Wall clock time and date at job start Fri Mar 5 2021 23:56:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53006 * 109.47212 * 2 1 4 4 C 1.53008 * 109.47098 * 240.00422 * 2 1 3 5 5 O 1.45198 * 109.47365 * 120.00008 * 2 1 3 6 6 C 1.34643 * 116.99832 * 59.99875 * 5 2 1 7 7 O 1.21517 * 119.99554 * 0.02562 * 6 5 2 8 8 N 1.34771 * 120.00230 * 179.97438 * 6 5 2 9 9 C 1.46498 * 120.00097 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.84755 * 23.80940 * 9 8 6 11 11 C 1.53784 * 113.61228 * 155.00244 * 9 8 6 12 12 C 1.53778 * 87.08176 * 140.06745 * 11 9 8 13 13 H 1.08998 * 113.61372 * 89.20074 * 12 11 9 14 14 S 1.81397 * 113.61750 * 220.02071 * 12 11 9 15 15 O 1.42103 * 110.54415 * 66.84194 * 14 12 11 16 16 O 1.42101 * 110.54379 * 290.09592 * 14 12 11 17 17 O 1.52192 * 104.45236 * 178.46917 * 14 12 11 18 18 C 1.36015 * 113.99976 * 75.00049 * 17 14 12 19 19 C 1.38837 * 120.06604 * 270.27623 * 18 17 14 20 20 F 1.35097 * 120.03645 * 359.97438 * 19 18 17 21 21 C 1.38373 * 119.92880 * 180.23546 * 19 18 17 22 22 C 1.38255 * 120.06679 * 359.48544 * 21 19 18 23 23 C 1.50702 * 119.92771 * 180.23604 * 22 21 19 24 24 O 1.42904 * 109.47477 * 300.00020 * 23 22 21 25 25 Si 1.86308 * 109.46892 * 180.02562 * 23 22 21 26 26 C 1.38249 * 120.14250 * 0.26054 * 22 21 19 27 27 C 1.38374 * 120.06670 * 359.97438 * 26 22 21 28 28 F 1.35098 * 120.03389 * 180.02562 * 27 26 22 29 29 C 1.53782 * 87.17051 * 334.60993 * 12 11 9 30 30 H 1.09005 * 109.47249 * 300.00151 * 1 2 3 31 31 H 1.09003 * 109.47180 * 59.99548 * 1 2 3 32 32 H 1.08998 * 109.47411 * 180.02562 * 1 2 3 33 33 H 1.08999 * 109.47388 * 180.02562 * 3 2 1 34 34 H 1.08996 * 109.47047 * 300.00158 * 3 2 1 35 35 H 1.09002 * 109.46706 * 60.00042 * 3 2 1 36 36 H 1.08998 * 109.46604 * 300.00022 * 4 2 1 37 37 H 1.09003 * 109.47081 * 59.99969 * 4 2 1 38 38 H 1.08994 * 109.46616 * 179.97438 * 4 2 1 39 39 H 0.97010 * 119.99664 * 0.02562 * 8 6 5 40 40 H 1.08998 * 113.61438 * 25.52106 * 11 9 8 41 41 H 1.08994 * 113.69337 * 254.62771 * 11 9 8 42 42 H 1.08002 * 119.96923 * 179.77183 * 21 19 18 43 43 H 1.09000 * 109.47353 * 60.00637 * 23 22 21 44 44 H 0.96699 * 114.00166 * 180.02562 * 24 23 22 45 45 H 1.48493 * 110.00285 * 298.68270 * 25 23 22 46 46 H 1.48500 * 109.99823 * 60.00177 * 25 23 22 47 47 H 1.07995 * 119.96948 * 180.02562 * 26 22 21 48 48 H 1.09005 * 113.61438 * 139.93620 * 29 12 11 49 49 H 1.08996 * 113.61599 * 270.83620 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2494 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9515 -2.5097 0.5034 8 7 2.0680 -2.6658 2.4165 9 6 1.6739 -4.0669 2.5830 10 1 1.4208 -4.5503 1.6394 11 6 2.6474 -4.8817 3.4509 12 6 1.4102 -5.5559 4.0670 13 1 1.0859 -6.4473 3.5300 14 16 1.5425 -5.8209 5.8566 15 8 1.5556 -4.5779 6.5452 16 8 2.5050 -6.8265 6.1421 17 8 0.2135 -6.4519 6.2464 18 6 0.0945 -7.7580 5.8861 19 6 -0.4290 -8.0921 4.6444 20 9 -0.8215 -7.1201 3.7922 21 6 -0.5534 -9.4220 4.2827 22 6 -0.1471 -10.4172 5.1522 23 6 -0.2790 -11.8643 4.7529 24 8 -1.6529 -12.1654 4.4999 25 14 0.3500 -12.9486 6.1313 26 6 0.3795 -10.0876 6.3873 27 6 0.5019 -8.7597 6.7568 28 9 1.0170 -8.4384 7.9636 29 6 0.6254 -4.2888 3.6882 30 1 -0.3634 0.5139 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 3.1300 1.4426 -0.0005 34 1 1.6766 1.9564 -0.8899 35 1 1.6766 1.9563 0.8900 36 1 1.6766 -1.7488 -1.2493 37 1 1.6766 -0.2073 -2.1393 38 1 3.1299 -0.7208 -1.2495 39 1 2.6277 -2.2369 3.0828 40 1 3.2126 -4.2759 4.1592 41 1 3.2775 -5.5636 2.8800 42 1 -0.9639 -9.6827 3.3184 43 1 0.3051 -12.0472 3.8510 44 1 -1.8128 -13.0823 4.2377 45 1 1.7862 -12.6678 6.3832 46 1 -0.4387 -12.7087 7.3664 47 1 0.6963 -10.8672 7.0641 48 1 -0.3754 -4.4926 3.3073 49 1 0.6368 -3.5207 4.4614 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_6672276_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:56:55 Heat of formation + Delta-G solvation = -231.067074 kcal Electronic energy + Delta-G solvation = -40462.956469 eV Core-core repulsion = 34736.958367 eV Total energy + Delta-G solvation = -5725.998102 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.118 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.69917 -50.64884 -42.32264 -41.96801 -40.41075 -40.19839 -38.71876 -37.96426 -37.62445 -37.41784 -35.45154 -34.23120 -32.68313 -32.08167 -28.38501 -28.32657 -27.51125 -27.39203 -27.14408 -24.93738 -23.94552 -23.59275 -22.32347 -21.62276 -20.99374 -20.06637 -19.75847 -19.44581 -19.18816 -19.04218 -18.64977 -18.32905 -17.67355 -17.52233 -17.30451 -17.26063 -17.11968 -16.96470 -16.59651 -16.43160 -16.06120 -15.94687 -15.64346 -15.52244 -15.41776 -15.26076 -14.56022 -14.51319 -14.44165 -14.31790 -14.10141 -13.97720 -13.84741 -13.71846 -13.62305 -13.51690 -13.35945 -13.28522 -13.17593 -13.07540 -12.94143 -12.91481 -12.89397 -12.59457 -12.56517 -12.33039 -12.15470 -12.07266 -11.57783 -11.42547 -11.16511 -10.67248 -10.41316 -10.34783 -10.22486 -4.96292 -1.53298 -0.79167 -0.65302 0.48363 1.08989 1.20861 1.53111 1.64486 1.67802 1.95968 1.97831 2.15898 2.38583 2.65171 2.68426 2.85908 2.86743 2.99829 3.10013 3.34078 3.38961 3.45785 3.52373 3.70395 3.71542 3.77427 3.92091 3.98324 4.02650 4.11015 4.22550 4.26385 4.32925 4.39638 4.48370 4.48942 4.56792 4.59682 4.62521 4.66580 4.70100 4.74826 4.79440 4.85538 4.87060 5.08318 5.08973 5.21216 5.25343 5.32470 5.52451 6.28346 6.90017 7.24584 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.126 3.874 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.370 6.370 6 C 0.647 3.353 7 O -0.587 6.587 8 N -0.695 5.695 9 C 0.159 3.841 10 H 0.133 0.867 11 C -0.110 4.110 12 C -0.624 4.624 13 H 0.182 0.818 14 S 2.580 3.420 15 O -0.946 6.946 16 O -0.967 6.967 17 O -0.657 6.657 18 C -0.023 4.023 19 C 0.130 3.870 20 F -0.103 7.103 21 C -0.099 4.099 22 C 0.001 3.999 23 C -0.072 4.072 24 O -0.556 6.556 25 Si 0.760 3.240 26 C -0.161 4.161 27 C 0.143 3.857 28 F -0.123 7.123 29 C -0.129 4.129 30 H 0.060 0.940 31 H 0.087 0.913 32 H 0.066 0.934 33 H 0.069 0.931 34 H 0.099 0.901 35 H 0.067 0.933 36 H 0.066 0.934 37 H 0.087 0.913 38 H 0.062 0.938 39 H 0.419 0.581 40 H 0.111 0.889 41 H 0.130 0.870 42 H 0.202 0.798 43 H 0.132 0.868 44 H 0.413 0.587 45 H -0.283 1.283 46 H -0.296 1.296 47 H 0.156 0.844 48 H 0.106 0.894 49 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.016 -7.429 -7.377 10.469 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.090 3.910 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.284 6.284 6 C 0.400 3.600 7 O -0.478 6.478 8 N -0.355 5.355 9 C 0.054 3.946 10 H 0.151 0.849 11 C -0.149 4.149 12 C -0.735 4.735 13 H 0.199 0.801 14 S 2.680 3.320 15 O -0.944 6.944 16 O -0.965 6.965 17 O -0.615 6.615 18 C -0.067 4.067 19 C 0.108 3.892 20 F -0.081 7.081 21 C -0.117 4.117 22 C 0.000 4.000 23 C -0.183 4.183 24 O -0.367 6.367 25 Si 0.666 3.334 26 C -0.180 4.180 27 C 0.122 3.878 28 F -0.101 7.101 29 C -0.169 4.169 30 H 0.079 0.921 31 H 0.106 0.894 32 H 0.085 0.915 33 H 0.088 0.912 34 H 0.117 0.883 35 H 0.086 0.914 36 H 0.085 0.915 37 H 0.105 0.895 38 H 0.081 0.919 39 H 0.256 0.744 40 H 0.129 0.871 41 H 0.149 0.851 42 H 0.219 0.781 43 H 0.150 0.850 44 H 0.266 0.734 45 H -0.210 1.210 46 H -0.224 1.224 47 H 0.173 0.827 48 H 0.124 0.876 49 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 0.076 -6.840 -6.067 9.143 hybrid contribution 0.087 1.378 0.436 1.448 sum 0.163 -5.462 -5.630 7.846 Atomic orbital electron populations 1.22480 0.94001 1.03820 1.03480 1.22381 0.94494 0.92567 0.81538 1.21899 1.02481 0.90979 1.04206 1.22472 1.01667 1.02339 0.97171 1.86326 1.71470 1.23254 1.47379 1.18342 0.78513 0.80830 0.82266 1.90907 1.41881 1.70843 1.44160 1.44763 1.55167 1.12128 1.23411 1.22444 0.94238 0.78848 0.99069 0.84917 1.23254 0.93804 0.98540 0.99301 1.32027 1.09628 1.09715 1.22126 0.80070 1.05954 0.72761 0.74148 0.79099 1.93619 1.84290 1.44921 1.71573 1.93629 1.61178 1.57780 1.83915 1.85749 1.63078 1.29642 1.83047 1.18212 1.13661 0.78668 0.96181 1.17536 0.98524 0.87680 0.85478 1.91611 1.87642 1.61010 1.67803 1.21433 0.99511 0.87056 1.03736 1.19653 0.92504 0.97200 0.90621 1.24689 0.89666 0.92653 1.11277 1.86424 1.21469 1.36952 1.91876 0.94106 0.76318 0.87387 0.75602 1.21168 1.04430 0.93439 0.98937 1.17532 0.96157 0.92771 0.81389 1.91572 1.83796 1.93519 1.41232 1.23445 1.00797 0.92491 1.00150 0.92140 0.89406 0.91544 0.91159 0.88254 0.91354 0.91500 0.89457 0.91898 0.74398 0.87086 0.85132 0.78130 0.85023 0.73388 1.20979 1.22358 0.82711 0.87553 0.87593 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 2 C 0.13 0.34 1.13 -10.79 -0.01 0.33 16 3 C -0.14 0.26 8.85 71.98 0.64 0.90 16 4 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 5 O -0.37 -1.96 9.94 -55.53 -0.55 -2.52 16 6 C 0.65 3.79 8.06 129.79 1.05 4.84 16 7 O -0.59 -5.95 11.48 19.79 0.23 -5.73 16 8 N -0.70 -0.06 5.36 -567.33 -3.04 -3.11 16 9 C 0.16 -0.34 4.24 45.58 0.19 -0.14 16 10 H 0.13 -0.23 7.46 -2.39 -0.02 -0.25 16 11 C -0.11 0.56 7.42 31.12 0.23 0.79 16 12 C -0.62 1.09 3.31 31.12 0.10 1.20 16 13 H 0.18 -1.10 5.47 -2.39 -0.01 -1.11 16 14 S 2.58 19.60 5.12 -56.49 -0.29 19.31 16 15 O -0.95 -12.69 17.31 -118.57 -2.05 -14.74 16 16 O -0.97 -11.21 15.95 -118.57 -1.89 -13.10 16 17 O -0.66 -6.01 9.78 -62.81 -0.61 -6.63 16 18 C -0.02 -0.15 4.81 22.56 0.11 -0.04 16 19 C 0.13 -0.01 6.40 22.45 0.14 0.14 16 20 F -0.10 0.18 14.42 44.97 0.65 0.83 16 21 C -0.10 0.47 9.58 22.31 0.21 0.69 16 22 C 0.00 0.00 5.42 -19.86 -0.11 -0.11 16 23 C -0.07 0.71 2.81 71.24 0.20 0.91 16 24 O -0.56 5.45 12.74 -148.98 -1.90 3.55 16 25 Si 0.76 -5.87 29.78 68.60 2.04 -3.83 16 26 C -0.16 -0.39 8.64 22.30 0.19 -0.20 16 27 C 0.14 1.15 6.48 22.44 0.15 1.29 16 28 F -0.12 -1.56 16.73 44.97 0.75 -0.81 16 29 C -0.13 0.13 7.46 31.18 0.23 0.36 16 30 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 31 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 32 H 0.07 0.52 5.88 -2.39 -0.01 0.50 16 33 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 34 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 35 H 0.07 -0.12 8.14 -2.39 -0.02 -0.13 16 36 H 0.07 0.47 5.88 -2.39 -0.01 0.46 16 37 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 38 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 39 H 0.42 -1.56 8.84 -92.70 -0.82 -2.38 16 40 H 0.11 -0.73 8.08 -2.39 -0.02 -0.75 16 41 H 0.13 -1.23 8.14 -2.39 -0.02 -1.25 16 42 H 0.20 -2.28 8.06 -2.91 -0.02 -2.30 16 43 H 0.13 -2.18 7.96 -2.39 -0.02 -2.20 16 44 H 0.41 -8.15 8.74 -74.06 -0.65 -8.80 16 45 H -0.28 0.48 7.11 99.48 0.71 1.18 16 46 H -0.30 -0.25 7.11 99.48 0.71 0.45 16 47 H 0.16 0.18 4.87 -2.91 -0.01 0.16 16 48 H 0.11 -0.21 8.14 -2.38 -0.02 -0.23 16 49 H 0.11 0.03 7.46 -2.39 -0.02 0.01 16 Total: 0.00 -30.34 416.17 -2.52 -32.85 By element: Atomic # 1 Polarization: -16.89 SS G_CDS: -0.38 Total: -17.27 kcal Atomic # 6 Polarization: 6.65 SS G_CDS: 4.53 Total: 11.18 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -3.04 Total: -3.11 kcal Atomic # 8 Polarization: -32.38 SS G_CDS: -6.78 Total: -39.16 kcal Atomic # 9 Polarization: -1.38 SS G_CDS: 1.40 Total: 0.02 kcal Atomic # 14 Polarization: -5.87 SS G_CDS: 2.04 Total: -3.83 kcal Atomic # 16 Polarization: 19.60 SS G_CDS: -0.29 Total: 19.31 kcal Total: -30.34 -2.52 -32.85 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_6672276_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -198.214 kcal (2) G-P(sol) polarization free energy of solvation -30.335 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -228.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.518 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.853 kcal (6) G-S(sol) free energy of system = (1) + (5) -231.067 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds