Wall clock time and date at job start Fri Mar 5 2021 23:56:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53006 * 109.47212 * 2 1 4 4 C 1.53008 * 109.47098 * 240.00422 * 2 1 3 5 5 O 1.45198 * 109.47365 * 120.00008 * 2 1 3 6 6 C 1.34643 * 116.99832 * 59.99875 * 5 2 1 7 7 O 1.21517 * 119.99554 * 0.02562 * 6 5 2 8 8 N 1.34771 * 120.00230 * 179.97438 * 6 5 2 9 9 C 1.46498 * 120.00097 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.84755 * 23.80940 * 9 8 6 11 11 C 1.53784 * 113.61228 * 155.00244 * 9 8 6 12 12 C 1.53778 * 87.08176 * 140.06745 * 11 9 8 13 13 H 1.08998 * 113.61372 * 89.20074 * 12 11 9 14 14 S 1.81397 * 113.61750 * 220.02071 * 12 11 9 15 15 O 1.42103 * 110.54415 * 66.84194 * 14 12 11 16 16 O 1.42101 * 110.54379 * 290.09592 * 14 12 11 17 17 O 1.52192 * 104.45236 * 178.46917 * 14 12 11 18 18 C 1.36015 * 113.99976 * 75.00049 * 17 14 12 19 19 C 1.38837 * 120.06604 * 270.27623 * 18 17 14 20 20 F 1.35097 * 120.03645 * 359.97438 * 19 18 17 21 21 C 1.38373 * 119.92880 * 180.23546 * 19 18 17 22 22 C 1.38255 * 120.06679 * 359.48544 * 21 19 18 23 23 C 1.50702 * 119.92771 * 180.23604 * 22 21 19 24 24 O 1.42904 * 109.47477 * 300.00020 * 23 22 21 25 25 Si 1.86308 * 109.46892 * 180.02562 * 23 22 21 26 26 C 1.38249 * 120.14250 * 0.26054 * 22 21 19 27 27 C 1.38374 * 120.06670 * 359.97438 * 26 22 21 28 28 F 1.35098 * 120.03389 * 180.02562 * 27 26 22 29 29 C 1.53782 * 87.17051 * 334.60993 * 12 11 9 30 30 H 1.09005 * 109.47249 * 300.00151 * 1 2 3 31 31 H 1.09003 * 109.47180 * 59.99548 * 1 2 3 32 32 H 1.08998 * 109.47411 * 180.02562 * 1 2 3 33 33 H 1.08999 * 109.47388 * 180.02562 * 3 2 1 34 34 H 1.08996 * 109.47047 * 300.00158 * 3 2 1 35 35 H 1.09002 * 109.46706 * 60.00042 * 3 2 1 36 36 H 1.08998 * 109.46604 * 300.00022 * 4 2 1 37 37 H 1.09003 * 109.47081 * 59.99969 * 4 2 1 38 38 H 1.08994 * 109.46616 * 179.97438 * 4 2 1 39 39 H 0.97010 * 119.99664 * 0.02562 * 8 6 5 40 40 H 1.08998 * 113.61438 * 25.52106 * 11 9 8 41 41 H 1.08994 * 113.69337 * 254.62771 * 11 9 8 42 42 H 1.08002 * 119.96923 * 179.77183 * 21 19 18 43 43 H 1.09000 * 109.47353 * 60.00637 * 23 22 21 44 44 H 0.96699 * 114.00166 * 180.02562 * 24 23 22 45 45 H 1.48493 * 110.00285 * 298.68270 * 25 23 22 46 46 H 1.48500 * 109.99823 * 60.00177 * 25 23 22 47 47 H 1.07995 * 119.96948 * 180.02562 * 26 22 21 48 48 H 1.09005 * 113.61438 * 139.93620 * 29 12 11 49 49 H 1.08996 * 113.61599 * 270.83620 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2494 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9515 -2.5097 0.5034 8 7 2.0680 -2.6658 2.4165 9 6 1.6739 -4.0669 2.5830 10 1 1.4208 -4.5503 1.6394 11 6 2.6474 -4.8817 3.4509 12 6 1.4102 -5.5559 4.0670 13 1 1.0859 -6.4473 3.5300 14 16 1.5425 -5.8209 5.8566 15 8 1.5556 -4.5779 6.5452 16 8 2.5050 -6.8265 6.1421 17 8 0.2135 -6.4519 6.2464 18 6 0.0945 -7.7580 5.8861 19 6 -0.4290 -8.0921 4.6444 20 9 -0.8215 -7.1201 3.7922 21 6 -0.5534 -9.4220 4.2827 22 6 -0.1471 -10.4172 5.1522 23 6 -0.2790 -11.8643 4.7529 24 8 -1.6529 -12.1654 4.4999 25 14 0.3500 -12.9486 6.1313 26 6 0.3795 -10.0876 6.3873 27 6 0.5019 -8.7597 6.7568 28 9 1.0170 -8.4384 7.9636 29 6 0.6254 -4.2888 3.6882 30 1 -0.3634 0.5139 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 3.1300 1.4426 -0.0005 34 1 1.6766 1.9564 -0.8899 35 1 1.6766 1.9563 0.8900 36 1 1.6766 -1.7488 -1.2493 37 1 1.6766 -0.2073 -2.1393 38 1 3.1299 -0.7208 -1.2495 39 1 2.6277 -2.2369 3.0828 40 1 3.2126 -4.2759 4.1592 41 1 3.2775 -5.5636 2.8800 42 1 -0.9639 -9.6827 3.3184 43 1 0.3051 -12.0472 3.8510 44 1 -1.8128 -13.0823 4.2377 45 1 1.7862 -12.6678 6.3832 46 1 -0.4387 -12.7087 7.3664 47 1 0.6963 -10.8672 7.0641 48 1 -0.3754 -4.4926 3.3073 49 1 0.6368 -3.5207 4.4614 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_6672276_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:56:56 Heat of formation + Delta-G solvation = -227.034019 kcal Electronic energy + Delta-G solvation = -40462.781583 eV Core-core repulsion = 34736.958367 eV Total energy + Delta-G solvation = -5725.823216 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.118 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -50.71059 -50.43208 -42.19857 -41.85124 -40.40327 -40.21842 -38.45092 -37.83814 -37.70306 -37.33078 -35.33035 -34.16951 -32.72085 -32.07761 -28.32914 -28.29334 -27.61198 -27.38425 -27.19854 -24.90863 -23.91216 -23.54425 -22.24569 -21.59025 -20.92673 -19.91949 -19.67331 -19.32153 -19.12486 -18.98846 -18.74494 -18.43002 -17.61983 -17.43407 -17.25765 -17.13246 -17.00272 -16.91723 -16.55945 -16.35214 -16.05835 -15.87885 -15.69446 -15.52286 -15.35128 -15.15277 -14.64451 -14.43494 -14.35438 -14.33299 -14.07753 -14.02779 -13.85574 -13.53235 -13.44529 -13.40638 -13.35522 -13.23111 -13.13412 -13.04395 -12.94238 -12.85097 -12.83183 -12.70432 -12.52231 -12.25083 -12.22451 -12.16971 -11.54324 -11.31027 -10.99994 -10.80985 -10.45249 -10.32548 -10.29667 -5.22756 -1.41737 -0.73621 -0.61515 0.63204 0.92765 1.14489 1.39819 1.55203 1.70918 1.80788 2.01344 2.29139 2.49720 2.61963 2.68084 2.78515 2.87458 3.02106 3.11621 3.29279 3.32322 3.41331 3.44820 3.51215 3.77049 3.82905 3.88003 3.96741 3.99138 4.03545 4.07771 4.16176 4.26326 4.29654 4.37816 4.42843 4.54565 4.57032 4.57994 4.62945 4.62999 4.77962 4.78474 4.89579 4.92684 5.07609 5.08069 5.19534 5.35776 5.43253 5.56959 6.27318 6.34276 7.36805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.704 5.704 9 C 0.159 3.841 10 H 0.132 0.868 11 C -0.112 4.112 12 C -0.648 4.648 13 H 0.161 0.839 14 S 2.588 3.412 15 O -0.908 6.908 16 O -0.941 6.941 17 O -0.644 6.644 18 C -0.001 4.001 19 C 0.127 3.873 20 F -0.107 7.107 21 C -0.116 4.116 22 C 0.003 3.997 23 C -0.078 4.078 24 O -0.541 6.541 25 Si 0.686 3.314 26 C -0.155 4.155 27 C 0.175 3.825 28 F -0.102 7.102 29 C -0.123 4.123 30 H 0.060 0.940 31 H 0.072 0.928 32 H 0.087 0.913 33 H 0.067 0.933 34 H 0.082 0.918 35 H 0.068 0.932 36 H 0.087 0.913 37 H 0.072 0.928 38 H 0.060 0.940 39 H 0.410 0.590 40 H 0.101 0.899 41 H 0.106 0.894 42 H 0.169 0.831 43 H 0.093 0.907 44 H 0.391 0.609 45 H -0.246 1.246 46 H -0.244 1.244 47 H 0.155 0.845 48 H 0.100 0.900 49 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.252 -6.608 -4.616 8.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.406 3.594 7 O -0.453 6.453 8 N -0.363 5.363 9 C 0.054 3.946 10 H 0.150 0.850 11 C -0.151 4.151 12 C -0.756 4.756 13 H 0.178 0.822 14 S 2.683 3.317 15 O -0.906 6.906 16 O -0.939 6.939 17 O -0.602 6.602 18 C -0.045 4.045 19 C 0.106 3.894 20 F -0.085 7.085 21 C -0.135 4.135 22 C 0.001 3.999 23 C -0.189 4.189 24 O -0.349 6.349 25 Si 0.586 3.414 26 C -0.174 4.174 27 C 0.153 3.847 28 F -0.080 7.080 29 C -0.162 4.162 30 H 0.079 0.921 31 H 0.091 0.909 32 H 0.106 0.894 33 H 0.086 0.914 34 H 0.101 0.899 35 H 0.087 0.913 36 H 0.106 0.894 37 H 0.091 0.909 38 H 0.079 0.921 39 H 0.246 0.754 40 H 0.120 0.880 41 H 0.124 0.876 42 H 0.186 0.814 43 H 0.111 0.889 44 H 0.240 0.760 45 H -0.170 1.170 46 H -0.168 1.168 47 H 0.172 0.828 48 H 0.119 0.881 49 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 0.304 -5.984 -3.344 6.862 hybrid contribution 0.064 1.173 -0.428 1.250 sum 0.369 -4.812 -3.772 6.125 Atomic orbital electron populations 1.22524 0.93790 1.05057 1.02785 1.22143 0.94495 0.91599 0.81794 1.21882 1.02352 0.92302 1.03387 1.22524 1.01618 1.03417 0.96550 1.86320 1.71382 1.23295 1.46789 1.18127 0.78571 0.80721 0.81944 1.90920 1.40788 1.70419 1.43189 1.44738 1.55657 1.11911 1.23991 1.22411 0.93902 0.79172 0.99121 0.84994 1.23077 0.94099 0.98477 0.99456 1.32196 1.08325 1.08770 1.26302 0.82166 1.05898 0.73217 0.75175 0.77438 1.93675 1.83772 1.43789 1.69394 1.93671 1.60300 1.57372 1.82568 1.85797 1.63255 1.28925 1.82250 1.17887 1.12346 0.79272 0.95039 1.17466 0.98787 0.86892 0.86301 1.91601 1.87761 1.60947 1.68213 1.21060 1.01262 0.88306 1.02893 1.19226 0.93816 0.95229 0.91582 1.24717 0.88892 0.95240 1.10006 1.86470 1.21910 1.34758 1.91748 0.94833 0.80187 0.88659 0.77755 1.20987 1.04212 0.94287 0.97907 1.17155 0.94503 0.91560 0.81517 1.91640 1.83149 1.93249 1.39947 1.23351 1.00217 0.92572 1.00110 0.92060 0.90891 0.89429 0.91370 0.89901 0.91341 0.89447 0.90894 0.92098 0.75439 0.88029 0.87584 0.81390 0.88899 0.75986 1.17034 1.16780 0.82764 0.88138 0.87151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.15 0.31 0.05 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.08 8.85 37.16 0.33 0.41 16 4 C -0.18 -0.23 8.37 37.16 0.31 0.08 16 5 O -0.36 -0.92 9.94 -40.33 -0.40 -1.32 16 6 C 0.65 1.80 8.06 54.05 0.44 2.23 16 7 O -0.56 -2.68 11.48 -19.29 -0.22 -2.90 16 8 N -0.70 -0.05 5.36 -57.85 -0.31 -0.36 16 9 C 0.16 -0.13 4.24 -67.03 -0.28 -0.41 16 10 H 0.13 -0.06 7.46 -51.93 -0.39 -0.45 16 11 C -0.11 0.24 7.42 -25.92 -0.19 0.04 16 12 C -0.65 0.52 3.31 -25.92 -0.09 0.43 16 13 H 0.16 -0.39 5.47 -51.93 -0.28 -0.68 16 14 S 2.59 7.50 5.12 -107.50 -0.55 6.95 16 15 O -0.91 -4.94 17.31 -67.04 -1.16 -6.10 16 16 O -0.94 -4.42 15.95 -67.04 -1.07 -5.49 16 17 O -0.64 -2.24 9.78 -52.11 -0.51 -2.75 16 18 C 0.00 0.00 4.81 -39.14 -0.19 -0.19 16 19 C 0.13 0.03 6.40 -39.31 -0.25 -0.22 16 20 F -0.11 0.04 14.42 2.25 0.03 0.07 16 21 C -0.12 0.16 9.58 -39.53 -0.38 -0.21 16 22 C 0.00 0.00 5.42 -104.61 -0.57 -0.57 16 23 C -0.08 0.29 2.81 36.01 0.10 0.39 16 24 O -0.54 1.90 12.74 -35.23 -0.45 1.45 16 25 Si 0.69 -2.62 29.78 -169.99 -5.06 -7.68 16 26 C -0.16 -0.10 8.64 -39.53 -0.34 -0.44 16 27 C 0.17 0.50 6.48 -39.31 -0.25 0.25 16 28 F -0.10 -0.46 16.73 2.25 0.04 -0.42 16 29 C -0.12 0.07 7.46 -25.83 -0.19 -0.13 16 30 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 34 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 39 H 0.41 -0.75 8.84 -40.82 -0.36 -1.12 16 40 H 0.10 -0.31 8.08 -51.93 -0.42 -0.73 16 41 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 42 H 0.17 -0.62 8.06 -52.49 -0.42 -1.04 16 43 H 0.09 -0.57 7.96 -51.93 -0.41 -0.98 16 44 H 0.39 -3.25 8.74 45.56 0.40 -2.85 16 45 H -0.25 0.34 7.11 56.52 0.40 0.74 16 46 H -0.24 0.14 7.11 56.52 0.40 0.54 16 47 H 0.16 -0.07 4.87 -52.49 -0.26 -0.33 16 48 H 0.10 -0.09 8.14 -51.93 -0.42 -0.52 16 49 H 0.11 -0.04 7.46 -51.93 -0.39 -0.42 16 LS Contribution 416.17 15.07 6.27 6.27 Total: 0.00 -11.34 416.17 -10.89 -22.23 By element: Atomic # 1 Polarization: -5.61 SS G_CDS: -6.15 Total: -11.75 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: -1.35 Total: 1.80 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -0.31 Total: -0.36 kcal Atomic # 8 Polarization: -13.30 SS G_CDS: -3.81 Total: -17.11 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.07 Total: -0.35 kcal Atomic # 14 Polarization: -2.62 SS G_CDS: -5.06 Total: -7.68 kcal Atomic # 16 Polarization: 7.50 SS G_CDS: -0.55 Total: 6.95 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -11.34 -10.89 -22.23 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_6672276_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -204.803 kcal (2) G-P(sol) polarization free energy of solvation -11.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.890 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.231 kcal (6) G-S(sol) free energy of system = (1) + (5) -227.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds