Wall clock time and date at job start Fri Mar 5 2021 23:13:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.38236 * 119.99997 * 244.72727 * 4 2 1 6 6 C 1.38235 * 119.99991 * 179.73874 * 5 4 2 7 7 C 1.38236 * 119.99822 * 0.55171 * 6 5 4 8 8 S 1.76201 * 119.99927 * 179.72134 * 7 6 5 9 9 O 1.42100 * 106.40115 * 23.52130 * 8 7 6 10 10 O 1.42102 * 106.40335 * 156.44162 * 8 7 6 11 11 N 1.65599 * 107.21933 * 269.97801 * 8 7 6 12 12 C 1.46501 * 119.99675 * 65.00124 * 11 8 7 13 13 H 1.09002 * 112.85500 * 346.19644 * 12 11 8 14 14 C 1.53788 * 113.61430 * 117.50504 * 12 11 8 15 15 C 1.53779 * 87.08289 * 139.97949 * 14 12 11 16 16 O 1.42900 * 113.69103 * 89.12402 * 15 14 12 17 17 C 1.52996 * 113.61449 * 220.01641 * 15 14 12 18 18 F 1.39899 * 109.47308 * 157.49694 * 17 15 14 19 19 F 1.39900 * 109.47270 * 277.50231 * 17 15 14 20 20 F 1.39911 * 109.47012 * 37.49771 * 17 15 14 21 21 C 1.53779 * 87.08296 * 334.56620 * 15 14 12 22 22 C 1.38233 * 119.99933 * 359.70500 * 7 6 5 23 23 C 1.38229 * 120.00084 * 64.99665 * 4 2 1 24 24 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 25 25 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 26 26 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 27 27 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 28 28 H 1.07998 * 120.00048 * 359.97438 * 5 4 2 29 29 H 1.07998 * 120.00055 * 180.27232 * 6 5 4 30 30 H 0.96998 * 120.00684 * 245.00175 * 11 8 7 31 31 H 1.09006 * 113.61115 * 254.52944 * 14 12 11 32 32 H 1.09000 * 113.61443 * 25.42481 * 14 12 11 33 33 H 0.96704 * 113.99600 * 82.46326 * 16 15 14 34 34 H 1.09001 * 113.61374 * 270.88612 * 21 15 14 35 35 H 1.09000 * 113.61726 * 139.97951 * 21 15 14 36 36 H 1.08007 * 119.99752 * 179.97438 * 22 7 6 37 37 H 1.08003 * 120.00133 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6436 -0.0136 2.1885 6 6 3.0997 -0.6640 3.3198 7 6 2.8534 -2.0139 3.4875 8 16 3.4412 -2.8446 4.9259 9 8 3.6081 -1.8479 5.9249 10 8 2.6118 -3.9857 5.0974 11 7 4.9560 -3.4158 4.5776 12 6 6.0492 -2.4776 4.3109 13 1 5.7003 -1.4600 4.1350 14 6 7.2009 -2.5691 5.3259 15 6 8.1589 -2.3896 4.1365 16 8 8.4603 -1.0239 3.8431 17 6 9.4079 -3.2695 4.2173 18 9 9.9405 -3.4421 2.9352 19 9 10.3591 -2.6549 5.0386 20 9 9.0661 -4.5164 4.7519 21 6 7.0466 -2.9784 3.2529 22 6 2.1458 -2.7119 2.5269 23 6 1.6847 -2.0601 1.3984 24 1 -0.3934 0.4417 -0.7651 25 1 1.7923 -0.5139 -0.8900 26 1 1.5879 2.4585 -1.2243 27 1 1.5615 2.4679 1.2085 28 1 2.8404 1.0399 2.0551 29 1 3.6524 -0.1186 4.0704 30 1 5.1196 -4.3715 4.5500 31 1 7.2249 -1.7414 6.0348 32 1 7.2814 -3.5433 5.8083 33 1 9.1592 -0.6479 4.3957 34 1 7.0849 -4.0645 3.1685 35 1 6.9460 -2.4812 2.2881 36 1 1.9537 -3.7667 2.6577 37 1 1.1323 -2.6057 0.6476 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_17047602_13421422.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:13:35 Heat of formation + Delta-G solvation = -235.882537 kcal Electronic energy + Delta-G solvation = -30090.396617 eV Core-core repulsion = 25126.939106 eV Total energy + Delta-G solvation = -4963.457511 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.063 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -51.27287 -48.82095 -48.72728 -41.17987 -40.69625 -38.28995 -37.92402 -37.01371 -36.90127 -33.82354 -33.23392 -32.27606 -28.71693 -27.39315 -27.29951 -24.29438 -24.01142 -22.90576 -21.66308 -20.80142 -20.14724 -19.57755 -19.48980 -19.21863 -18.75422 -18.49458 -17.64372 -17.17464 -17.00891 -16.69255 -16.38825 -15.89712 -15.81759 -15.60315 -15.52801 -15.42377 -15.18304 -14.92877 -14.89938 -14.72806 -14.71129 -14.57665 -14.38359 -14.11689 -14.05500 -13.97428 -13.60677 -13.14880 -13.09852 -12.96691 -12.88265 -12.85066 -12.49331 -12.09935 -11.92398 -11.88946 -11.45336 -10.80073 -10.75836 -10.42221 -10.19524 -5.12935 -0.78700 -0.40454 0.13670 1.06882 1.37955 1.44427 1.78664 1.81334 2.20682 2.24647 2.47458 2.50688 2.63906 2.75082 3.07669 3.17910 3.22785 3.27654 3.38087 3.55208 3.60428 3.67250 3.72748 4.04199 4.07383 4.15684 4.21797 4.25402 4.31311 4.47317 4.51569 4.58740 4.74826 4.86648 4.90049 4.92853 5.20124 5.62290 5.68361 5.96654 6.22779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.086 4.086 3 Si 0.685 3.315 4 C -0.015 4.015 5 C -0.135 4.135 6 C -0.017 4.017 7 C -0.676 4.676 8 S 2.693 3.307 9 O -0.948 6.948 10 O -0.952 6.952 11 N -1.103 6.103 12 C 0.145 3.855 13 H 0.128 0.872 14 C -0.170 4.170 15 C 0.062 3.938 16 O -0.509 6.509 17 C 0.436 3.564 18 F -0.174 7.174 19 F -0.181 7.181 20 F -0.174 7.174 21 C -0.125 4.125 22 C -0.016 4.016 23 C -0.112 4.112 24 H 0.384 0.616 25 H 0.083 0.917 26 H -0.257 1.257 27 H -0.252 1.252 28 H 0.138 0.862 29 H 0.146 0.854 30 H 0.423 0.577 31 H 0.103 0.897 32 H 0.114 0.886 33 H 0.394 0.606 34 H 0.115 0.885 35 H 0.105 0.895 36 H 0.144 0.856 37 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.220 1.322 -4.348 5.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.196 4.196 3 Si 0.586 3.414 4 C -0.015 4.015 5 C -0.154 4.154 6 C -0.036 4.036 7 C -0.763 4.763 8 S 2.783 3.217 9 O -0.938 6.938 10 O -0.942 6.942 11 N -0.861 5.861 12 C 0.037 3.963 13 H 0.146 0.854 14 C -0.209 4.209 15 C 0.018 3.982 16 O -0.316 6.316 17 C 0.381 3.619 18 F -0.155 7.155 19 F -0.162 7.162 20 F -0.155 7.155 21 C -0.164 4.164 22 C -0.035 4.035 23 C -0.131 4.131 24 H 0.232 0.768 25 H 0.101 0.899 26 H -0.182 1.182 27 H -0.176 1.176 28 H 0.155 0.845 29 H 0.164 0.836 30 H 0.259 0.741 31 H 0.121 0.879 32 H 0.132 0.868 33 H 0.245 0.755 34 H 0.133 0.867 35 H 0.124 0.876 36 H 0.162 0.838 37 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.161 1.853 -3.438 4.463 hybrid contribution -0.264 -0.373 -0.944 1.049 sum 1.897 1.481 -4.382 4.999 Atomic orbital electron populations 1.86586 1.17175 1.80294 1.50040 1.24936 0.85042 1.11500 0.98108 0.95010 0.91479 0.74219 0.80723 1.19622 0.93943 0.94072 0.93876 1.21142 0.99954 1.00121 0.94150 1.20892 0.94516 0.92006 0.96187 1.30953 1.16424 1.06393 1.22538 1.02020 0.72231 0.73677 0.73820 1.93626 1.85324 1.60761 1.54107 1.93629 1.65421 1.49901 1.85262 1.55594 1.25384 1.16765 1.88379 1.22030 0.85575 0.93714 0.95008 0.85402 1.24285 0.93625 1.06106 0.96910 1.23274 0.89276 0.83939 1.01735 1.86618 1.60754 1.20653 1.63599 1.21129 0.86264 0.80407 0.74063 1.93235 1.87858 1.95596 1.38816 1.93198 1.67471 1.82513 1.73043 1.93198 1.92019 1.44001 1.86303 1.23598 0.90600 1.02595 0.99641 1.20975 0.91245 1.00128 0.91143 1.21172 0.99613 0.94055 0.98293 0.76756 0.89865 1.18228 1.17640 0.84464 0.83616 0.74138 0.87855 0.86785 0.75470 0.86679 0.87610 0.83803 0.84621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.07 12.81 -35.23 -0.45 -0.52 16 2 C -0.09 0.12 2.79 36.01 0.10 0.22 16 3 Si 0.69 -1.41 29.84 -169.99 -5.07 -6.48 16 4 C -0.01 0.00 5.38 -104.62 -0.56 -0.56 16 5 C -0.14 0.08 8.67 -39.58 -0.34 -0.27 16 6 C -0.02 0.01 9.26 -39.58 -0.37 -0.36 16 7 C -0.68 0.00 5.95 -39.58 -0.24 -0.23 16 8 S 2.69 0.86 5.68 -107.50 -0.61 0.25 16 9 O -0.95 -2.89 17.04 -57.17 -0.97 -3.86 16 10 O -0.95 -3.19 17.28 -57.17 -0.99 -4.18 16 11 N -1.10 3.35 5.79 -4.19 -0.02 3.33 16 12 C 0.14 -0.49 4.29 -67.11 -0.29 -0.78 16 13 H 0.13 -0.54 7.78 -51.93 -0.40 -0.94 16 14 C -0.17 0.56 7.15 -25.92 -0.19 0.37 16 15 C 0.06 -0.18 1.36 -89.81 -0.12 -0.30 16 16 O -0.51 1.53 13.42 -35.23 -0.47 1.06 16 17 C 0.44 -0.49 2.85 37.16 0.11 -0.39 16 18 F -0.17 -0.07 17.18 2.25 0.04 -0.03 16 19 F -0.18 0.09 16.65 2.25 0.04 0.13 16 20 F -0.17 0.12 15.75 2.25 0.04 0.15 16 21 C -0.13 0.48 7.05 -25.92 -0.18 0.30 16 22 C -0.02 0.00 9.52 -39.58 -0.38 -0.38 16 23 C -0.11 -0.01 9.69 -39.59 -0.38 -0.39 16 24 H 0.38 -1.48 8.74 45.56 0.40 -1.08 16 25 H 0.08 -0.28 7.96 -51.93 -0.41 -0.69 16 26 H -0.26 0.00 7.11 56.52 0.40 0.40 16 27 H -0.25 -0.28 7.05 56.52 0.40 0.12 16 28 H 0.14 -0.34 4.87 -52.49 -0.26 -0.59 16 29 H 0.15 -0.34 7.62 -52.49 -0.40 -0.74 16 30 H 0.42 -2.06 8.94 -34.48 -0.31 -2.37 16 31 H 0.10 -0.37 8.14 -51.93 -0.42 -0.80 16 32 H 0.11 -0.41 7.13 -51.93 -0.37 -0.78 16 33 H 0.39 -2.27 8.42 45.56 0.38 -1.88 16 34 H 0.11 -0.56 7.88 -51.93 -0.41 -0.97 16 35 H 0.11 -0.44 8.14 -51.93 -0.42 -0.87 16 36 H 0.14 -0.20 7.62 -52.48 -0.40 -0.60 16 37 H 0.14 -0.16 8.06 -52.48 -0.42 -0.58 16 LS Contribution 340.87 15.07 5.14 5.14 Total: 0.00 -11.34 340.87 -8.83 -20.17 By element: Atomic # 1 Polarization: -9.73 SS G_CDS: -2.65 Total: -12.37 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: -2.84 Total: -2.77 kcal Atomic # 7 Polarization: 3.35 SS G_CDS: -0.02 Total: 3.33 kcal Atomic # 8 Polarization: -4.62 SS G_CDS: -2.89 Total: -7.50 kcal Atomic # 9 Polarization: 0.14 SS G_CDS: 0.11 Total: 0.25 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.07 Total: -6.48 kcal Atomic # 16 Polarization: 0.86 SS G_CDS: -0.61 Total: 0.25 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -11.34 -8.83 -20.17 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17047602_13421422.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -215.714 kcal (2) G-P(sol) polarization free energy of solvation -11.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.832 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.168 kcal (6) G-S(sol) free energy of system = (1) + (5) -235.883 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds