Wall clock time and date at job start Fri Mar 5 2021 23:13:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.33395 * 125.20224 * 299.99654 * 4 2 1 6 6 C 1.38424 * 114.91887 * 179.97438 * 5 4 2 7 7 S 1.76198 * 122.53538 * 180.02562 * 6 5 4 8 8 O 1.42098 * 106.40453 * 203.53718 * 7 6 5 9 9 O 1.42096 * 106.40638 * 336.46173 * 7 6 5 10 10 N 1.65603 * 107.21636 * 90.00106 * 7 6 5 11 11 C 1.46501 * 119.99963 * 64.99879 * 10 7 6 12 12 H 1.08998 * 112.85118 * 13.80402 * 11 10 7 13 13 C 1.53786 * 113.61554 * 145.00128 * 11 10 7 14 14 C 1.53787 * 87.08083 * 139.97668 * 13 11 10 15 15 O 1.42899 * 113.60929 * 89.11798 * 14 13 11 16 16 C 1.52992 * 113.61406 * 219.93477 * 14 13 11 17 17 F 1.39898 * 109.47335 * 60.00022 * 16 14 13 18 18 F 1.39900 * 109.47066 * 180.02562 * 16 14 13 19 19 F 1.39908 * 109.46954 * 300.00147 * 16 14 13 20 20 C 1.53776 * 87.08149 * 334.56702 * 14 13 11 21 21 C 1.33380 * 114.92301 * 359.97438 * 6 5 4 22 22 S 1.75881 * 125.20547 * 119.69313 * 4 2 1 23 23 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 24 24 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 25 25 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 26 26 H 1.48492 * 109.99800 * 181.32238 * 3 2 1 27 27 H 1.08003 * 122.53394 * 359.95291 * 5 4 2 28 28 H 0.96999 * 119.99898 * 245.00071 * 10 7 6 29 29 H 1.08998 * 113.61344 * 254.53055 * 13 11 10 30 30 H 1.09004 * 113.60715 * 25.34967 * 13 11 10 31 31 H 0.96698 * 114.00141 * 180.02562 * 15 14 13 32 32 H 1.08997 * 113.62067 * 270.87959 * 20 14 13 33 33 H 1.09007 * 113.61346 * 139.98091 * 20 14 13 34 34 H 1.08007 * 125.20393 * 180.02562 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.6739 -1.9812 -1.5437 6 6 2.2439 -2.4171 -2.7274 7 16 2.0333 -4.0585 -3.3325 8 8 3.1356 -4.3138 -4.1922 9 8 1.7241 -4.8655 -2.2046 10 7 0.6830 -4.0579 -4.2913 11 6 0.6667 -3.2808 -5.5331 12 1 1.6591 -2.9475 -5.8369 13 6 -0.1332 -3.9461 -6.6657 14 6 -0.6556 -2.5425 -7.0148 15 8 0.1708 -1.8392 -7.9447 16 6 -2.1363 -2.5176 -7.3989 17 9 -2.9032 -2.9947 -6.3305 18 9 -2.5184 -1.2056 -7.6986 19 9 -2.3411 -3.3301 -8.5193 20 6 -0.3914 -2.1649 -5.5477 21 6 2.9638 -1.5003 -3.3757 22 16 2.9405 0.0115 -2.4770 23 1 -0.3934 0.4416 -0.7651 24 1 1.7924 -0.5138 0.8900 25 1 1.5613 2.4680 1.2084 26 1 3.5344 1.7705 -0.0322 27 1 1.0670 -2.6215 -0.9207 28 1 -0.0971 -4.5720 -4.0306 29 1 0.4926 -4.3850 -7.4427 30 1 -0.9080 -4.6262 -6.3117 31 1 -0.1523 -0.9555 -8.1679 32 1 -1.2376 -2.3570 -4.8882 33 1 0.0260 -1.1658 -5.4223 34 1 3.4789 -1.6605 -4.3114 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_17047602_15065232.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:13:41 Heat of formation + Delta-G solvation = -236.977344 kcal Electronic energy + Delta-G solvation = -28880.390743 eV Core-core repulsion = 24006.038005 eV Total energy + Delta-G solvation = -4874.352739 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.019 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -51.20107 -48.74313 -48.68591 -40.93246 -39.47194 -38.42004 -37.51696 -37.05416 -36.78172 -33.62373 -31.80569 -28.56789 -27.20641 -27.08476 -24.90933 -23.96104 -21.57074 -21.28352 -20.44262 -19.88930 -19.49476 -19.38678 -19.10644 -18.60263 -17.86227 -17.65839 -17.28594 -16.64089 -16.31673 -16.26477 -15.80033 -15.54326 -15.46531 -15.43238 -15.12429 -14.95165 -14.86518 -14.84128 -14.51936 -14.46260 -14.25896 -14.10465 -13.91788 -13.85966 -13.40191 -13.37017 -13.25089 -12.91928 -12.84371 -12.58590 -12.55124 -12.20380 -11.88641 -11.62321 -11.23691 -10.68182 -10.59445 -10.14671 -9.81150 -5.19037 -0.81702 -0.45915 0.35287 0.60525 0.99751 1.17825 1.51911 1.55053 1.86067 2.02434 2.47311 2.62810 2.65225 2.70379 2.92755 3.19631 3.39576 3.43829 3.48403 3.56006 3.65456 3.91211 3.97788 4.19335 4.33759 4.39518 4.49353 4.55667 4.66389 4.76877 4.87091 4.92813 5.05912 5.18244 5.95803 6.36996 6.67299 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.033 4.033 3 Si 0.734 3.266 4 C -0.236 4.236 5 C -0.054 4.054 6 C -0.691 4.691 7 S 2.724 3.276 8 O -0.979 6.979 9 O -0.988 6.988 10 N -1.090 6.090 11 C 0.137 3.863 12 H 0.137 0.863 13 C -0.130 4.130 14 C 0.068 3.932 15 O -0.518 6.518 16 C 0.433 3.567 17 F -0.177 7.177 18 F -0.184 7.184 19 F -0.187 7.187 20 C -0.164 4.164 21 C -0.085 4.085 22 S 0.194 5.806 23 H 0.398 0.602 24 H 0.118 0.882 25 H -0.272 1.272 26 H -0.264 1.264 27 H 0.149 0.851 28 H 0.432 0.568 29 H 0.103 0.897 30 H 0.123 0.877 31 H 0.405 0.595 32 H 0.120 0.880 33 H 0.117 0.883 34 H 0.206 0.794 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.335 6.157 -3.028 6.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.145 4.145 3 Si 0.637 3.363 4 C -0.354 4.354 5 C -0.083 4.083 6 C -0.793 4.793 7 S 2.814 3.186 8 O -0.969 6.969 9 O -0.978 6.978 10 N -0.851 5.851 11 C 0.029 3.971 12 H 0.155 0.845 13 C -0.169 4.169 14 C 0.023 3.977 15 O -0.327 6.327 16 C 0.378 3.622 17 F -0.158 7.158 18 F -0.166 7.166 19 F -0.169 7.169 20 C -0.204 4.204 21 C -0.225 4.225 22 S 0.458 5.542 23 H 0.248 0.752 24 H 0.135 0.865 25 H -0.198 1.198 26 H -0.189 1.189 27 H 0.167 0.833 28 H 0.270 0.730 29 H 0.121 0.879 30 H 0.142 0.858 31 H 0.258 0.742 32 H 0.138 0.862 33 H 0.135 0.865 34 H 0.223 0.777 Dipole moment (debyes) X Y Z Total from point charges 0.875 6.748 -2.100 7.121 hybrid contribution -1.742 -1.085 0.494 2.111 sum -0.868 5.662 -1.605 5.949 Atomic orbital electron populations 1.86517 1.16432 1.82093 1.50429 1.24563 0.85491 1.09668 0.94816 0.94280 0.79274 0.74932 0.87819 1.25160 1.07924 0.98951 1.03345 1.19616 0.98914 0.95122 0.94676 1.29741 1.15470 1.25806 1.08238 1.00827 0.72772 0.72895 0.72147 1.93585 1.52295 1.83967 1.67072 1.93572 1.84528 1.67244 1.52434 1.55245 1.34349 1.62056 1.33427 1.22226 1.00731 0.91423 0.82684 0.84515 1.23655 1.01303 0.93143 0.98811 1.23236 0.82880 0.99324 0.92228 1.86623 1.48627 1.34832 1.62597 1.21451 0.92460 0.73518 0.74751 1.93186 1.78280 1.88299 1.56055 1.93185 1.92988 1.37035 1.93360 1.93212 1.96142 1.73520 1.53986 1.24345 1.01298 1.02356 0.92373 1.26262 0.97152 0.95760 1.03288 1.84305 1.45855 1.11386 1.12662 0.75210 0.86495 1.19758 1.18946 0.83316 0.73031 0.87885 0.85847 0.74168 0.86176 0.86479 0.77687 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.51 12.86 -148.98 -1.92 -0.41 16 2 C -0.03 0.09 2.96 71.23 0.21 0.31 16 3 Si 0.73 -3.24 30.97 68.60 2.12 -1.11 16 4 C -0.24 0.62 5.72 24.59 0.14 0.76 16 5 C -0.05 0.03 9.56 21.22 0.20 0.23 16 6 C -0.69 1.26 5.86 21.21 0.12 1.38 16 7 S 2.72 1.83 5.77 -56.49 -0.33 1.51 16 8 O -0.98 -5.85 17.16 -128.00 -2.20 -8.05 16 9 O -0.99 -8.09 17.63 -128.00 -2.26 -10.35 16 10 N -1.09 6.97 5.79 -167.18 -0.97 6.00 16 11 C 0.14 -1.10 4.36 45.52 0.20 -0.91 16 12 H 0.14 -1.24 7.77 -2.39 -0.02 -1.26 16 13 C -0.13 0.92 7.05 31.12 0.22 1.14 16 14 C 0.07 -0.48 1.36 -10.27 -0.01 -0.50 16 15 O -0.52 3.72 13.41 -148.98 -2.00 1.72 16 16 C 0.43 -1.34 2.85 71.98 0.21 -1.14 16 17 F -0.18 0.42 15.77 44.97 0.71 1.13 16 18 F -0.18 0.45 16.65 44.97 0.75 1.20 16 19 F -0.19 -0.23 17.18 44.97 0.77 0.55 16 20 C -0.16 1.72 7.15 31.12 0.22 1.95 16 21 C -0.09 0.44 10.70 66.72 0.71 1.16 16 22 S 0.19 -1.15 20.58 -56.49 -1.16 -2.31 16 23 H 0.40 -4.55 8.70 -74.06 -0.64 -5.19 16 24 H 0.12 -0.16 7.96 -2.39 -0.02 -0.18 16 25 H -0.27 -0.63 7.11 99.48 0.71 0.07 16 26 H -0.26 0.03 7.11 99.48 0.71 0.73 16 27 H 0.15 0.10 7.96 -2.91 -0.02 0.08 16 28 H 0.43 -4.13 8.94 -96.75 -0.87 -5.00 16 29 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 30 H 0.12 -1.11 7.89 -2.38 -0.02 -1.13 16 31 H 0.41 -5.37 8.42 -74.06 -0.62 -6.00 16 32 H 0.12 -1.34 7.14 -2.39 -0.02 -1.36 16 33 H 0.12 -1.62 8.14 -2.38 -0.02 -1.64 16 34 H 0.21 -2.00 8.00 -2.91 -0.02 -2.03 16 Total: 0.00 -24.16 334.62 -5.12 -29.28 By element: Atomic # 1 Polarization: -22.66 SS G_CDS: -0.88 Total: -23.53 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: 2.22 Total: 4.38 kcal Atomic # 7 Polarization: 6.97 SS G_CDS: -0.97 Total: 6.00 kcal Atomic # 8 Polarization: -8.72 SS G_CDS: -8.37 Total: -17.09 kcal Atomic # 9 Polarization: 0.65 SS G_CDS: 2.23 Total: 2.88 kcal Atomic # 14 Polarization: -3.24 SS G_CDS: 2.12 Total: -1.11 kcal Atomic # 16 Polarization: 0.68 SS G_CDS: -1.49 Total: -0.81 kcal Total: -24.16 -5.12 -29.28 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17047602_15065232.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -207.696 kcal (2) G-P(sol) polarization free energy of solvation -24.159 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -231.855 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.122 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.281 kcal (6) G-S(sol) free energy of system = (1) + (5) -236.977 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds