Wall clock time and date at job start Fri Mar 5 2021 23:13:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.47343 * 2 1 4 4 C 1.50699 * 109.47415 * 119.99927 * 2 1 3 5 5 C 1.38219 * 119.99709 * 75.91768 * 4 2 1 6 6 S 1.76199 * 119.99783 * 0.02562 * 5 4 2 7 7 O 1.42104 * 106.39819 * 177.29278 * 6 5 4 8 8 O 1.42095 * 106.40534 * 310.21285 * 6 5 4 9 9 N 1.65597 * 107.22055 * 63.75431 * 6 5 4 10 10 C 1.46501 * 120.00023 * 63.47876 * 9 6 5 11 11 H 1.09003 * 112.84667 * 13.88036 * 10 9 6 12 12 C 1.53784 * 113.61702 * 145.07796 * 10 9 6 13 13 C 1.53777 * 87.08297 * 139.97962 * 12 10 9 14 14 O 1.42906 * 113.61472 * 89.19987 * 13 12 10 15 15 C 1.52996 * 113.61494 * 220.01580 * 13 12 10 16 16 F 1.39904 * 109.46783 * 60.00895 * 15 13 12 17 17 F 1.39905 * 109.47236 * 180.02562 * 15 13 12 18 18 F 1.39894 * 109.47516 * 300.00173 * 15 13 12 19 19 C 1.53784 * 87.08395 * 334.57036 * 13 12 10 20 20 C 1.38259 * 119.99797 * 179.74637 * 5 4 2 21 21 C 1.38206 * 119.99992 * 0.55175 * 20 5 4 22 22 C 1.38264 * 120.00045 * 359.70115 * 21 20 5 23 23 C 1.38209 * 120.00102 * 0.02562 * 22 21 20 24 24 H 0.96705 * 113.99793 * 295.26023 * 1 2 3 25 25 H 1.08999 * 109.47229 * 240.00368 * 2 1 3 26 26 H 1.48501 * 110.00114 * 300.00125 * 3 2 1 27 27 H 1.48503 * 110.00081 * 61.31978 * 3 2 1 28 28 H 0.96998 * 120.00382 * 243.48268 * 9 6 5 29 29 H 1.09001 * 113.61309 * 254.53547 * 12 10 9 30 30 H 1.08998 * 113.60911 * 25.43087 * 12 10 9 31 31 H 0.96692 * 114.00354 * 180.02562 * 14 13 12 32 32 H 1.08995 * 113.61022 * 270.88461 * 19 13 12 33 33 H 1.08991 * 113.61456 * 139.97822 * 19 13 12 34 34 H 1.07995 * 119.99418 * 180.27385 * 20 5 4 35 35 H 1.07999 * 120.00304 * 179.72129 * 21 20 5 36 36 H 1.07997 * 119.99732 * 179.97438 * 22 21 20 37 37 H 1.07994 * 120.00412 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.8871 -2.0902 1.2982 6 16 1.2440 -3.0185 -0.0543 7 8 1.3931 -4.3885 0.2925 8 8 -0.0075 -2.4321 -0.3844 9 7 2.2411 -2.7528 -1.3495 10 6 3.6404 -3.1832 -1.2970 11 1 3.8422 -3.8675 -0.4729 12 6 4.1863 -3.6701 -2.6498 13 6 5.4929 -2.9403 -2.2962 14 8 6.4238 -3.7500 -1.5752 15 6 6.1306 -2.2156 -3.4832 16 9 5.2389 -1.2583 -3.9789 17 9 7.3081 -1.5851 -3.0668 18 9 6.4284 -3.1409 -4.4893 19 6 4.6458 -2.0238 -1.3977 20 6 2.3529 -2.7422 2.4249 21 6 2.8522 -2.0138 3.4881 22 6 2.8916 -0.6332 3.4224 23 6 2.4312 0.0183 2.2938 24 1 -0.3933 0.3770 0.7990 25 1 1.7923 -0.5138 -0.8900 26 1 1.5615 2.4679 -1.2085 27 1 1.5880 2.4586 1.2243 28 1 1.8986 -2.3121 -2.1428 29 1 4.2942 -4.7529 -2.7128 30 1 3.6672 -3.2447 -3.5086 31 1 7.2474 -3.2964 -1.3496 32 1 4.2523 -1.1484 -1.9143 33 1 5.1246 -1.7776 -0.4500 34 1 2.3224 -3.8205 2.4760 35 1 3.2118 -2.5228 4.3700 36 1 3.2813 -0.0641 4.2533 37 1 2.4616 1.0966 2.2426 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_17047602_2726874.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:13:51 Heat of formation + Delta-G solvation = -227.312901 kcal Electronic energy + Delta-G solvation = -31503.463264 eV Core-core repulsion = 26540.377361 eV Total energy + Delta-G solvation = -4963.085903 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.063 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -51.27124 -48.82239 -48.72053 -41.19275 -40.81044 -38.39155 -37.56541 -36.99702 -36.77245 -33.85651 -32.90488 -32.52694 -28.71649 -27.37955 -27.08644 -24.55804 -24.09719 -22.93086 -21.66896 -20.76594 -20.15664 -19.56548 -19.51356 -19.32211 -18.44574 -18.09409 -17.62278 -17.05898 -16.83560 -16.62744 -16.31039 -16.08663 -15.98890 -15.60008 -15.54821 -15.50627 -15.18100 -15.11673 -14.92554 -14.89224 -14.67660 -14.48323 -14.22201 -14.12583 -14.01480 -13.64717 -13.55037 -13.08321 -12.99044 -12.91517 -12.82031 -12.77804 -12.43841 -12.11186 -12.04221 -11.61319 -11.45682 -10.82478 -10.63344 -10.58240 -10.20413 -5.14059 -0.71059 -0.36373 -0.01021 1.03579 1.37785 1.41023 1.81394 1.84769 2.21770 2.27361 2.47390 2.50724 2.65700 2.76516 3.10161 3.17721 3.26700 3.33228 3.38416 3.41084 3.67984 3.71826 3.75925 3.99310 4.03028 4.16132 4.22809 4.25282 4.27433 4.43008 4.44855 4.59958 4.63415 4.83880 4.93803 4.97719 5.13633 5.57925 5.70925 5.97440 6.34844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.490 6.490 2 C -0.109 4.109 3 Si 0.691 3.309 4 C -0.016 4.016 5 C -0.656 4.656 6 S 2.683 3.317 7 O -0.957 6.957 8 O -0.922 6.922 9 N -1.106 6.106 10 C 0.142 3.858 11 H 0.132 0.868 12 C -0.123 4.123 13 C 0.064 3.936 14 O -0.508 6.508 15 C 0.436 3.564 16 F -0.173 7.173 17 F -0.181 7.181 18 F -0.173 7.173 19 C -0.176 4.176 20 C -0.021 4.021 21 C -0.132 4.132 22 C -0.056 4.056 23 C -0.144 4.144 24 H 0.374 0.626 25 H 0.116 0.884 26 H -0.250 1.250 27 H -0.256 1.256 28 H 0.422 0.578 29 H 0.106 0.894 30 H 0.115 0.885 31 H 0.393 0.607 32 H 0.115 0.885 33 H 0.101 0.899 34 H 0.146 0.854 35 H 0.137 0.863 36 H 0.135 0.865 37 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.102 2.863 3.036 6.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.295 6.295 2 C -0.218 4.218 3 Si 0.591 3.409 4 C -0.018 4.018 5 C -0.742 4.742 6 S 2.772 3.228 7 O -0.947 6.947 8 O -0.912 6.912 9 N -0.865 5.865 10 C 0.034 3.966 11 H 0.150 0.850 12 C -0.162 4.162 13 C 0.019 3.981 14 O -0.315 6.315 15 C 0.381 3.619 16 F -0.155 7.155 17 F -0.162 7.162 18 F -0.155 7.155 19 C -0.216 4.216 20 C -0.040 4.040 21 C -0.151 4.151 22 C -0.075 4.075 23 C -0.162 4.162 24 H 0.222 0.778 25 H 0.133 0.867 26 H -0.174 1.174 27 H -0.181 1.181 28 H 0.258 0.742 29 H 0.125 0.875 30 H 0.134 0.866 31 H 0.244 0.756 32 H 0.134 0.866 33 H 0.120 0.880 34 H 0.164 0.836 35 H 0.154 0.846 36 H 0.153 0.847 37 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 3.826 2.388 2.547 5.180 hybrid contribution 0.047 1.037 0.525 1.163 sum 3.874 3.425 3.071 6.014 Atomic orbital electron populations 1.86917 1.14737 1.83614 1.44281 1.25464 0.86473 1.12342 0.97556 0.95183 0.91151 0.73738 0.80809 1.19924 0.93813 0.92128 0.95887 1.30813 1.18380 1.06146 1.18847 1.02429 0.73367 0.73851 0.73143 1.93607 1.86105 1.31333 1.83615 1.93744 1.37164 1.77911 1.82355 1.55707 1.22000 1.76005 1.32777 1.22080 0.78980 0.95844 0.99661 0.85020 1.23550 0.90063 1.03757 0.98852 1.23258 0.90423 0.94634 0.89783 1.86649 1.30900 1.39705 1.74280 1.21123 0.77000 0.78077 0.85660 1.93196 1.67912 1.65452 1.88916 1.93196 1.49725 1.83374 1.89952 1.93238 1.93424 1.65582 1.63220 1.24370 0.96797 0.98833 1.01556 1.21094 0.90980 1.00851 0.91075 1.21418 1.00215 0.94339 0.99144 1.21497 0.94079 0.94817 0.97068 1.21321 1.00490 1.00483 0.93892 0.77831 0.86652 1.17405 1.18057 0.74169 0.87508 0.86643 0.75608 0.86634 0.87997 0.83609 0.84556 0.84666 0.84546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 32. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.49 -0.74 10.53 -57.69 -0.61 -1.35 16 2 C -0.11 0.11 1.86 36.01 0.07 0.17 16 3 Si 0.69 -1.48 30.37 -169.99 -5.16 -6.64 16 4 C -0.02 0.02 5.20 -104.62 -0.54 -0.53 16 5 C -0.66 0.06 5.85 -39.58 -0.23 -0.18 16 6 S 2.68 3.17 4.94 -107.50 -0.53 2.63 16 7 O -0.96 -3.71 16.56 -57.17 -0.95 -4.65 16 8 O -0.92 -4.00 15.03 -66.40 -1.00 -5.00 16 9 N -1.11 2.53 4.48 -4.19 -0.02 2.51 16 10 C 0.14 -0.43 4.34 -67.11 -0.29 -0.72 16 11 H 0.13 -0.38 7.82 -51.93 -0.41 -0.79 16 12 C -0.12 0.37 7.05 -25.92 -0.18 0.18 16 13 C 0.06 -0.19 1.36 -89.81 -0.12 -0.31 16 14 O -0.51 1.38 13.42 -35.23 -0.47 0.91 16 15 C 0.44 -0.59 2.85 37.16 0.11 -0.49 16 16 F -0.17 0.21 15.75 2.25 0.04 0.24 16 17 F -0.18 0.19 16.65 2.25 0.04 0.23 16 18 F -0.17 -0.10 17.18 2.25 0.04 -0.07 16 19 C -0.18 0.78 7.15 -25.91 -0.19 0.59 16 20 C -0.02 0.01 9.55 -39.59 -0.38 -0.36 16 21 C -0.13 0.27 10.05 -39.58 -0.40 -0.13 16 22 C -0.06 0.15 10.05 -39.58 -0.40 -0.25 16 23 C -0.14 0.30 8.66 -39.58 -0.34 -0.04 16 24 H 0.37 -0.47 8.76 45.56 0.40 -0.08 16 25 H 0.12 -0.28 5.81 -51.93 -0.30 -0.59 16 26 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 27 H -0.26 0.16 6.65 56.52 0.38 0.53 16 28 H 0.42 -1.69 8.66 -34.47 -0.30 -1.99 16 29 H 0.11 -0.27 8.14 -51.93 -0.42 -0.70 16 30 H 0.12 -0.48 7.88 -51.93 -0.41 -0.89 16 31 H 0.39 -2.27 8.42 45.56 0.38 -1.89 16 32 H 0.12 -0.63 7.13 -51.93 -0.37 -1.00 16 33 H 0.10 -0.57 8.14 -51.93 -0.42 -0.99 16 34 H 0.15 -0.17 7.34 -52.49 -0.39 -0.56 16 35 H 0.14 -0.55 8.06 -52.49 -0.42 -0.97 16 36 H 0.14 -0.65 8.06 -52.49 -0.42 -1.07 16 37 H 0.14 -0.47 4.88 -52.49 -0.26 -0.73 16 LS Contribution 331.71 15.07 5.00 5.00 Total: 0.00 -10.74 331.71 -9.09 -19.83 By element: Atomic # 1 Polarization: -9.03 SS G_CDS: -2.56 Total: -11.58 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -2.90 Total: -2.06 kcal Atomic # 7 Polarization: 2.53 SS G_CDS: -0.02 Total: 2.51 kcal Atomic # 8 Polarization: -7.07 SS G_CDS: -3.02 Total: -10.09 kcal Atomic # 9 Polarization: 0.29 SS G_CDS: 0.11 Total: 0.41 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.16 Total: -6.64 kcal Atomic # 16 Polarization: 3.17 SS G_CDS: -0.53 Total: 2.63 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -10.74 -9.09 -19.83 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17047602_2726874.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -207.483 kcal (2) G-P(sol) polarization free energy of solvation -10.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -218.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.085 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.830 kcal (6) G-S(sol) free energy of system = (1) + (5) -227.313 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds