Wall clock time and date at job start Fri Mar 5 2021 22:59:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53000 * 109.47203 * 2 1 4 4 C 1.52997 * 109.47184 * 240.00014 * 2 1 3 5 5 O 1.45205 * 109.46914 * 119.99982 * 2 1 3 6 6 C 1.34632 * 117.00023 * 59.99718 * 5 2 1 7 7 O 1.21515 * 120.00105 * 0.02562 * 6 5 2 8 8 N 1.34777 * 120.00296 * 179.97438 * 6 5 2 9 9 C 1.46501 * 120.00508 * 180.02562 * 8 6 5 10 10 H 1.09002 * 112.89987 * 336.25430 * 9 8 6 11 11 C 1.53774 * 113.61528 * 107.50268 * 9 8 6 12 12 C 1.53778 * 87.07917 * 139.98263 * 11 9 8 13 13 H 1.08998 * 113.68699 * 89.13184 * 12 11 9 14 14 S 1.81410 * 113.61392 * 220.01741 * 12 11 9 15 15 O 1.42098 * 110.53906 * 170.87507 * 14 12 11 16 16 O 1.42099 * 110.53827 * 34.12592 * 14 12 11 17 17 O 1.52195 * 104.44709 * 282.49961 * 14 12 11 18 18 C 1.35923 * 114.00097 * 75.00417 * 17 14 12 19 19 C 1.38815 * 120.06050 * 89.99308 * 18 17 14 20 20 Cl 1.73599 * 120.04123 * 359.97438 * 19 18 17 21 21 C 1.38263 * 119.92349 * 179.71817 * 19 18 17 22 22 C 1.38255 * 120.03844 * 0.30350 * 21 19 18 23 23 C 1.50701 * 119.93623 * 179.97438 * 22 21 19 24 24 O 1.42901 * 109.46985 * 65.00185 * 23 22 21 25 25 Si 1.86302 * 109.46925 * 185.00138 * 23 22 21 26 26 C 1.38279 * 120.12068 * 359.97438 * 22 21 19 27 27 C 1.38145 * 120.07699 * 0.02562 * 26 22 21 28 28 C 1.53775 * 87.08256 * 334.56572 * 12 11 9 29 29 H 1.08995 * 109.47008 * 299.99901 * 1 2 3 30 30 H 1.09001 * 109.46537 * 60.00371 * 1 2 3 31 31 H 1.09002 * 109.47113 * 179.97438 * 1 2 3 32 32 H 1.08997 * 109.47259 * 179.97438 * 3 2 1 33 33 H 1.08994 * 109.47421 * 300.00112 * 3 2 1 34 34 H 1.09007 * 109.47062 * 59.99685 * 3 2 1 35 35 H 1.09002 * 109.46921 * 299.99641 * 4 2 1 36 36 H 1.08991 * 109.47291 * 59.99985 * 4 2 1 37 37 H 1.08998 * 109.47160 * 180.02562 * 4 2 1 38 38 H 0.97005 * 119.99864 * 0.02562 * 8 6 5 39 39 H 1.09006 * 113.61361 * 25.43602 * 11 9 8 40 40 H 1.08993 * 113.61716 * 254.53452 * 11 9 8 41 41 H 1.07993 * 119.98029 * 180.27469 * 21 19 18 42 42 H 1.09002 * 109.47428 * 305.00183 * 23 22 21 43 43 H 0.96699 * 114.00139 * 60.00036 * 24 23 22 44 44 H 1.48496 * 109.99956 * 58.68173 * 25 23 22 45 45 H 1.48497 * 110.00057 * 180.02562 * 25 23 22 46 46 H 1.07998 * 119.96095 * 180.02562 * 26 22 21 47 47 H 1.08002 * 120.02421 * 180.02562 * 27 26 22 48 48 H 1.09003 * 113.60950 * 139.97532 * 28 12 11 49 49 H 1.08995 * 113.61585 * 270.79872 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5036 8 7 2.0679 -2.6657 2.4167 9 6 1.6747 -4.0672 2.5827 10 1 0.7609 -4.3180 2.0441 11 6 2.8231 -5.0616 2.3442 12 6 2.2750 -5.8600 3.5386 13 1 1.5253 -6.6016 3.2627 14 16 3.5685 -6.5337 4.6175 15 8 2.9987 -7.0737 5.8019 16 8 4.6794 -5.6495 4.6760 17 8 4.0947 -7.7485 3.8665 18 6 4.8927 -7.4421 2.8097 19 6 6.2633 -7.3128 2.9878 20 17 6.9606 -7.5414 4.5611 21 6 7.0731 -7.0069 1.9097 22 6 6.5177 -6.8239 0.6569 23 6 7.4024 -6.4899 -0.5165 24 8 8.2761 -7.5890 -0.7822 25 14 6.3469 -6.1590 -2.0156 26 6 5.1519 -6.9467 0.4786 27 6 4.3383 -7.2522 1.5524 28 6 1.6759 -4.5380 4.0467 29 1 -0.3633 0.5138 0.8900 30 1 -0.3632 0.5138 -0.8901 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1301 1.4425 0.0005 33 1 1.6768 1.9564 -0.8899 34 1 1.6767 1.9564 0.8900 35 1 1.6768 -1.7489 -1.2492 36 1 1.6768 -0.2075 -2.1391 37 1 3.1301 -0.7216 -1.2490 38 1 2.6276 -2.2369 3.0830 39 1 3.8117 -4.6372 2.5194 40 1 2.7513 -5.5919 1.3946 41 1 8.1400 -6.9104 2.0464 42 1 7.9934 -5.6036 -0.2854 43 1 7.8177 -8.4132 -0.9960 44 1 5.4117 -5.0387 -1.7411 45 1 7.2076 -5.8291 -3.1799 46 1 4.7209 -6.8036 -0.5012 47 1 3.2717 -7.3483 1.4122 48 1 0.6779 -4.6457 4.4715 49 1 2.3503 -3.9712 4.6885 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_2163008_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 22:59:49 Heat of formation + Delta-G solvation = -148.952050 kcal Electronic energy + Delta-G solvation = -38162.185067 eV Core-core repulsion = 33018.855898 eV Total energy + Delta-G solvation = -5143.329169 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.098 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.51350 -41.91809 -40.51261 -40.10052 -38.37466 -37.94286 -37.90427 -37.42322 -37.21644 -35.39792 -34.24816 -32.53592 -32.35272 -28.38971 -28.35744 -27.55038 -27.25616 -27.21549 -24.58742 -23.82411 -23.53781 -22.00216 -21.58620 -20.93676 -19.85345 -19.26015 -19.04114 -18.92225 -18.57685 -17.84299 -17.40085 -17.21411 -17.13870 -16.89999 -16.41742 -16.31917 -16.10009 -15.70769 -15.55888 -15.38455 -15.26559 -14.92583 -14.60504 -14.53109 -14.46736 -14.38034 -14.13344 -14.00194 -13.69812 -13.56625 -13.42350 -13.32644 -13.20562 -13.19017 -13.05837 -12.91220 -12.89365 -12.89036 -12.71547 -12.56460 -12.43290 -12.31612 -12.27056 -12.18670 -11.96262 -11.54417 -11.37439 -11.06714 -10.74749 -10.47714 -10.24221 -10.09339 -5.24390 -1.27334 -0.41790 -0.31734 0.70984 0.88848 1.07684 1.08263 1.43884 1.73622 1.80473 1.92375 2.24651 2.52206 2.72466 3.02313 3.04755 3.11706 3.16440 3.20645 3.25921 3.38439 3.45937 3.64126 3.70787 3.76665 3.77606 3.90527 3.97043 4.06635 4.13477 4.19841 4.25438 4.33424 4.38767 4.42991 4.49516 4.52264 4.52503 4.56915 4.68955 4.72128 4.72705 4.83326 4.84278 4.86270 5.02076 5.12627 5.19888 5.29131 5.36419 5.50679 6.27493 6.33563 7.29908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.143 4.143 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.652 3.348 7 O -0.565 6.565 8 N -0.704 5.704 9 C 0.159 3.841 10 H 0.133 0.867 11 C -0.137 4.137 12 C -0.648 4.648 13 H 0.166 0.834 14 S 2.594 3.406 15 O -0.916 6.916 16 O -0.934 6.934 17 O -0.653 6.653 18 C 0.077 3.923 19 C -0.010 4.010 20 Cl -0.028 7.028 21 C -0.070 4.070 22 C -0.088 4.088 23 C -0.071 4.071 24 O -0.534 6.534 25 Si 0.686 3.314 26 C -0.099 4.099 27 C -0.106 4.106 28 C -0.114 4.114 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.082 0.918 34 H 0.068 0.932 35 H 0.087 0.913 36 H 0.072 0.928 37 H 0.059 0.941 38 H 0.410 0.590 39 H 0.110 0.890 40 H 0.101 0.899 41 H 0.153 0.847 42 H 0.123 0.877 43 H 0.382 0.618 44 H -0.251 1.251 45 H -0.249 1.249 46 H 0.149 0.851 47 H 0.157 0.843 48 H 0.105 0.895 49 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.843 0.731 -5.386 5.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.200 4.200 4 C -0.242 4.242 5 O -0.278 6.278 6 C 0.406 3.594 7 O -0.454 6.454 8 N -0.363 5.363 9 C 0.054 3.946 10 H 0.150 0.850 11 C -0.176 4.176 12 C -0.755 4.755 13 H 0.184 0.816 14 S 2.688 3.312 15 O -0.914 6.914 16 O -0.932 6.932 17 O -0.612 6.612 18 C 0.035 3.965 19 C -0.039 4.039 20 Cl 0.001 6.999 21 C -0.089 4.089 22 C -0.089 4.089 23 C -0.182 4.182 24 O -0.339 6.339 25 Si 0.587 3.413 26 C -0.117 4.117 27 C -0.126 4.126 28 C -0.153 4.153 29 H 0.079 0.921 30 H 0.091 0.909 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.087 0.913 35 H 0.106 0.894 36 H 0.091 0.909 37 H 0.078 0.922 38 H 0.246 0.754 39 H 0.128 0.872 40 H 0.120 0.880 41 H 0.171 0.829 42 H 0.140 0.860 43 H 0.230 0.770 44 H -0.176 1.176 45 H -0.173 1.173 46 H 0.166 0.834 47 H 0.175 0.825 48 H 0.124 0.876 49 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -1.566 1.285 -5.570 5.927 hybrid contribution -0.052 0.372 0.818 0.900 sum -1.619 1.658 -4.752 5.287 Atomic orbital electron populations 1.22527 0.93759 1.05049 1.02812 1.22138 0.94488 0.91587 0.81759 1.21886 1.02367 0.92311 1.03413 1.22525 1.01593 1.03434 0.96611 1.86322 1.71371 1.23315 1.46784 1.18137 0.78476 0.80644 0.82124 1.90916 1.40918 1.70553 1.42994 1.44753 1.55502 1.11932 1.24110 1.22410 0.98805 0.77597 0.95791 0.84976 1.23651 1.00823 0.96493 0.96623 1.32141 1.19808 1.08895 1.14655 0.81626 1.05720 0.76220 0.73752 0.75460 1.93671 1.79857 1.75955 1.41933 1.93695 1.46761 1.66998 1.85769 1.85759 1.67040 1.59007 1.49368 1.17699 0.87360 1.06392 0.85087 1.21167 0.91515 1.01635 0.89580 1.98444 1.83568 1.94617 1.23245 1.20963 1.00987 0.97301 0.89617 1.20585 0.94260 0.98439 0.95636 1.25169 0.98039 0.93413 1.01582 1.86560 1.34564 1.20967 1.91836 0.94859 0.80925 0.88097 0.77467 1.20984 0.92578 0.99367 0.98783 1.21348 1.02027 0.99262 0.90000 1.23074 1.03869 0.90828 0.97546 0.92053 0.90876 0.89423 0.91379 0.89879 0.91327 0.89422 0.90860 0.92164 0.75426 0.87187 0.88032 0.82892 0.86014 0.77040 1.17586 1.17344 0.83385 0.82509 0.87633 0.87965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.11 8.37 37.16 0.31 0.20 16 2 C 0.14 0.09 1.13 -90.62 -0.10 -0.01 16 3 C -0.14 0.16 8.85 37.16 0.33 0.49 16 4 C -0.18 -0.10 8.37 37.16 0.31 0.21 16 5 O -0.36 -0.60 9.94 -40.30 -0.40 -1.00 16 6 C 0.65 1.05 8.06 54.06 0.44 1.48 16 7 O -0.56 -1.96 11.48 -19.28 -0.22 -2.18 16 8 N -0.70 0.85 5.36 -57.94 -0.31 0.54 16 9 C 0.16 -0.40 4.24 -67.12 -0.28 -0.68 16 10 H 0.13 -0.28 7.47 -51.93 -0.39 -0.67 16 11 C -0.14 0.44 5.10 -25.92 -0.13 0.31 16 12 C -0.65 2.01 3.96 -25.92 -0.10 1.91 16 13 H 0.17 -0.94 8.14 -51.93 -0.42 -1.36 16 14 S 2.59 3.04 5.13 -107.50 -0.55 2.49 16 15 O -0.92 -4.55 18.09 -67.04 -1.21 -5.76 16 16 O -0.93 -2.48 14.49 -67.04 -0.97 -3.45 16 17 O -0.65 -0.82 9.52 -51.82 -0.49 -1.31 16 18 C 0.08 0.01 4.64 -39.19 -0.18 -0.17 16 19 C -0.01 -0.01 5.66 -39.36 -0.22 -0.23 16 20 Cl -0.03 -0.09 27.26 -51.86 -1.41 -1.50 16 21 C -0.07 0.05 9.46 -39.57 -0.37 -0.32 16 22 C -0.09 0.21 5.35 -104.60 -0.56 -0.35 16 23 C -0.07 0.20 2.80 36.01 0.10 0.30 16 24 O -0.53 1.13 12.83 -35.23 -0.45 0.67 16 25 Si 0.69 -2.32 29.80 -169.99 -5.07 -7.38 16 26 C -0.10 0.37 8.66 -39.60 -0.34 0.03 16 27 C -0.11 0.32 6.69 -39.44 -0.26 0.06 16 28 C -0.11 0.38 7.42 -25.92 -0.19 0.19 16 29 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.09 0.21 5.88 -51.93 -0.31 -0.09 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.09 0.20 5.88 -51.93 -0.31 -0.10 16 36 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 37 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 38 H 0.41 -1.17 8.84 -40.82 -0.36 -1.53 16 39 H 0.11 -0.30 7.53 -51.93 -0.39 -0.69 16 40 H 0.10 -0.49 5.93 -51.93 -0.31 -0.80 16 41 H 0.15 -0.21 8.06 -52.49 -0.42 -0.63 16 42 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 43 H 0.38 -2.30 8.70 45.56 0.40 -1.91 16 44 H -0.25 0.30 7.11 56.52 0.40 0.70 16 45 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 46 H 0.15 -0.93 4.90 -52.49 -0.26 -1.18 16 47 H 0.16 -0.95 6.52 -52.49 -0.34 -1.29 16 48 H 0.11 -0.47 8.14 -51.93 -0.42 -0.89 16 49 H 0.10 -0.41 8.08 -51.93 -0.42 -0.83 16 LS Contribution 415.90 15.07 6.27 6.27 Total: 0.00 -11.62 415.90 -12.62 -24.23 By element: Atomic # 1 Polarization: -8.50 SS G_CDS: -6.52 Total: -15.02 kcal Atomic # 6 Polarization: 4.67 SS G_CDS: -1.27 Total: 3.40 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.31 Total: 0.54 kcal Atomic # 8 Polarization: -9.28 SS G_CDS: -3.75 Total: -13.03 kcal Atomic # 14 Polarization: -2.32 SS G_CDS: -5.07 Total: -7.38 kcal Atomic # 16 Polarization: 3.04 SS G_CDS: -0.55 Total: 2.49 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.41 Total: -1.50 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -11.62 -12.62 -24.23 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_2163008_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.717 kcal (2) G-P(sol) polarization free energy of solvation -11.618 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.336 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.235 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.952 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds