Wall clock time and date at job start Fri Mar 5 2021 23:13:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.47343 * 2 1 4 4 C 1.50699 * 109.47415 * 119.99927 * 2 1 3 5 5 C 1.38219 * 119.99709 * 75.91768 * 4 2 1 6 6 S 1.76199 * 119.99783 * 0.02562 * 5 4 2 7 7 O 1.42104 * 106.39819 * 177.29278 * 6 5 4 8 8 O 1.42095 * 106.40534 * 310.21285 * 6 5 4 9 9 N 1.65597 * 107.22055 * 63.75431 * 6 5 4 10 10 C 1.46501 * 120.00023 * 63.47876 * 9 6 5 11 11 H 1.09003 * 112.84667 * 13.88036 * 10 9 6 12 12 C 1.53784 * 113.61702 * 145.07796 * 10 9 6 13 13 C 1.53777 * 87.08297 * 139.97962 * 12 10 9 14 14 O 1.42906 * 113.61472 * 89.19987 * 13 12 10 15 15 C 1.52996 * 113.61494 * 220.01580 * 13 12 10 16 16 F 1.39904 * 109.46783 * 60.00895 * 15 13 12 17 17 F 1.39905 * 109.47236 * 180.02562 * 15 13 12 18 18 F 1.39894 * 109.47516 * 300.00173 * 15 13 12 19 19 C 1.53784 * 87.08395 * 334.57036 * 13 12 10 20 20 C 1.38259 * 119.99797 * 179.74637 * 5 4 2 21 21 C 1.38206 * 119.99992 * 0.55175 * 20 5 4 22 22 C 1.38264 * 120.00045 * 359.70115 * 21 20 5 23 23 C 1.38209 * 120.00102 * 0.02562 * 22 21 20 24 24 H 0.96705 * 113.99793 * 295.26023 * 1 2 3 25 25 H 1.08999 * 109.47229 * 240.00368 * 2 1 3 26 26 H 1.48501 * 110.00114 * 300.00125 * 3 2 1 27 27 H 1.48503 * 110.00081 * 61.31978 * 3 2 1 28 28 H 0.96998 * 120.00382 * 243.48268 * 9 6 5 29 29 H 1.09001 * 113.61309 * 254.53547 * 12 10 9 30 30 H 1.08998 * 113.60911 * 25.43087 * 12 10 9 31 31 H 0.96692 * 114.00354 * 180.02562 * 14 13 12 32 32 H 1.08995 * 113.61022 * 270.88461 * 19 13 12 33 33 H 1.08991 * 113.61456 * 139.97822 * 19 13 12 34 34 H 1.07995 * 119.99418 * 180.27385 * 20 5 4 35 35 H 1.07999 * 120.00304 * 179.72129 * 21 20 5 36 36 H 1.07997 * 119.99732 * 179.97438 * 22 21 20 37 37 H 1.07994 * 120.00412 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.8871 -2.0902 1.2982 6 16 1.2440 -3.0185 -0.0543 7 8 1.3931 -4.3885 0.2925 8 8 -0.0075 -2.4321 -0.3844 9 7 2.2411 -2.7528 -1.3495 10 6 3.6404 -3.1832 -1.2970 11 1 3.8422 -3.8675 -0.4729 12 6 4.1863 -3.6701 -2.6498 13 6 5.4929 -2.9403 -2.2962 14 8 6.4238 -3.7500 -1.5752 15 6 6.1306 -2.2156 -3.4832 16 9 5.2389 -1.2583 -3.9789 17 9 7.3081 -1.5851 -3.0668 18 9 6.4284 -3.1409 -4.4893 19 6 4.6458 -2.0238 -1.3977 20 6 2.3529 -2.7422 2.4249 21 6 2.8522 -2.0138 3.4881 22 6 2.8916 -0.6332 3.4224 23 6 2.4312 0.0183 2.2938 24 1 -0.3933 0.3770 0.7990 25 1 1.7923 -0.5138 -0.8900 26 1 1.5615 2.4679 -1.2085 27 1 1.5880 2.4586 1.2243 28 1 1.8986 -2.3121 -2.1428 29 1 4.2942 -4.7529 -2.7128 30 1 3.6672 -3.2447 -3.5086 31 1 7.2474 -3.2964 -1.3496 32 1 4.2523 -1.1484 -1.9143 33 1 5.1246 -1.7776 -0.4500 34 1 2.3224 -3.8205 2.4760 35 1 3.2118 -2.5228 4.3700 36 1 3.2813 -0.0641 4.2533 37 1 2.4616 1.0966 2.2426 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_17047602_2726874.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:13:50 Heat of formation + Delta-G solvation = -232.476887 kcal Electronic energy + Delta-G solvation = -31503.687191 eV Core-core repulsion = 26540.377361 eV Total energy + Delta-G solvation = -4963.309830 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.063 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -51.17723 -48.71087 -48.66666 -40.95791 -40.66001 -38.50570 -37.57640 -36.96285 -36.79404 -33.69912 -32.77608 -32.37685 -28.56098 -27.09238 -26.96026 -24.42305 -23.93611 -22.79800 -21.44760 -20.74139 -20.00587 -19.47060 -19.42033 -19.23208 -18.46162 -18.05559 -17.44262 -16.93296 -16.72848 -16.43474 -16.16362 -16.02466 -15.86920 -15.53468 -15.49279 -15.40950 -15.09751 -15.00768 -14.84254 -14.82263 -14.50551 -14.36066 -14.12992 -13.95127 -13.84381 -13.48851 -13.39386 -13.22238 -13.11016 -12.91176 -12.79340 -12.57905 -12.35085 -12.00709 -11.87815 -11.52425 -11.22478 -10.70738 -10.50366 -10.43487 -10.05350 -4.98362 -0.72027 -0.26842 0.14915 1.17673 1.52223 1.54502 1.90580 1.94633 2.40755 2.48861 2.64376 2.66785 2.72151 2.93664 3.20930 3.35747 3.44693 3.48006 3.50269 3.57627 3.83171 3.94078 4.01263 4.17432 4.24269 4.36891 4.41352 4.51029 4.56401 4.59788 4.76884 4.81319 4.89173 5.00714 5.18447 5.19075 5.32692 5.77184 5.93236 6.38382 6.47678 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.517 6.517 2 C -0.128 4.128 3 Si 0.781 3.219 4 C -0.019 4.019 5 C -0.661 4.661 6 S 2.692 3.308 7 O -0.992 6.992 8 O -0.960 6.960 9 N -1.096 6.096 10 C 0.137 3.863 11 H 0.129 0.871 12 C -0.130 4.130 13 C 0.068 3.932 14 O -0.520 6.520 15 C 0.434 3.566 16 F -0.174 7.174 17 F -0.183 7.183 18 F -0.188 7.188 19 C -0.167 4.167 20 C -0.036 4.036 21 C -0.134 4.134 22 C -0.052 4.052 23 C -0.145 4.145 24 H 0.382 0.618 25 H 0.125 0.875 26 H -0.298 1.298 27 H -0.271 1.271 28 H 0.430 0.570 29 H 0.099 0.901 30 H 0.125 0.875 31 H 0.405 0.595 32 H 0.129 0.871 33 H 0.120 0.880 34 H 0.143 0.857 35 H 0.156 0.844 36 H 0.163 0.837 37 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.347 4.010 4.181 8.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.324 6.324 2 C -0.236 4.236 3 Si 0.684 3.316 4 C -0.021 4.021 5 C -0.750 4.750 6 S 2.784 3.216 7 O -0.982 6.982 8 O -0.950 6.950 9 N -0.857 5.857 10 C 0.030 3.970 11 H 0.147 0.853 12 C -0.169 4.169 13 C 0.024 3.976 14 O -0.329 6.329 15 C 0.380 3.620 16 F -0.156 7.156 17 F -0.164 7.164 18 F -0.169 7.169 19 C -0.206 4.206 20 C -0.055 4.055 21 C -0.152 4.152 22 C -0.070 4.070 23 C -0.163 4.163 24 H 0.230 0.770 25 H 0.142 0.858 26 H -0.226 1.226 27 H -0.197 1.197 28 H 0.268 0.732 29 H 0.118 0.882 30 H 0.144 0.856 31 H 0.258 0.742 32 H 0.147 0.853 33 H 0.138 0.862 34 H 0.161 0.839 35 H 0.174 0.826 36 H 0.181 0.819 37 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 5.073 3.499 3.683 7.179 hybrid contribution -0.305 0.699 0.165 0.780 sum 4.768 4.198 3.848 7.427 Atomic orbital electron populations 1.86883 1.16310 1.84122 1.45087 1.25854 0.85482 1.14022 0.98271 0.94274 0.89463 0.70733 0.77147 1.19926 0.94145 0.91699 0.96314 1.30484 1.19599 1.06466 1.18447 1.01718 0.73056 0.73128 0.73650 1.93556 1.86647 1.33655 1.84370 1.93692 1.39786 1.78324 1.83235 1.55388 1.22070 1.76028 1.32204 1.22172 0.78476 0.96778 0.99589 0.85344 1.23659 0.90446 1.03542 0.99299 1.23218 0.90152 0.94827 0.89449 1.86629 1.31717 1.40408 1.74142 1.21389 0.76972 0.77936 0.85748 1.93190 1.67882 1.65494 1.89016 1.93189 1.49927 1.83408 1.89900 1.93207 1.93564 1.66144 1.64016 1.24411 0.95564 0.98437 1.02211 1.21220 0.91690 1.01037 0.91568 1.21696 0.99527 0.94823 0.99191 1.21858 0.92943 0.94731 0.97494 1.21538 0.99943 1.01234 0.93590 0.76951 0.85779 1.22612 1.19719 0.73152 0.88216 0.85647 0.74168 0.85326 0.86202 0.83925 0.82585 0.81938 0.83014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.06 10.53 -127.50 -1.34 -3.40 16 2 C -0.13 0.24 1.86 71.24 0.13 0.38 16 3 Si 0.78 -3.84 30.37 68.60 2.08 -1.76 16 4 C -0.02 0.05 5.20 -19.86 -0.10 -0.06 16 5 C -0.66 -0.15 5.85 22.27 0.13 -0.02 16 6 S 2.69 10.41 4.94 -56.49 -0.28 10.13 16 7 O -0.99 -9.72 16.56 -128.00 -2.12 -11.84 16 8 O -0.96 -10.24 15.03 -119.18 -1.79 -12.03 16 9 N -1.10 4.16 4.48 -167.18 -0.75 3.41 16 10 C 0.14 -0.80 4.34 45.52 0.20 -0.61 16 11 H 0.13 -0.66 7.82 -2.39 -0.02 -0.67 16 12 C -0.13 0.72 7.05 31.12 0.22 0.94 16 13 C 0.07 -0.42 1.36 -10.27 -0.01 -0.43 16 14 O -0.52 2.93 13.42 -148.98 -2.00 0.94 16 15 C 0.43 -1.25 2.85 71.98 0.21 -1.04 16 16 F -0.17 0.49 15.75 44.97 0.71 1.19 16 17 F -0.18 0.46 16.65 44.97 0.75 1.21 16 18 F -0.19 -0.31 17.18 44.97 0.77 0.46 16 19 C -0.17 1.63 7.15 31.12 0.22 1.85 16 20 C -0.04 0.04 9.55 22.27 0.21 0.26 16 21 C -0.13 0.73 10.05 22.27 0.22 0.96 16 22 C -0.05 0.39 10.05 22.27 0.22 0.61 16 23 C -0.14 0.85 8.66 22.27 0.19 1.04 16 24 H 0.38 -0.59 8.76 -74.05 -0.65 -1.24 16 25 H 0.12 -0.59 5.81 -2.39 -0.01 -0.60 16 26 H -0.30 -0.94 7.11 99.48 0.71 -0.23 16 27 H -0.27 0.69 6.65 99.48 0.66 1.35 16 28 H 0.43 -3.14 8.66 -96.75 -0.84 -3.97 16 29 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 30 H 0.13 -1.00 7.88 -2.39 -0.02 -1.02 16 31 H 0.41 -4.88 8.42 -74.06 -0.62 -5.50 16 32 H 0.13 -1.58 7.13 -2.39 -0.02 -1.60 16 33 H 0.12 -1.55 8.14 -2.39 -0.02 -1.57 16 34 H 0.14 -0.18 7.34 -2.91 -0.02 -0.20 16 35 H 0.16 -1.54 8.06 -2.91 -0.02 -1.57 16 36 H 0.16 -2.11 8.06 -2.91 -0.02 -2.13 16 37 H 0.15 -1.39 4.88 -2.91 -0.01 -1.41 16 Total: 0.00 -25.56 331.71 -3.06 -28.62 By element: Atomic # 1 Polarization: -19.87 SS G_CDS: -0.93 Total: -20.80 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: 1.84 Total: 3.88 kcal Atomic # 7 Polarization: 4.16 SS G_CDS: -0.75 Total: 3.41 kcal Atomic # 8 Polarization: -19.09 SS G_CDS: -7.25 Total: -26.34 kcal Atomic # 9 Polarization: 0.63 SS G_CDS: 2.23 Total: 2.86 kcal Atomic # 14 Polarization: -3.84 SS G_CDS: 2.08 Total: -1.76 kcal Atomic # 16 Polarization: 10.41 SS G_CDS: -0.28 Total: 10.13 kcal Total: -25.56 -3.06 -28.62 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17047602_2726874.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -203.861 kcal (2) G-P(sol) polarization free energy of solvation -25.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.420 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.616 kcal (6) G-S(sol) free energy of system = (1) + (5) -232.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds