -34.46 -0.22 -0.86 16 28 H 0.12 -0.44 7.14 -51.93 -0.37 -0.81 16 29 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 30 H 0.39 -1.88 8.42 45.56 0.38 -1.50 16 31 H 0.10 -0.45 6.53 -51.93 -0.34 -0.79 16 32 H 0.12 -0.63 7.88 -51.93 -0.41 -1.04 16 33 H 0.16 -0.18 7.74 -52.49 -0.41 -0.59 16 34 H 0.18 -0.68 8.06 -52.49 -0.42 -1.11 16 LS Contribution 318.66 15.07 4.80 4.80 Total: 0.00 -9.13 318.66 -8.93 -18.06 By element: Atomic # 1 Polarization: -7.18 SS G_CDS: -1.92 Total: -9.10 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: -1.12 Total: -0.57 kcal Atomic # 7 Polarization: 1.55 SS G_CDS: -0.02 Total: 1.54 kcal Atomic # 8 Polarization: -6.26 SS G_CDS: -2.75 Total: -9.01 kcal Atomic # 9 Polarization: -0.07 SS G_CDS: 0.11 Total: 0.04 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.28 Total: -6.83 kcal Atomic # 16 Polarization: 3.81 SS G_CDS: -2.75 Total: 1.06 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -9.13 -8.93 -18.06 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17047582_14772022.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -202.327 kcal (2) G-P(sol) polarization free energy of solvation -9.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -211.458 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.931 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.062 kcal (6) G-S(sol) free energy of system = (1) + (5) -220.389 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds