Wall clock time and date at job start Sat Mar 6 2021 00:00:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52997 * 109.47449 * 2 1 4 4 C 1.52995 * 109.47016 * 239.99884 * 2 1 3 5 5 O 1.45199 * 109.46980 * 120.00120 * 2 1 3 6 6 C 1.34638 * 116.99977 * 59.99868 * 5 2 1 7 7 O 1.21509 * 120.00100 * 359.97438 * 6 5 2 8 8 N 1.34784 * 119.99957 * 180.02562 * 6 5 2 9 9 C 1.46496 * 119.99758 * 179.97438 * 8 6 5 10 10 H 1.09001 * 112.85032 * 336.19438 * 9 8 6 11 11 C 1.53782 * 113.68971 * 107.45966 * 9 8 6 12 12 C 1.53962 * 87.11063 * 89.19569 * 11 9 8 13 13 H 1.08993 * 113.61598 * 270.84305 * 12 11 9 14 14 S 1.81404 * 113.66432 * 139.88959 * 12 11 9 15 15 O 1.42106 * 110.53824 * 194.17899 * 14 12 11 16 16 O 1.42104 * 110.54409 * 330.92322 * 14 12 11 17 17 O 1.52194 * 104.45026 * 82.55531 * 14 12 11 18 18 C 1.36004 * 114.00435 * 74.99459 * 17 14 12 19 19 C 1.38834 * 120.07015 * 269.73105 * 18 17 14 20 20 F 1.35092 * 120.03827 * 359.97033 * 19 18 17 21 21 C 1.38373 * 119.92585 * 179.69801 * 19 18 17 22 22 C 1.38251 * 120.07374 * 0.57253 * 21 19 18 23 23 C 1.50696 * 119.93344 * 179.74399 * 22 21 19 24 24 O 1.42906 * 109.47219 * 119.97963 * 23 22 21 25 25 Si 1.86298 * 109.47375 * 359.97438 * 23 22 21 26 26 C 1.38252 * 120.13774 * 359.72268 * 22 21 19 27 27 C 1.38377 * 120.06640 * 359.97438 * 26 22 21 28 28 F 1.35104 * 120.03172 * 180.02562 * 27 26 22 29 29 C 1.53781 * 113.61266 * 204.99541 * 9 8 6 30 30 H 1.09005 * 109.46789 * 300.00103 * 1 2 3 31 31 H 1.09001 * 109.46666 * 59.99690 * 1 2 3 32 32 H 1.08990 * 109.47490 * 179.97438 * 1 2 3 33 33 H 1.08996 * 109.47268 * 179.97438 * 3 2 1 34 34 H 1.08997 * 109.47106 * 300.00203 * 3 2 1 35 35 H 1.09009 * 109.46731 * 60.00053 * 3 2 1 36 36 H 1.09004 * 109.47194 * 300.00510 * 4 2 1 37 37 H 1.08999 * 109.47412 * 59.99988 * 4 2 1 38 38 H 1.08997 * 109.47352 * 180.02562 * 4 2 1 39 39 H 0.97001 * 119.99554 * 359.97438 * 8 6 5 40 40 H 1.08997 * 113.61668 * 203.67120 * 11 9 8 41 41 H 1.08998 * 113.61674 * 334.49629 * 11 9 8 42 42 H 1.07999 * 119.96343 * 180.29429 * 21 19 18 43 43 H 1.09003 * 109.47287 * 239.97476 * 23 22 21 44 44 H 0.96699 * 113.99512 * 300.00093 * 24 23 22 45 45 H 1.48494 * 110.00352 * 179.97438 * 25 23 22 46 46 H 1.48502 * 109.99990 * 301.32166 * 25 23 22 47 47 H 1.08004 * 119.97060 * 179.97438 * 26 22 21 48 48 H 1.09002 * 113.61445 * 25.35018 * 29 9 8 49 49 H 1.09002 * 113.61408 * 156.16749 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5040 8 7 2.0672 -2.6655 2.4172 9 6 1.6730 -4.0666 2.5836 10 1 0.7586 -4.3159 2.0452 11 6 2.8194 -5.0635 2.3453 12 6 3.1475 -4.9246 3.8431 13 1 3.8460 -4.1176 4.0641 14 16 3.6039 -6.4906 4.6368 15 8 3.5743 -6.3597 6.0515 16 8 2.9662 -7.5826 3.9886 17 8 5.0791 -6.6677 4.3070 18 6 5.9071 -5.8619 5.0245 19 6 6.2469 -4.6059 4.5403 20 9 5.7560 -4.1825 3.3551 21 6 7.0846 -3.7860 5.2757 22 6 7.5924 -4.2209 6.4858 23 6 8.5089 -3.3277 7.2813 24 8 7.9259 -3.0637 8.5590 25 14 8.7580 -1.7227 6.3688 26 6 7.2607 -5.4736 6.9678 27 6 6.4186 -6.2958 6.2401 28 9 6.0945 -7.5195 6.7120 29 6 1.6735 -4.5368 4.0478 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3634 -1.0275 -0.0005 33 1 3.1301 1.4424 0.0005 34 1 1.6768 1.9563 -0.8899 35 1 1.6768 1.9563 0.8901 36 1 1.6766 -1.7489 -1.2492 37 1 1.6767 -0.2075 -2.1392 38 1 3.1300 -0.7217 -1.2490 39 1 2.6268 -2.2366 3.0834 40 1 2.4799 -6.0605 2.0647 41 1 3.6004 -4.6817 1.6878 42 1 7.3455 -2.8069 4.9019 43 1 9.4710 -3.8220 7.4162 44 1 7.0658 -2.6239 8.5155 45 1 9.6596 -0.8326 7.1432 46 1 9.3344 -1.9862 5.0258 47 1 7.6593 -5.8108 7.9132 48 1 1.5300 -3.7294 4.7658 49 1 1.0195 -5.3890 4.2329 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_6672276_17701012.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:00:52 Heat of formation + Delta-G solvation = -230.815238 kcal Electronic energy + Delta-G solvation = -41166.283257 eV Core-core repulsion = 35440.296075 eV Total energy + Delta-G solvation = -5725.987182 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.118 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -50.61164 -50.46731 -42.20806 -41.95731 -40.41307 -40.17171 -38.61827 -37.87794 -37.52367 -37.39374 -35.35428 -34.00585 -32.45729 -31.93755 -28.35173 -28.28141 -27.44787 -27.39787 -27.07831 -24.76962 -23.99955 -23.75693 -22.23635 -21.31710 -20.95340 -19.92433 -19.66584 -19.53675 -19.18493 -19.03569 -18.33698 -17.80639 -17.58937 -17.27268 -17.18725 -17.15986 -16.96938 -16.80143 -16.65223 -16.19152 -16.15266 -15.76250 -15.73164 -15.49033 -15.38643 -15.22183 -14.56833 -14.47867 -14.33536 -14.25870 -14.21694 -14.06947 -13.88375 -13.65839 -13.60913 -13.51375 -13.32976 -13.13291 -13.09743 -13.07924 -12.90865 -12.84623 -12.53944 -12.35115 -12.30191 -12.16979 -12.03216 -12.00381 -11.47025 -11.38005 -11.13033 -10.66467 -10.33378 -10.30340 -10.26196 -4.98378 -1.41227 -0.63657 -0.53720 0.60723 1.07291 1.22387 1.64238 1.70535 1.71630 2.01845 2.11268 2.27662 2.48002 2.76492 2.84392 2.94183 3.02309 3.10395 3.16239 3.43585 3.50017 3.59622 3.66470 3.70233 3.75712 3.81355 3.96111 4.09232 4.13380 4.30888 4.36864 4.38471 4.41183 4.49313 4.51007 4.54661 4.62654 4.63006 4.70800 4.75050 4.76544 4.78805 4.83455 4.90151 4.90678 5.13356 5.20970 5.27352 5.29053 5.37296 5.58144 6.35686 6.76404 7.31558 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C 0.129 3.871 3 C -0.138 4.138 4 C -0.182 4.182 5 O -0.364 6.364 6 C 0.648 3.352 7 O -0.590 6.590 8 N -0.680 5.680 9 C 0.153 3.847 10 H 0.114 0.886 11 C -0.126 4.126 12 C -0.628 4.628 13 H 0.181 0.819 14 S 2.579 3.421 15 O -0.965 6.965 16 O -0.952 6.952 17 O -0.660 6.660 18 C -0.024 4.024 19 C 0.131 3.869 20 F -0.105 7.105 21 C -0.130 4.130 22 C -0.032 4.032 23 C -0.075 4.075 24 O -0.546 6.546 25 Si 0.777 3.223 26 C -0.114 4.114 27 C 0.136 3.864 28 F -0.126 7.126 29 C -0.106 4.106 30 H 0.064 0.936 31 H 0.084 0.916 32 H 0.064 0.936 33 H 0.071 0.929 34 H 0.095 0.905 35 H 0.071 0.929 36 H 0.064 0.936 37 H 0.084 0.916 38 H 0.063 0.937 39 H 0.421 0.579 40 H 0.114 0.886 41 H 0.100 0.900 42 H 0.193 0.807 43 H 0.132 0.868 44 H 0.401 0.599 45 H -0.296 1.296 46 H -0.273 1.273 47 H 0.176 0.824 48 H 0.129 0.871 49 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.462 10.437 1.346 10.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.239 4.239 2 C 0.093 3.907 3 C -0.195 4.195 4 C -0.239 4.239 5 O -0.278 6.278 6 C 0.402 3.598 7 O -0.481 6.481 8 N -0.340 5.340 9 C 0.047 3.953 10 H 0.132 0.868 11 C -0.165 4.165 12 C -0.739 4.739 13 H 0.198 0.802 14 S 2.680 3.320 15 O -0.963 6.963 16 O -0.950 6.950 17 O -0.618 6.618 18 C -0.068 4.068 19 C 0.109 3.891 20 F -0.083 7.083 21 C -0.148 4.148 22 C -0.034 4.034 23 C -0.184 4.184 24 O -0.355 6.355 25 Si 0.681 3.319 26 C -0.133 4.133 27 C 0.115 3.885 28 F -0.104 7.104 29 C -0.145 4.145 30 H 0.083 0.917 31 H 0.103 0.897 32 H 0.083 0.917 33 H 0.090 0.910 34 H 0.114 0.886 35 H 0.090 0.910 36 H 0.083 0.917 37 H 0.103 0.897 38 H 0.082 0.918 39 H 0.258 0.742 40 H 0.132 0.868 41 H 0.118 0.882 42 H 0.210 0.790 43 H 0.149 0.851 44 H 0.252 0.748 45 H -0.224 1.224 46 H -0.199 1.199 47 H 0.193 0.807 48 H 0.147 0.853 49 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 3.189 9.666 0.912 10.219 hybrid contribution 0.121 -0.999 -0.215 1.029 sum 3.310 8.667 0.697 9.303 Atomic orbital electron populations 1.22489 0.94100 1.03758 1.03537 1.22336 0.94388 0.92566 0.81406 1.21890 1.02559 0.90775 1.04243 1.22489 1.01722 1.02284 0.97415 1.86307 1.71384 1.22962 1.47180 1.18269 0.78464 0.80812 0.82267 1.90931 1.42020 1.71040 1.44077 1.44194 1.55165 1.11210 1.23449 1.21559 0.98249 0.78498 0.97011 0.86798 1.23350 1.00538 1.02491 0.90160 1.32353 1.10017 1.20996 1.10550 0.80167 1.05991 0.73195 0.78159 0.74672 1.93628 1.83848 1.87794 1.31057 1.93617 1.72903 1.50977 1.77507 1.85755 1.39309 1.66585 1.70200 1.18331 1.03640 0.91204 0.93631 1.17334 0.97838 0.90403 0.83525 1.91604 1.85091 1.89275 1.42347 1.21362 0.97053 1.01745 0.94630 1.20461 0.95425 0.93838 0.93655 1.25380 0.97173 1.06358 0.89519 1.86556 1.40940 1.82432 1.25550 0.93825 0.87596 0.74902 0.75588 1.21332 0.97039 0.93204 1.01715 1.17838 0.97013 0.82230 0.91448 1.91577 1.90838 1.40299 1.87694 1.23177 0.88683 1.04626 0.98034 0.91736 0.89705 0.91708 0.90996 0.88588 0.90974 0.91750 0.89689 0.91816 0.74160 0.86772 0.88163 0.79028 0.85127 0.74768 1.22390 1.19895 0.80657 0.85294 0.86206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.18 8.37 71.98 0.60 0.42 16 2 C 0.13 0.03 1.13 -10.79 -0.01 0.02 16 3 C -0.14 0.65 8.85 71.98 0.64 1.29 16 4 C -0.18 -0.21 8.37 71.98 0.60 0.39 16 5 O -0.36 -0.59 9.94 -55.48 -0.55 -1.14 16 6 C 0.65 1.93 8.06 129.79 1.05 2.98 16 7 O -0.59 -5.29 11.48 19.81 0.23 -5.06 16 8 N -0.68 2.60 5.27 -567.60 -2.99 -0.40 16 9 C 0.15 -0.58 4.32 45.52 0.20 -0.38 16 10 H 0.11 -0.15 7.46 -2.39 -0.02 -0.16 16 11 C -0.13 0.36 7.45 31.18 0.23 0.59 16 12 C -0.63 2.74 3.30 31.18 0.10 2.84 16 13 H 0.18 -1.74 5.41 -2.39 -0.01 -1.76 16 14 S 2.58 13.65 5.14 -56.49 -0.29 13.36 16 15 O -0.96 -8.53 15.95 -118.57 -1.89 -10.42 16 16 O -0.95 -11.72 17.27 -118.57 -2.05 -13.77 16 17 O -0.66 -4.23 9.78 -62.69 -0.61 -4.85 16 18 C -0.02 -0.06 4.80 22.55 0.11 0.05 16 19 C 0.13 -0.56 6.40 22.44 0.14 -0.42 16 20 F -0.11 0.57 14.48 44.97 0.65 1.22 16 21 C -0.13 1.25 8.64 22.30 0.19 1.44 16 22 C -0.03 0.27 5.39 -19.86 -0.11 0.17 16 23 C -0.07 0.76 2.82 71.23 0.20 0.96 16 24 O -0.55 4.75 12.77 -148.98 -1.90 2.85 16 25 Si 0.78 -8.62 29.78 68.60 2.04 -6.58 16 26 C -0.11 0.44 9.58 22.31 0.21 0.65 16 27 C 0.14 0.43 6.48 22.45 0.15 0.58 16 28 F -0.13 -1.13 16.73 44.97 0.75 -0.38 16 29 C -0.11 0.76 7.41 31.12 0.23 0.99 16 30 H 0.06 0.00 8.14 -2.38 -0.02 -0.02 16 31 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.06 0.40 5.88 -2.39 -0.01 0.39 16 33 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 34 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 35 H 0.07 -0.37 8.14 -2.38 -0.02 -0.39 16 36 H 0.06 0.42 5.88 -2.38 -0.01 0.40 16 37 H 0.08 -0.15 8.14 -2.39 -0.02 -0.16 16 38 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 39 H 0.42 -3.99 8.82 -92.71 -0.82 -4.80 16 40 H 0.11 -0.18 7.43 -2.39 -0.02 -0.20 16 41 H 0.10 -0.33 8.14 -2.39 -0.02 -0.35 16 42 H 0.19 -3.05 4.87 -2.91 -0.01 -3.07 16 43 H 0.13 -1.32 7.96 -2.39 -0.02 -1.34 16 44 H 0.40 -6.81 8.70 -74.06 -0.64 -7.46 16 45 H -0.30 0.66 7.11 99.48 0.71 1.36 16 46 H -0.27 1.95 7.11 99.48 0.71 2.65 16 47 H 0.18 -1.10 8.06 -2.91 -0.02 -1.12 16 48 H 0.13 -1.54 8.14 -2.39 -0.02 -1.56 16 49 H 0.12 -0.97 8.10 -2.39 -0.02 -0.99 16 Total: 0.00 -30.01 416.03 -2.45 -32.47 By element: Atomic # 1 Polarization: -19.49 SS G_CDS: -0.38 Total: -19.87 kcal Atomic # 6 Polarization: 8.04 SS G_CDS: 4.54 Total: 12.57 kcal Atomic # 7 Polarization: 2.60 SS G_CDS: -2.99 Total: -0.40 kcal Atomic # 8 Polarization: -25.62 SS G_CDS: -6.78 Total: -32.40 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 1.40 Total: 0.84 kcal Atomic # 14 Polarization: -8.62 SS G_CDS: 2.04 Total: -6.58 kcal Atomic # 16 Polarization: 13.65 SS G_CDS: -0.29 Total: 13.36 kcal Total: -30.01 -2.45 -32.47 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_6672276_17701012.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -198.349 kcal (2) G-P(sol) polarization free energy of solvation -30.012 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -228.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.466 kcal (6) G-S(sol) free energy of system = (1) + (5) -230.815 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds