Wall clock time and date at job start Fri Mar 5 2021 23:13:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.46605 * 2 1 4 4 C 1.50700 * 109.47174 * 119.99919 * 2 1 3 5 5 C 1.33384 * 125.20147 * 50.18436 * 4 2 1 6 6 S 1.76206 * 122.54187 * 0.03142 * 5 4 2 7 7 O 1.42098 * 106.39967 * 51.08672 * 6 5 4 8 8 O 1.42104 * 106.39653 * 278.16665 * 6 5 4 9 9 N 1.65599 * 107.21767 * 164.62984 * 6 5 4 10 10 C 1.46501 * 119.99849 * 63.50147 * 9 6 5 11 11 H 1.08997 * 112.85353 * 355.45569 * 10 9 6 12 12 C 1.53787 * 113.61147 * 126.65257 * 10 9 6 13 13 C 1.53788 * 87.07760 * 140.06294 * 12 10 9 14 14 O 1.42896 * 113.61308 * 89.20370 * 13 12 10 15 15 C 1.53001 * 113.61041 * 220.01693 * 13 12 10 16 16 F 1.39900 * 109.47098 * 60.00600 * 15 13 12 17 17 F 1.39902 * 109.46997 * 180.02562 * 15 13 12 18 18 F 1.39903 * 109.47425 * 300.00203 * 15 13 12 19 19 C 1.53777 * 87.08242 * 334.56531 * 13 12 10 20 20 C 1.38426 * 114.92030 * 179.75720 * 5 4 2 21 21 C 1.33392 * 114.92090 * 0.24832 * 20 5 4 22 22 S 1.75883 * 125.20178 * 230.32726 * 4 2 1 23 23 H 0.96696 * 114.00601 * 306.71312 * 1 2 3 24 24 H 1.09001 * 109.47220 * 240.00067 * 2 1 3 25 25 H 1.48500 * 109.99653 * 178.68008 * 3 2 1 26 26 H 1.48495 * 110.00191 * 299.99593 * 3 2 1 27 27 H 0.96996 * 119.99709 * 243.50009 * 9 6 5 28 28 H 1.08996 * 113.61354 * 254.60817 * 12 10 9 29 29 H 1.09004 * 113.61641 * 25.51807 * 12 10 9 30 30 H 0.96704 * 114.00230 * 179.97438 * 14 13 12 31 31 H 1.08995 * 113.61595 * 270.88416 * 19 13 12 32 32 H 1.08997 * 113.61067 * 139.97917 * 19 13 12 33 33 H 1.07999 * 122.53972 * 180.22890 * 20 5 4 34 34 H 1.07993 * 125.20087 * 179.97438 * 21 20 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.5297 -1.9142 1.6412 6 16 0.3233 -2.8588 0.7710 7 8 0.7489 -2.9024 -0.5841 8 8 -0.9444 -2.3572 1.1718 9 7 0.4130 -4.4115 1.3396 10 6 0.0986 -4.6974 2.7416 11 1 -0.1026 -3.7972 3.3224 12 6 -0.9607 -5.7973 2.9234 13 6 -0.1162 -6.3059 4.1038 14 8 -0.4583 -5.7037 5.3537 15 6 -0.0298 -7.8314 4.1832 16 9 0.5503 -8.3273 3.0107 17 9 0.7540 -8.1975 5.2827 18 9 -1.3151 -8.3643 4.3292 19 6 1.0952 -5.6553 3.4154 20 6 2.1367 -2.3678 2.7996 21 6 3.0276 -1.5301 3.3324 22 16 3.1344 -0.0774 2.3465 23 1 -0.3934 0.5281 0.7081 24 1 1.7924 -0.5138 -0.8900 25 1 3.5345 1.7704 0.0321 26 1 1.5614 2.4679 -1.2085 27 1 0.6736 -5.1316 0.7443 28 1 -1.9388 -5.4172 3.2181 29 1 -1.0112 -6.4971 2.0892 30 1 0.0692 -6.0197 6.1001 31 1 1.6068 -6.3162 2.7157 32 1 1.7768 -5.1604 4.1072 33 1 1.9063 -3.3271 3.2389 34 1 3.5959 -1.7153 4.2319 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_17047602_14772022.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:13:38 Heat of formation + Delta-G solvation = -224.476120 kcal Electronic energy + Delta-G solvation = -29350.936722 eV Core-core repulsion = 24477.126077 eV Total energy + Delta-G solvation = -4873.810645 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.019 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -51.29702 -48.85227 -48.74060 -41.27411 -39.68121 -38.07163 -37.73600 -37.01337 -36.68178 -33.85581 -31.90329 -28.75631 -27.63803 -27.42461 -24.62237 -24.10498 -21.80577 -21.66546 -20.61086 -20.08238 -19.59600 -19.51738 -19.26829 -18.41301 -17.97286 -17.64082 -17.12127 -16.85096 -16.52252 -16.45317 -15.91505 -15.62395 -15.54407 -15.49559 -15.33196 -15.20570 -14.96464 -14.91414 -14.82476 -14.54821 -14.35490 -14.13899 -14.10506 -13.96978 -13.49886 -13.10335 -12.98257 -12.92478 -12.83817 -12.80291 -12.56799 -12.16999 -12.00073 -11.64093 -11.52132 -10.99302 -10.82062 -10.26889 -9.90802 -5.29305 -0.71745 -0.57363 0.24940 0.53220 0.96063 1.03301 1.35533 1.42359 1.75800 1.88216 2.19040 2.42739 2.46704 2.64738 2.72889 3.10625 3.14857 3.23125 3.27566 3.35051 3.53504 3.64281 3.86367 4.00482 4.12155 4.16568 4.22209 4.26370 4.35022 4.49407 4.61470 4.71585 4.88035 4.97427 5.69361 5.93701 6.30184 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.075 4.075 3 Si 0.671 3.329 4 C -0.097 4.097 5 C -0.660 4.660 6 S 2.715 3.285 7 O -0.948 6.948 8 O -0.934 6.934 9 N -1.107 6.107 10 C 0.138 3.862 11 H 0.133 0.867 12 C -0.128 4.128 13 C 0.064 3.936 14 O -0.507 6.507 15 C 0.437 3.563 16 F -0.174 7.174 17 F -0.181 7.181 18 F -0.172 7.172 19 C -0.173 4.173 20 C -0.094 4.094 21 C -0.207 4.207 22 S 0.161 5.839 23 H 0.389 0.611 24 H 0.147 0.853 25 H -0.231 1.231 26 H -0.223 1.223 27 H 0.423 0.577 28 H 0.108 0.892 29 H 0.116 0.884 30 H 0.393 0.607 31 H 0.117 0.883 32 H 0.100 0.900 33 H 0.152 0.848 34 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.337 1.683 4.659 5.973 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.188 4.188 3 Si 0.568 3.432 4 C -0.218 4.218 5 C -0.759 4.759 6 S 2.800 3.200 7 O -0.938 6.938 8 O -0.923 6.923 9 N -0.865 5.865 10 C 0.030 3.970 11 H 0.151 0.849 12 C -0.167 4.167 13 C 0.019 3.981 14 O -0.314 6.314 15 C 0.382 3.618 16 F -0.155 7.155 17 F -0.163 7.163 18 F -0.153 7.153 19 C -0.213 4.213 20 C -0.122 4.122 21 C -0.342 4.342 22 S 0.425 5.575 23 H 0.238 0.762 24 H 0.164 0.836 25 H -0.155 1.155 26 H -0.146 1.146 27 H 0.259 0.741 28 H 0.127 0.873 29 H 0.134 0.866 30 H 0.244 0.756 31 H 0.135 0.865 32 H 0.119 0.881 33 H 0.169 0.831 34 H 0.193 0.807 Dipole moment (debyes) X Y Z Total from point charges 3.755 4.026 2.965 6.253 hybrid contribution 0.539 -2.878 0.691 3.009 sum 4.294 1.148 3.657 5.756 Atomic orbital electron populations 1.86602 1.15419 1.74973 1.56323 1.25117 0.86395 1.11714 0.95541 0.94888 0.82228 0.76141 0.89926 1.24981 0.99714 0.96780 1.00356 1.29857 1.23893 1.09745 1.12361 1.01667 0.73805 0.71679 0.72850 1.93599 1.83089 1.85691 1.31434 1.93619 1.37247 1.78411 1.83048 1.55667 1.85101 1.27253 1.18527 1.22143 0.94906 0.98709 0.81236 0.84948 1.23651 1.00447 0.98418 0.94166 1.23261 1.01132 0.85033 0.88676 1.86660 1.63770 1.65321 1.15684 1.21103 0.74144 0.92631 0.73945 1.93196 1.84548 1.89408 1.48354 1.93196 1.75147 1.93320 1.54620 1.93244 1.38429 1.88328 1.95331 1.24348 0.96674 0.99513 1.00745 1.19845 0.96932 1.01355 0.94082 1.25904 1.05174 0.97923 1.05248 1.84454 1.37529 1.19168 1.16358 0.76231 0.83597 1.15544 1.14606 0.74134 0.87318 0.86569 0.75610 0.86489 0.88124 0.83096 0.80682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.74 10.93 -47.06 -0.51 -1.26 16 2 C -0.08 -0.05 2.17 36.01 0.08 0.03 16 3 Si 0.67 -0.98 30.91 -169.99 -5.25 -6.24 16 4 C -0.10 -0.06 5.78 -36.00 -0.21 -0.26 16 5 C -0.66 -0.44 5.72 -41.21 -0.24 -0.68 16 6 S 2.71 5.07 4.36 -107.50 -0.47 4.60 16 7 O -0.95 -4.67 17.15 -57.17 -0.98 -5.65 16 8 O -0.93 -4.03 16.98 -63.08 -1.07 -5.10 16 9 N -1.11 2.01 5.60 -4.19 -0.02 1.98 16 10 C 0.14 -0.37 2.65 -67.11 -0.18 -0.55 16 11 H 0.13 -0.40 7.32 -51.93 -0.38 -0.78 16 12 C -0.13 0.30 7.06 -25.91 -0.18 0.11 16 13 C 0.06 -0.17 1.36 -89.81 -0.12 -0.29 16 14 O -0.51 1.36 13.42 -35.23 -0.47 0.89 16 15 C 0.44 -0.42 2.85 37.16 0.11 -0.32 16 16 F -0.17 0.11 15.75 2.25 0.04 0.15 16 17 F -0.18 0.13 16.65 2.25 0.04 0.16 16 18 F -0.17 -0.16 17.18 2.25 0.04 -0.12 16 19 C -0.17 0.73 6.50 -25.92 -0.17 0.56 16 20 C -0.09 0.13 9.23 -41.21 -0.38 -0.25 16 21 C -0.21 0.41 11.23 29.04 0.33 0.73 16 22 S 0.16 -0.20 20.64 -107.50 -2.22 -2.42 16 23 H 0.39 -1.06 8.57 45.56 0.39 -0.67 16 24 H 0.15 0.20 7.68 -51.93 -0.40 -0.19 16 25 H -0.23 0.02 7.11 56.52 0.40 0.42 16 26 H -0.22 -0.20 7.11 56.52 0.40 0.20 16 27 H 0.42 -1.55 8.96 -34.46 -0.31 -1.86 16 28 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 29 H 0.12 -0.38 7.88 -51.93 -0.41 -0.79 16 30 H 0.39 -2.29 8.42 45.56 0.38 -1.90 16 31 H 0.12 -0.56 7.13 -51.93 -0.37 -0.93 16 32 H 0.10 -0.59 7.34 -51.93 -0.38 -0.97 16 33 H 0.15 -0.58 4.17 -52.49 -0.22 -0.80 16 34 H 0.18 -0.79 8.06 -52.49 -0.42 -1.21 16 LS Contribution 322.00 15.07 4.85 4.85 Total: 0.00 -10.44 322.00 -8.74 -19.18 By element: Atomic # 1 Polarization: -8.38 SS G_CDS: -1.74 Total: -10.11 kcal Atomic # 6 Polarization: 0.05 SS G_CDS: -0.97 Total: -0.91 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -0.02 Total: 1.98 kcal Atomic # 8 Polarization: -8.09 SS G_CDS: -3.04 Total: -11.13 kcal Atomic # 9 Polarization: 0.08 SS G_CDS: 0.11 Total: 0.19 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.25 Total: -6.24 kcal Atomic # 16 Polarization: 4.87 SS G_CDS: -2.69 Total: 2.18 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -10.44 -8.74 -19.18 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17047602_14772022.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -205.293 kcal (2) G-P(sol) polarization free energy of solvation -10.443 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -215.735 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.741 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.183 kcal (6) G-S(sol) free energy of system = (1) + (5) -224.476 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds