Wall clock time and date at job start Sat Mar 6 2021 01:47:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86302 * 109.47113 * 2 1 4 4 C 1.50709 * 109.46838 * 119.99869 * 2 1 3 5 5 C 1.38232 * 119.99886 * 64.99667 * 4 2 1 6 6 C 1.38241 * 119.99782 * 180.02562 * 5 4 2 7 7 C 1.38240 * 119.99912 * 0.02562 * 6 5 4 8 8 S 1.76197 * 120.00003 * 179.97438 * 7 6 5 9 9 O 1.42105 * 106.40051 * 336.46203 * 8 7 6 10 10 O 1.42093 * 106.40286 * 203.54030 * 8 7 6 11 11 N 1.65597 * 107.21776 * 89.99642 * 8 7 6 12 12 C 1.46499 * 119.99975 * 65.00109 * 11 8 7 13 13 C 1.52997 * 109.47695 * 214.99903 * 12 11 8 14 14 C 1.52997 * 109.47457 * 179.97438 * 13 12 11 15 15 C 1.53002 * 109.46817 * 60.00169 * 14 13 12 16 16 C 1.52996 * 109.47346 * 299.99737 * 15 14 13 17 17 C 1.53002 * 109.46891 * 59.99997 * 16 15 14 18 18 C 1.52997 * 109.46978 * 60.00410 * 17 16 15 19 19 C 1.53006 * 109.47164 * 299.99874 * 18 17 16 20 20 O 1.42895 * 109.47000 * 180.02562 * 19 18 17 21 21 C 1.52997 * 109.47127 * 59.99836 * 19 18 17 22 22 C 1.52999 * 109.46623 * 299.99900 * 19 18 17 23 23 C 1.38233 * 120.00031 * 0.24905 * 7 6 5 24 24 C 1.38237 * 120.00011 * 359.49653 * 23 7 6 25 25 H 0.96696 * 114.00234 * 300.00630 * 1 2 3 26 26 H 1.08999 * 109.47372 * 239.99614 * 2 1 3 27 27 H 1.48499 * 109.99988 * 299.99493 * 3 2 1 28 28 H 1.48494 * 109.99983 * 61.31755 * 3 2 1 29 29 H 1.07996 * 120.00029 * 0.02562 * 5 4 2 30 30 H 1.07998 * 119.99972 * 179.97438 * 6 5 4 31 31 H 0.96996 * 120.00033 * 245.00196 * 11 8 7 32 32 H 1.09004 * 109.47041 * 335.00025 * 12 11 8 33 33 H 1.09001 * 109.46989 * 59.99548 * 13 12 11 34 34 H 1.08993 * 109.47194 * 299.99651 * 14 13 12 35 35 H 1.09002 * 109.46695 * 179.97438 * 14 13 12 36 36 H 1.09004 * 109.46733 * 179.97438 * 15 14 13 37 37 H 1.08992 * 109.47554 * 180.02562 * 16 15 14 38 38 H 1.09004 * 109.47108 * 300.00289 * 16 15 14 39 39 H 1.09002 * 109.47097 * 180.02562 * 17 16 15 40 40 H 1.09000 * 109.47140 * 179.97438 * 18 17 16 41 41 H 1.09001 * 109.47375 * 59.99908 * 18 17 16 42 42 H 0.96696 * 114.00485 * 299.99339 * 20 19 18 43 43 H 1.09002 * 109.47153 * 180.02562 * 21 19 18 44 44 H 1.09001 * 109.46832 * 60.00321 * 21 19 18 45 45 H 1.09000 * 109.47486 * 299.99829 * 22 19 18 46 46 H 1.09002 * 109.46716 * 179.97438 * 22 19 18 47 47 H 1.07997 * 120.00057 * 179.72517 * 23 7 6 48 48 H 1.07999 * 120.00259 * 180.22872 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6845 -2.0601 1.3985 6 6 2.1448 -2.7117 2.5275 7 6 2.8514 -2.0133 3.4888 8 16 3.4375 -2.8435 4.9282 9 8 2.6080 -3.9846 5.0989 10 8 3.6030 -1.8465 5.9270 11 7 4.9527 -3.4147 4.5817 12 6 6.0461 -2.4765 4.3161 13 6 6.9785 -3.0666 3.2562 14 6 8.1200 -2.0865 2.9784 15 6 8.9054 -1.8397 4.2681 16 6 7.9732 -1.2496 5.3280 17 6 6.8316 -2.2296 5.6058 18 6 7.4077 -3.5530 6.1132 19 6 8.3401 -4.1432 5.0533 20 8 8.8777 -5.3795 5.5270 21 6 9.4816 -3.1631 4.7755 22 6 7.5546 -4.3900 3.7637 23 6 3.0932 -0.6623 3.3235 24 6 2.6374 -0.0119 2.1921 25 1 -0.3933 0.4418 0.7650 26 1 1.7923 -0.5139 -0.8899 27 1 1.5616 2.4679 -1.2085 28 1 1.5878 2.4585 1.2242 29 1 1.1322 -2.6056 0.6477 30 1 1.9517 -3.7661 2.6590 31 1 5.1163 -4.3703 4.5547 32 1 5.6360 -1.5334 3.9548 33 1 6.4190 -3.2421 2.3374 34 1 7.7095 -1.1438 2.6169 35 1 8.7844 -2.5072 2.2236 36 1 9.7190 -1.1418 4.0700 37 1 8.5328 -1.0733 6.2466 38 1 7.5627 -0.3067 4.9665 39 1 6.1672 -1.8090 6.3606 40 1 6.5944 -4.2511 6.3115 41 1 7.9673 -3.3772 7.0320 42 1 9.3891 -5.2988 6.3437 43 1 10.1456 -3.5834 4.0200 44 1 10.0412 -2.9873 5.6942 45 1 6.7413 -5.0883 3.9616 46 1 8.2189 -4.8101 3.0085 47 1 3.6413 -0.1157 4.0766 48 1 2.8295 1.0427 2.0611 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_17849790_13421422.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:47:09 Heat of formation + Delta-G solvation = -133.945916 kcal Electronic energy + Delta-G solvation = -33255.882777 eV Core-core repulsion = 28982.142359 eV Total energy + Delta-G solvation = -4273.740418 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.138 amu Computer time = 3.11 seconds Orbital eigenvalues (eV) -42.77755 -40.79636 -38.28830 -37.93094 -37.65555 -36.86300 -36.01209 -33.81732 -33.12570 -32.31567 -32.20863 -31.28506 -27.33865 -27.05690 -26.54650 -24.20530 -23.09870 -22.88548 -22.56239 -22.35499 -20.55994 -19.27292 -19.12993 -18.58663 -18.24348 -17.99450 -17.27808 -16.84996 -16.57972 -16.26737 -15.97174 -15.93517 -15.60659 -15.52015 -15.47690 -15.06360 -14.93948 -14.87535 -14.55451 -14.49464 -14.08802 -13.94305 -13.79633 -13.61464 -13.44074 -13.38088 -13.10353 -13.03594 -12.82677 -12.74109 -12.59835 -12.42653 -12.09373 -12.01157 -11.98036 -11.89880 -11.83120 -11.58808 -11.37651 -10.98676 -10.82758 -10.56521 -10.50551 -10.33260 -10.23610 -5.13303 -0.74109 -0.41836 0.09118 1.07437 1.43693 1.81190 1.84434 2.25893 2.70806 2.99894 3.14338 3.21916 3.33970 3.35929 3.38858 3.64627 3.66945 3.68932 3.78076 3.90750 3.95980 3.99619 4.05227 4.05997 4.11085 4.13909 4.19953 4.23589 4.28941 4.30958 4.46130 4.49939 4.58665 4.65269 4.71551 4.74148 4.84698 4.85261 4.89008 4.91017 4.94209 4.95725 4.97506 5.04024 5.08217 5.14569 5.19929 5.28802 5.37303 5.41285 5.59585 5.83890 6.19284 6.69003 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.084 4.084 3 Si 0.688 3.312 4 C -0.061 4.061 5 C -0.113 4.113 6 C -0.016 4.016 7 C -0.674 4.674 8 S 2.691 3.309 9 O -0.956 6.956 10 O -0.950 6.950 11 N -1.110 6.110 12 C 0.164 3.836 13 C -0.088 4.088 14 C -0.110 4.110 15 C -0.086 4.086 16 C -0.110 4.110 17 C -0.102 4.102 18 C -0.137 4.137 19 C 0.134 3.866 20 O -0.561 6.561 21 C -0.138 4.138 22 C -0.099 4.099 23 C -0.017 4.017 24 C -0.139 4.139 25 H 0.378 0.622 26 H 0.124 0.876 27 H -0.253 1.253 28 H -0.257 1.257 29 H 0.137 0.863 30 H 0.143 0.857 31 H 0.420 0.580 32 H 0.089 0.911 33 H 0.087 0.913 34 H 0.071 0.929 35 H 0.072 0.928 36 H 0.078 0.922 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.092 0.908 40 H 0.072 0.928 41 H 0.068 0.932 42 H 0.377 0.623 43 H 0.071 0.929 44 H 0.066 0.934 45 H 0.070 0.930 46 H 0.075 0.925 47 H 0.145 0.855 48 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.373 2.632 -2.648 6.543 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.194 4.194 3 Si 0.589 3.411 4 C -0.062 4.062 5 C -0.131 4.131 6 C -0.035 4.035 7 C -0.760 4.760 8 S 2.780 3.220 9 O -0.946 6.946 10 O -0.940 6.940 11 N -0.870 5.870 12 C 0.057 3.943 13 C -0.108 4.108 14 C -0.149 4.149 15 C -0.105 4.105 16 C -0.149 4.149 17 C -0.122 4.122 18 C -0.175 4.175 19 C 0.094 3.906 20 O -0.367 6.367 21 C -0.175 4.175 22 C -0.137 4.137 23 C -0.037 4.037 24 C -0.158 4.158 25 H 0.226 0.774 26 H 0.142 0.858 27 H -0.178 1.178 28 H -0.182 1.182 29 H 0.155 0.845 30 H 0.161 0.839 31 H 0.257 0.743 32 H 0.107 0.893 33 H 0.105 0.895 34 H 0.090 0.910 35 H 0.091 0.909 36 H 0.096 0.904 37 H 0.089 0.911 38 H 0.089 0.911 39 H 0.110 0.890 40 H 0.091 0.909 41 H 0.087 0.913 42 H 0.224 0.776 43 H 0.090 0.910 44 H 0.084 0.916 45 H 0.088 0.912 46 H 0.094 0.906 47 H 0.162 0.838 48 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 4.437 3.026 -2.950 6.127 hybrid contribution -0.756 -0.148 0.327 0.837 sum 3.681 2.879 -2.623 5.359 Atomic orbital electron populations 1.86634 1.17118 1.79985 1.49396 1.25201 0.84423 1.11487 0.98274 0.94965 0.91453 0.74062 0.80626 1.20681 0.94987 0.94836 0.95678 1.21203 0.99788 0.93995 0.98155 1.21009 0.91219 1.00154 0.91167 1.31026 1.16030 1.06362 1.22625 1.02048 0.72356 0.73652 0.73923 1.93622 1.65758 1.49881 1.85325 1.93609 1.85460 1.60841 1.54108 1.55696 1.25103 1.17167 1.89038 1.20811 0.86923 0.91352 0.95244 1.21342 0.96166 0.95186 0.98078 1.21593 0.96642 0.99217 0.97399 1.21076 0.97847 0.96536 0.95034 1.21587 0.96015 0.98003 0.99255 1.21571 0.97318 0.95861 0.97471 1.22171 0.99827 0.97107 0.98381 1.21094 0.92296 0.83554 0.93705 1.86550 1.72695 1.31530 1.45902 1.22205 0.97777 0.95606 1.01954 1.21406 0.99535 0.96814 0.95913 1.20913 0.94429 0.92038 0.96281 1.21210 0.99867 1.00237 0.94459 0.77386 0.85794 1.17803 1.18213 0.84507 0.83893 0.74340 0.89348 0.89500 0.91040 0.90948 0.90395 0.91136 0.91134 0.88993 0.90918 0.91322 0.77559 0.91028 0.91565 0.91175 0.90625 0.83754 0.84519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 37. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.12 12.83 -35.23 -0.45 -0.57 16 2 C -0.08 0.13 2.80 36.01 0.10 0.23 16 3 Si 0.69 -1.53 29.89 -169.99 -5.08 -6.61 16 4 C -0.06 0.06 5.35 -104.62 -0.56 -0.50 16 5 C -0.11 0.05 9.69 -39.58 -0.38 -0.33 16 6 C -0.02 0.00 9.52 -39.58 -0.38 -0.38 16 7 C -0.67 -0.02 5.82 -39.58 -0.23 -0.25 16 8 S 2.69 2.68 5.65 -107.50 -0.61 2.08 16 9 O -0.96 -3.98 17.28 -57.17 -0.99 -4.96 16 10 O -0.95 -3.16 16.54 -57.17 -0.95 -4.11 16 11 N -1.11 1.75 4.74 -4.89 -0.02 1.73 16 12 C 0.16 -0.37 2.25 -67.93 -0.15 -0.52 16 13 C -0.09 0.25 2.90 -90.62 -0.26 -0.01 16 14 C -0.11 0.36 5.19 -26.73 -0.14 0.22 16 15 C -0.09 0.24 3.19 -90.62 -0.29 -0.05 16 16 C -0.11 0.28 5.19 -26.73 -0.14 0.14 16 17 C -0.10 0.15 2.91 -90.62 -0.26 -0.11 16 18 C -0.14 0.16 4.66 -26.73 -0.12 0.03 16 19 C 0.13 -0.15 1.15 -90.62 -0.10 -0.26 16 20 O -0.56 -0.10 12.98 -35.23 -0.46 -0.55 16 21 C -0.14 0.27 4.82 -26.73 -0.13 0.14 16 22 C -0.10 0.14 4.66 -26.73 -0.12 0.02 16 23 C -0.02 0.02 8.92 -39.58 -0.35 -0.34 16 24 C -0.14 0.21 8.67 -39.58 -0.34 -0.14 16 25 H 0.38 -0.92 8.70 45.56 0.40 -0.52 16 26 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 27 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 28 H -0.26 0.07 7.01 56.52 0.40 0.47 16 29 H 0.14 -0.19 8.06 -52.49 -0.42 -0.61 16 30 H 0.14 -0.14 7.62 -52.49 -0.40 -0.54 16 31 H 0.42 -1.02 6.82 -34.47 -0.24 -1.25 16 32 H 0.09 -0.31 7.25 -51.93 -0.38 -0.68 16 33 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 34 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 36 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 37 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 38 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.09 -0.02 7.64 -51.93 -0.40 -0.42 16 40 H 0.07 -0.03 7.45 -51.93 -0.39 -0.42 16 41 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.38 -1.12 9.05 45.56 0.41 -0.71 16 43 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.07 -0.09 6.51 -51.93 -0.34 -0.43 16 46 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 47 H 0.14 -0.35 7.61 -52.49 -0.40 -0.75 16 48 H 0.14 -0.46 4.85 -52.49 -0.25 -0.72 16 LS Contribution 372.62 15.07 5.62 5.62 Total: 0.00 -9.76 372.62 -13.06 -22.82 By element: Atomic # 1 Polarization: -7.10 SS G_CDS: -6.24 Total: -13.34 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -3.87 Total: -2.09 kcal Atomic # 7 Polarization: 1.75 SS G_CDS: -0.02 Total: 1.73 kcal Atomic # 8 Polarization: -7.35 SS G_CDS: -2.84 Total: -10.20 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.08 Total: -6.61 kcal Atomic # 16 Polarization: 2.68 SS G_CDS: -0.61 Total: 2.08 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -9.76 -13.06 -22.82 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_17849790_13421422.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.130 kcal (2) G-P(sol) polarization free energy of solvation -9.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.816 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.11 seconds