Wall clock time and date at job start Fri Mar 5 2021 23:13:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47342 * 2 1 4 4 C 1.50705 * 109.47074 * 119.99971 * 2 1 3 5 5 C 1.38220 * 119.99595 * 76.11048 * 4 2 1 6 6 S 1.76200 * 120.00167 * 0.28441 * 5 4 2 7 7 O 1.42101 * 106.39901 * 176.99537 * 6 5 4 8 8 O 1.42099 * 106.39854 * 309.91085 * 6 5 4 9 9 N 1.65599 * 107.21852 * 63.45400 * 6 5 4 10 10 C 1.46489 * 120.00117 * 63.55106 * 9 6 5 11 11 H 1.09004 * 112.85340 * 346.31919 * 10 9 6 12 12 C 1.53781 * 113.61673 * 117.62530 * 10 9 6 13 13 C 1.53777 * 87.08448 * 89.11647 * 12 10 9 14 14 O 1.42909 * 113.68787 * 270.87798 * 13 12 10 15 15 C 1.52997 * 113.61837 * 139.98697 * 13 12 10 16 16 F 1.39903 * 109.46776 * 322.50114 * 15 13 12 17 17 F 1.39896 * 109.47520 * 82.49849 * 15 13 12 18 18 F 1.39899 * 109.47270 * 202.50283 * 15 13 12 19 19 C 1.53779 * 87.08269 * 25.43274 * 13 12 10 20 20 C 1.38251 * 119.99507 * 180.02562 * 5 4 2 21 21 C 1.38211 * 120.00201 * 359.97438 * 20 5 4 22 22 C 1.38254 * 120.00329 * 359.97438 * 21 20 5 23 23 C 1.38218 * 119.99582 * 359.97231 * 22 21 20 24 24 H 0.96700 * 113.99315 * 64.90473 * 1 2 3 25 25 H 1.09001 * 109.47454 * 239.99527 * 2 1 3 26 26 H 1.48500 * 109.99809 * 60.00065 * 3 2 1 27 27 H 1.48501 * 110.00027 * 181.31268 * 3 2 1 28 28 H 0.96998 * 119.99427 * 243.54989 * 9 6 5 29 29 H 1.08997 * 113.61971 * 203.66639 * 12 10 9 30 30 H 1.09008 * 113.61429 * 334.56433 * 12 10 9 31 31 H 0.96706 * 113.99569 * 277.52750 * 14 13 12 32 32 H 1.08990 * 113.62166 * 220.02292 * 19 13 12 33 33 H 1.08997 * 113.61112 * 89.11255 * 19 13 12 34 34 H 1.08005 * 119.99861 * 179.97438 * 20 5 4 35 35 H 1.08008 * 120.00164 * 179.97438 * 21 20 5 36 36 H 1.08000 * 120.00550 * 179.97438 * 22 21 20 37 37 H 1.07996 * 119.99600 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8907 -2.0905 1.2966 6 16 1.2587 -3.0193 -0.0607 7 8 1.4161 -4.3892 0.2827 8 8 0.0042 -2.4407 -0.3933 9 7 2.2582 -2.7430 -1.3517 10 6 3.6599 -3.1651 -1.2963 11 1 3.9838 -3.4267 -0.2889 12 6 4.0291 -4.2162 -2.3564 13 6 4.3642 -3.0417 -3.2908 14 8 3.2504 -2.5845 -4.0606 15 6 5.6178 -3.2705 -4.1376 16 9 6.5759 -3.9505 -3.3780 17 9 5.2876 -4.0334 -5.2628 18 9 6.1362 -2.0370 -4.5461 19 6 4.6204 -2.2091 -2.0235 20 6 2.3511 -2.7421 2.4257 21 6 2.8523 -2.0138 3.4880 22 6 2.8939 -0.6334 3.4214 23 6 2.4347 0.0181 2.2922 24 1 -0.3932 0.3747 -0.8000 25 1 1.7924 -0.5139 -0.8899 26 1 1.5616 2.4678 1.2085 27 1 3.5347 1.7702 -0.0320 28 1 1.9155 -2.3015 -2.1445 29 1 4.8949 -4.8216 -2.0882 30 1 3.1815 -4.8136 -2.6927 31 1 3.0843 -3.1042 -4.8590 32 1 4.2503 -1.1862 -2.0908 33 1 5.6478 -2.2658 -1.6641 34 1 2.3190 -3.8205 2.4776 35 1 3.2116 -2.5229 4.3702 36 1 3.2852 -0.0642 4.2516 37 1 2.4668 1.0963 2.2404 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_17047582_2726874.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:13:30 Heat of formation + Delta-G solvation = -225.877155 kcal Electronic energy + Delta-G solvation = -31458.976416 eV Core-core repulsion = 26495.952772 eV Total energy + Delta-G solvation = -4963.023645 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.063 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -51.27600 -48.82406 -48.73093 -41.30735 -40.72036 -38.34896 -37.40002 -36.80061 -36.76176 -33.86067 -32.99040 -32.52242 -28.70797 -27.38668 -26.99420 -24.52467 -24.28468 -22.76068 -21.49949 -20.87380 -20.08908 -19.57336 -19.50628 -19.04658 -18.56043 -18.24869 -17.55634 -17.20938 -17.10818 -16.80848 -16.17150 -16.00942 -15.67902 -15.63631 -15.45178 -15.24001 -15.18792 -15.06293 -14.93691 -14.88237 -14.83850 -14.40027 -14.29653 -14.15382 -13.93106 -13.58316 -13.26385 -13.21686 -13.09754 -12.99883 -12.86870 -12.75406 -12.19403 -12.16172 -12.10330 -11.74801 -11.38499 -10.82886 -10.57261 -10.30049 -10.17042 -5.10122 -0.70561 -0.34421 0.00464 1.09210 1.41650 1.50414 1.76350 1.81811 2.20661 2.27274 2.47170 2.50450 2.69512 2.70595 3.13908 3.20429 3.26088 3.35971 3.38960 3.60337 3.68236 3.79922 3.85480 3.89583 3.94288 4.12891 4.19999 4.22787 4.32549 4.44363 4.45973 4.59299 4.63791 4.82431 4.91391 5.00637 5.13889 5.58867 5.80710 5.96416 6.66225 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.515 6.515 2 C -0.107 4.107 3 Si 0.695 3.305 4 C 0.031 3.969 5 C -0.658 4.658 6 S 2.689 3.311 7 O -0.956 6.956 8 O -0.922 6.922 9 N -1.097 6.097 10 C 0.142 3.858 11 H 0.116 0.884 12 C -0.169 4.169 13 C 0.063 3.937 14 O -0.512 6.512 15 C 0.434 3.566 16 F -0.174 7.174 17 F -0.182 7.182 18 F -0.175 7.175 19 C -0.129 4.129 20 C -0.022 4.022 21 C -0.133 4.133 22 C -0.057 4.057 23 C -0.144 4.144 24 H 0.385 0.615 25 H 0.073 0.927 26 H -0.247 1.247 27 H -0.251 1.251 28 H 0.426 0.574 29 H 0.118 0.882 30 H 0.103 0.897 31 H 0.395 0.605 32 H 0.104 0.896 33 H 0.121 0.879 34 H 0.148 0.852 35 H 0.138 0.862 36 H 0.136 0.864 37 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.870 2.456 -0.893 3.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.321 6.321 2 C -0.218 4.218 3 Si 0.595 3.405 4 C 0.030 3.970 5 C -0.744 4.744 6 S 2.777 3.223 7 O -0.946 6.946 8 O -0.912 6.912 9 N -0.857 5.857 10 C 0.033 3.967 11 H 0.134 0.866 12 C -0.208 4.208 13 C 0.019 3.981 14 O -0.319 6.319 15 C 0.379 3.621 16 F -0.155 7.155 17 F -0.163 7.163 18 F -0.156 7.156 19 C -0.168 4.168 20 C -0.041 4.041 21 C -0.152 4.152 22 C -0.075 4.075 23 C -0.162 4.162 24 H 0.233 0.767 25 H 0.091 0.909 26 H -0.171 1.171 27 H -0.176 1.176 28 H 0.264 0.736 29 H 0.137 0.863 30 H 0.121 0.879 31 H 0.246 0.754 32 H 0.122 0.878 33 H 0.139 0.861 34 H 0.166 0.834 35 H 0.156 0.844 36 H 0.154 0.846 37 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.747 2.609 0.724 3.857 hybrid contribution 0.762 -0.352 -0.499 0.977 sum 3.508 2.256 0.225 4.177 Atomic orbital electron populations 1.86651 1.14249 1.86384 1.44826 1.25062 0.88480 1.11782 0.96480 0.94771 0.80548 0.77676 0.87490 1.18928 0.92620 0.91515 0.93979 1.30834 1.18406 1.06082 1.19072 1.02288 0.73264 0.73792 0.72935 1.93602 1.86053 1.31230 1.83692 1.93706 1.36884 1.78206 1.82371 1.55581 1.20932 1.76079 1.33121 1.21332 0.80923 0.94450 0.99970 0.86630 1.24250 1.04746 0.96519 0.95310 1.23598 0.83802 1.00402 0.90272 1.86528 1.45664 1.58735 1.40997 1.21228 0.86991 0.74359 0.79494 1.93195 1.66504 1.80346 1.75495 1.93194 1.92308 1.76445 1.54360 1.93232 1.88395 1.42865 1.91099 1.23616 1.02041 1.00755 0.90396 1.21101 0.91092 1.00872 0.91050 1.21402 1.00388 0.94168 0.99251 1.21473 0.94136 0.94964 0.96897 1.21169 1.01173 0.99823 0.94058 0.76673 0.90897 1.17138 1.17578 0.73573 0.86336 0.87895 0.75398 0.87797 0.86100 0.83396 0.84365 0.84623 0.85199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.51 -0.60 10.52 -57.56 -0.61 -1.20 16 2 C -0.11 0.02 1.83 36.01 0.07 0.09 16 3 Si 0.70 -1.16 30.31 -169.99 -5.15 -6.32 16 4 C 0.03 0.05 5.28 -104.62 -0.55 -0.50 16 5 C -0.66 -1.07 5.85 -39.58 -0.23 -1.30 16 6 S 2.69 4.59 4.92 -107.50 -0.53 4.06 16 7 O -0.96 -3.87 16.76 -57.17 -0.96 -4.83 16 8 O -0.92 -3.96 15.07 -66.35 -1.00 -4.96 16 9 N -1.10 1.85 4.37 -4.20 -0.02 1.84 16 10 C 0.14 -0.40 4.44 -67.12 -0.30 -0.69 16 11 H 0.12 -0.45 8.05 -51.93 -0.42 -0.87 16 12 C -0.17 0.51 7.15 -25.92 -0.19 0.32 16 13 C 0.06 -0.17 1.36 -89.81 -0.12 -0.29 16 14 O -0.51 1.66 12.00 -35.23 -0.42 1.24 16 15 C 0.43 -0.45 2.85 37.16 0.11 -0.35 16 16 F -0.17 0.10 15.75 2.25 0.04 0.14 16 17 F -0.18 0.07 16.65 2.25 0.04 0.10 16 18 F -0.17 -0.08 17.18 2.25 0.04 -0.05 16 19 C -0.13 0.45 7.05 -25.92 -0.18 0.27 16 20 C -0.02 -0.02 9.55 -39.59 -0.38 -0.39 16 21 C -0.13 0.05 10.05 -39.59 -0.40 -0.35 16 22 C -0.06 0.01 10.05 -39.58 -0.40 -0.39 16 23 C -0.14 -0.17 8.66 -39.59 -0.34 -0.51 16 24 H 0.39 -1.31 8.86 45.56 0.40 -0.91 16 25 H 0.07 -0.18 5.77 -51.93 -0.30 -0.48 16 26 H -0.25 -0.26 6.71 56.52 0.38 0.12 16 27 H -0.25 0.00 7.11 56.52 0.40 0.40 16 28 H 0.43 -1.21 7.23 -34.46 -0.25 -1.46 16 29 H 0.12 -0.46 7.13 -51.93 -0.37 -0.83 16 30 H 0.10 -0.29 8.14 -51.92 -0.42 -0.72 16 31 H 0.39 -2.25 8.42 45.56 0.38 -1.87 16 32 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 33 H 0.12 -0.56 7.88 -51.93 -0.41 -0.97 16 34 H 0.15 -0.06 7.34 -52.48 -0.39 -0.45 16 35 H 0.14 -0.39 8.06 -52.48 -0.42 -0.81 16 36 H 0.14 -0.36 8.06 -52.49 -0.42 -0.78 16 37 H 0.13 0.06 4.92 -52.49 -0.26 -0.20 16 LS Contribution 329.46 15.07 4.96 4.96 Total: 0.00 -10.71 329.46 -9.04 -19.75 By element: Atomic # 1 Polarization: -8.12 SS G_CDS: -2.51 Total: -10.63 kcal Atomic # 6 Polarization: -1.19 SS G_CDS: -2.92 Total: -4.11 kcal Atomic # 7 Polarization: 1.85 SS G_CDS: -0.02 Total: 1.84 kcal Atomic # 8 Polarization: -6.76 SS G_CDS: -2.99 Total: -9.75 kcal Atomic # 9 Polarization: 0.08 SS G_CDS: 0.11 Total: 0.19 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.15 Total: -6.32 kcal Atomic # 16 Polarization: 4.59 SS G_CDS: -0.53 Total: 4.06 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -10.71 -9.04 -19.75 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17047582_2726874.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -206.127 kcal (2) G-P(sol) polarization free energy of solvation -10.712 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.038 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.751 kcal (6) G-S(sol) free energy of system = (1) + (5) -225.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds