Wall clock time and date at job start Fri Mar 5 2021 23:03:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53006 * 109.47009 * 2 1 4 4 C 1.52996 * 109.47454 * 239.99977 * 2 1 3 5 5 O 1.45199 * 109.47393 * 119.99687 * 2 1 3 6 6 C 1.34637 * 116.99885 * 60.00208 * 5 2 1 7 7 O 1.21514 * 120.00224 * 359.97438 * 6 5 2 8 8 N 1.34771 * 120.00006 * 180.02562 * 6 5 2 9 9 C 1.46500 * 120.00039 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.85078 * 23.80723 * 9 8 6 11 11 C 1.53784 * 113.61504 * 154.99904 * 9 8 6 12 12 C 1.53778 * 87.08530 * 89.19967 * 11 9 8 13 13 H 1.09004 * 113.61251 * 270.80416 * 12 11 9 14 14 S 1.81392 * 113.61579 * 139.97936 * 12 11 9 15 15 O 1.42103 * 110.54423 * 74.04820 * 14 12 11 16 16 O 1.42101 * 110.54341 * 297.29867 * 14 12 11 17 17 O 1.52201 * 104.45172 * 185.67434 * 14 12 11 18 18 C 1.35925 * 113.99934 * 284.64160 * 17 14 12 19 19 C 1.38809 * 120.05667 * 265.72164 * 18 17 14 20 20 Cl 1.73599 * 120.04118 * 359.95546 * 19 18 17 21 21 C 1.38260 * 119.92059 * 179.74703 * 19 18 17 22 22 C 1.38246 * 120.04084 * 0.48322 * 21 19 18 23 23 C 1.50706 * 119.93653 * 179.76668 * 22 21 19 24 24 O 1.42903 * 109.46583 * 119.72814 * 23 22 21 25 25 Si 1.86293 * 109.47480 * 359.72845 * 23 22 21 26 26 C 1.38270 * 120.12153 * 359.49725 * 22 21 19 27 27 C 1.38156 * 120.07544 * 0.26733 * 26 22 21 28 28 C 1.53786 * 87.16919 * 25.38934 * 12 11 9 29 29 H 1.08998 * 109.47283 * 300.00100 * 1 2 3 30 30 H 1.09000 * 109.47133 * 60.00477 * 1 2 3 31 31 H 1.09006 * 109.46898 * 180.02562 * 1 2 3 32 32 H 1.08997 * 109.46824 * 180.02562 * 3 2 1 33 33 H 1.09000 * 109.46783 * 299.99737 * 3 2 1 34 34 H 1.08998 * 109.47180 * 59.99837 * 3 2 1 35 35 H 1.09006 * 109.47068 * 299.99896 * 4 2 1 36 36 H 1.09000 * 109.47322 * 59.99661 * 4 2 1 37 37 H 1.08997 * 109.47837 * 179.97438 * 4 2 1 38 38 H 0.97004 * 120.00377 * 359.97438 * 8 6 5 39 39 H 1.09004 * 113.61324 * 334.65149 * 11 9 8 40 40 H 1.09005 * 113.68898 * 203.76684 * 11 9 8 41 41 H 1.08003 * 119.97967 * 180.22865 * 21 19 18 42 42 H 1.09004 * 109.47073 * 239.72172 * 23 22 21 43 43 H 0.96699 * 114.00145 * 299.99308 * 24 23 22 44 44 H 1.48494 * 110.00037 * 180.02562 * 25 23 22 45 45 H 1.48502 * 109.99905 * 301.31565 * 25 23 22 46 46 H 1.07998 * 119.96423 * 180.25626 * 26 22 21 47 47 H 1.07996 * 120.02291 * 179.97438 * 27 26 22 48 48 H 1.09003 * 113.61245 * 89.15724 * 28 12 11 49 49 H 1.08994 * 113.61597 * 220.05943 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0141 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9510 -2.5095 0.5041 8 7 2.0673 -2.6653 2.4172 9 6 1.6733 -4.0664 2.5838 10 1 1.4211 -4.5502 1.6402 11 6 2.6462 -4.8808 3.4527 12 6 1.8042 -4.4467 4.6640 13 1 2.1332 -3.5085 5.1108 14 16 1.5599 -5.7627 5.8883 15 8 2.7538 -5.9851 6.6263 16 8 0.8382 -6.8461 5.3187 17 8 0.5974 -5.1631 6.9035 18 6 1.1705 -4.2601 7.7424 19 6 1.6470 -4.6668 8.9811 20 17 1.5107 -6.3295 9.4615 21 6 2.2342 -3.7470 9.8301 22 6 2.3376 -2.4219 9.4499 23 6 2.9733 -1.4203 10.3794 24 8 4.1145 -0.8394 9.7450 25 14 3.5029 -2.2764 11.9469 26 6 1.8639 -2.0149 8.2163 27 6 1.2807 -2.9308 7.3621 28 6 0.6251 -4.2850 3.6900 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.1299 1.4425 -0.0005 33 1 1.6766 1.9563 -0.8900 34 1 1.6766 1.9564 0.8900 35 1 1.6767 -1.7490 -1.2492 36 1 1.6767 -0.2075 -2.1392 37 1 3.1300 -0.7209 -1.2495 38 1 2.6270 -2.2364 3.0834 39 1 3.6612 -4.4834 3.4616 40 1 2.6133 -5.9532 3.2596 41 1 2.6086 -4.0632 10.7926 42 1 2.2529 -0.6379 10.6182 43 1 4.7985 -1.4789 9.5037 44 1 4.1308 -1.2992 12.8721 45 1 2.3301 -2.9118 12.5996 46 1 1.9498 -0.9799 7.9202 47 1 0.9106 -2.6119 6.3989 48 1 0.0374 -5.1939 3.5611 49 1 0.0107 -3.4072 3.8901 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_2163008_17701012.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:03:37 Heat of formation + Delta-G solvation = -150.456947 kcal Electronic energy + Delta-G solvation = -37411.864397 eV Core-core repulsion = 32268.469971 eV Total energy + Delta-G solvation = -5143.394426 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.098 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.48162 -41.98205 -40.54324 -40.13477 -38.37435 -38.00488 -37.86699 -37.42473 -37.21494 -35.36117 -34.09046 -32.77749 -32.14931 -28.39226 -28.35073 -27.54054 -27.36614 -27.18101 -24.69869 -23.96193 -23.64614 -21.96954 -21.31952 -21.00075 -19.75293 -19.49524 -19.06427 -18.77550 -18.56099 -17.75330 -17.51755 -17.18995 -16.97720 -16.92243 -16.51785 -16.35417 -15.96858 -15.74627 -15.59470 -15.46434 -15.35108 -14.93293 -14.73793 -14.59138 -14.44126 -14.30031 -14.19610 -14.08477 -13.87623 -13.71645 -13.47177 -13.34522 -13.21040 -13.18714 -12.96363 -12.93220 -12.89678 -12.73484 -12.59191 -12.56282 -12.40436 -12.28694 -12.20261 -12.08085 -12.07541 -11.49009 -11.37749 -11.07798 -10.80112 -10.45947 -10.41178 -10.08362 -5.21103 -1.27163 -0.43577 -0.36830 0.67702 0.88147 1.00154 1.03476 1.44759 1.72842 1.79540 1.89502 2.34968 2.52875 2.70225 2.89228 2.97216 3.07406 3.11960 3.26233 3.28814 3.38745 3.51647 3.66695 3.70545 3.73155 3.76458 3.90367 4.06422 4.11406 4.14613 4.19038 4.25248 4.32892 4.34720 4.46517 4.49337 4.50721 4.52901 4.57286 4.67460 4.70310 4.72443 4.83263 4.84393 4.86867 5.02249 5.13581 5.16360 5.30364 5.37117 5.49193 6.24334 6.30095 7.28427 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.185 4.185 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.560 6.560 8 N -0.696 5.696 9 C 0.154 3.846 10 H 0.123 0.877 11 C -0.111 4.111 12 C -0.657 4.657 13 H 0.155 0.845 14 S 2.592 3.408 15 O -0.936 6.936 16 O -0.912 6.912 17 O -0.655 6.655 18 C 0.084 3.916 19 C -0.008 4.008 20 Cl -0.028 7.028 21 C -0.093 4.093 22 C -0.091 4.091 23 C -0.068 4.068 24 O -0.534 6.534 25 Si 0.683 3.317 26 C -0.069 4.069 27 C -0.123 4.123 28 C -0.123 4.123 29 H 0.060 0.940 30 H 0.073 0.927 31 H 0.087 0.913 32 H 0.068 0.932 33 H 0.083 0.917 34 H 0.067 0.933 35 H 0.087 0.913 36 H 0.073 0.927 37 H 0.060 0.940 38 H 0.407 0.593 39 H 0.102 0.898 40 H 0.114 0.886 41 H 0.152 0.848 42 H 0.124 0.876 43 H 0.383 0.617 44 H -0.247 1.247 45 H -0.252 1.252 46 H 0.152 0.848 47 H 0.152 0.848 48 H 0.118 0.882 49 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.318 4.966 0.169 5.975 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.278 6.278 6 C 0.407 3.593 7 O -0.448 6.448 8 N -0.355 5.355 9 C 0.048 3.952 10 H 0.141 0.859 11 C -0.150 4.150 12 C -0.764 4.764 13 H 0.173 0.827 14 S 2.687 3.313 15 O -0.934 6.934 16 O -0.910 6.910 17 O -0.613 6.613 18 C 0.041 3.959 19 C -0.037 4.037 20 Cl 0.002 6.998 21 C -0.111 4.111 22 C -0.092 4.092 23 C -0.179 4.179 24 O -0.340 6.340 25 Si 0.583 3.417 26 C -0.087 4.087 27 C -0.143 4.143 28 C -0.163 4.163 29 H 0.079 0.921 30 H 0.092 0.908 31 H 0.106 0.894 32 H 0.087 0.913 33 H 0.101 0.899 34 H 0.086 0.914 35 H 0.106 0.894 36 H 0.092 0.908 37 H 0.079 0.921 38 H 0.242 0.758 39 H 0.121 0.879 40 H 0.132 0.868 41 H 0.169 0.831 42 H 0.142 0.858 43 H 0.231 0.769 44 H -0.171 1.171 45 H -0.176 1.176 46 H 0.169 0.831 47 H 0.170 0.830 48 H 0.137 0.863 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 2.348 4.428 1.016 5.114 hybrid contribution -0.343 0.781 -0.390 0.938 sum 2.005 5.209 0.627 5.617 Atomic orbital electron populations 1.22530 0.93766 1.05095 1.02799 1.22152 0.94481 0.91561 0.81741 1.21885 1.02380 0.92266 1.03397 1.22530 1.01667 1.03460 0.96541 1.86306 1.71458 1.23178 1.46893 1.18041 0.78634 0.80749 0.81859 1.90941 1.40520 1.70327 1.43041 1.44289 1.55644 1.11604 1.23947 1.21634 0.94089 0.79858 0.99664 0.85919 1.23025 0.99478 1.02166 0.90378 1.32417 1.08747 1.20649 1.14562 0.82698 1.05745 0.73963 0.76181 0.75419 1.93683 1.49219 1.84274 1.66274 1.93675 1.71251 1.47790 1.78328 1.85759 1.59554 1.61642 1.54362 1.17723 1.00627 0.87558 0.89967 1.20975 1.00339 0.88461 0.93924 1.98444 1.96182 1.14206 1.90981 1.20965 0.98823 0.91632 0.99706 1.20581 0.98461 0.93791 0.96374 1.25093 0.90414 0.99378 1.03036 1.86536 1.28907 1.37404 1.81157 0.94676 0.86481 0.84201 0.76294 1.21026 0.94995 1.00431 0.92244 1.21442 1.00287 0.90160 1.02384 1.23298 0.94508 1.05457 0.93024 0.92121 0.90823 0.89384 0.91342 0.89850 0.91387 0.89392 0.90834 0.92050 0.75759 0.87935 0.86794 0.83067 0.85834 0.76926 1.17125 1.17631 0.83075 0.83004 0.86341 0.88689 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.08 8.37 37.16 0.31 0.23 16 2 C 0.14 0.05 1.13 -90.62 -0.10 -0.06 16 3 C -0.14 0.22 8.85 37.16 0.33 0.55 16 4 C -0.18 -0.09 8.37 37.16 0.31 0.22 16 5 O -0.36 -0.39 9.94 -40.32 -0.40 -0.79 16 6 C 0.65 0.86 8.06 54.05 0.44 1.29 16 7 O -0.56 -2.11 11.48 -19.28 -0.22 -2.33 16 8 N -0.70 1.27 5.27 -57.84 -0.30 0.97 16 9 C 0.15 -0.34 4.33 -67.03 -0.29 -0.62 16 10 H 0.12 -0.15 7.46 -51.93 -0.39 -0.54 16 11 C -0.11 0.39 7.42 -25.92 -0.19 0.19 16 12 C -0.66 1.98 3.64 -25.92 -0.09 1.88 16 13 H 0.16 -0.86 6.09 -51.93 -0.32 -1.18 16 14 S 2.59 2.96 5.09 -107.50 -0.55 2.41 16 15 O -0.94 -2.73 15.84 -67.04 -1.06 -3.79 16 16 O -0.91 -3.91 17.43 -67.04 -1.17 -5.08 16 17 O -0.65 -0.95 9.52 -51.83 -0.49 -1.45 16 18 C 0.08 0.04 4.72 -39.20 -0.19 -0.15 16 19 C -0.01 -0.01 5.75 -39.36 -0.23 -0.23 16 20 Cl -0.03 -0.07 27.85 -51.86 -1.44 -1.52 16 21 C -0.09 0.12 8.45 -39.57 -0.33 -0.22 16 22 C -0.09 0.23 5.39 -104.60 -0.56 -0.34 16 23 C -0.07 0.21 2.82 36.01 0.10 0.31 16 24 O -0.53 1.50 12.77 -35.23 -0.45 1.05 16 25 Si 0.68 -1.93 29.78 -169.99 -5.06 -6.99 16 26 C -0.07 0.22 9.60 -39.60 -0.38 -0.16 16 27 C -0.12 0.32 8.50 -39.44 -0.34 -0.02 16 28 C -0.12 0.31 7.46 -25.83 -0.19 0.12 16 29 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 0.22 5.88 -51.93 -0.31 -0.09 16 32 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.09 0.22 5.88 -51.93 -0.31 -0.09 16 36 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 37 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.41 -1.67 8.81 -40.82 -0.36 -2.03 16 39 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 40 H 0.11 -0.46 8.10 -51.93 -0.42 -0.88 16 41 H 0.15 -0.44 4.87 -52.48 -0.26 -0.69 16 42 H 0.12 -0.39 7.96 -51.93 -0.41 -0.80 16 43 H 0.38 -2.46 8.70 45.56 0.40 -2.06 16 44 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 45 H -0.25 0.13 7.11 56.52 0.40 0.53 16 46 H 0.15 -0.74 8.06 -52.49 -0.42 -1.16 16 47 H 0.15 -0.82 6.90 -52.49 -0.36 -1.18 16 48 H 0.12 -0.27 7.55 -51.93 -0.39 -0.66 16 49 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 LS Contribution 421.58 15.07 6.35 6.35 Total: 0.00 -11.09 421.58 -12.76 -23.84 By element: Atomic # 1 Polarization: -9.14 SS G_CDS: -6.55 Total: -15.68 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: -1.41 Total: 3.00 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: -0.30 Total: 0.97 kcal Atomic # 8 Polarization: -8.59 SS G_CDS: -3.80 Total: -12.38 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: -5.06 Total: -6.99 kcal Atomic # 16 Polarization: 2.96 SS G_CDS: -0.55 Total: 2.41 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.44 Total: -1.52 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -11.09 -12.76 -23.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_2163008_17701012.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.613 kcal (2) G-P(sol) polarization free energy of solvation -11.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.701 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.844 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds