Wall clock time and date at job start Sat Mar 6 2021 00:13:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47092 * 2 1 4 4 C 1.53002 * 109.47454 * 239.99992 * 2 1 3 5 5 O 1.45206 * 109.47129 * 119.99823 * 2 1 3 6 6 C 1.34636 * 117.00048 * 60.00363 * 5 2 1 7 7 O 1.21514 * 119.99573 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00282 * 179.97438 * 6 5 2 9 9 C 1.46497 * 120.00206 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.84865 * 23.80487 * 9 8 6 11 11 C 1.53779 * 113.61241 * 155.00040 * 9 8 6 12 12 C 1.53782 * 87.07952 * 139.98216 * 11 9 8 13 13 H 1.08999 * 113.61337 * 89.11699 * 12 11 9 14 14 S 1.81404 * 113.61639 * 220.01731 * 12 11 9 15 15 O 1.42100 * 110.54296 * 291.62797 * 14 12 11 16 16 O 1.42100 * 110.53955 * 68.37782 * 14 12 11 17 17 O 1.52195 * 104.44878 * 180.02562 * 14 12 11 18 18 C 1.35953 * 114.00464 * 75.00068 * 17 14 12 19 19 C 1.38915 * 120.06259 * 89.99604 * 18 17 14 20 20 F 1.35102 * 120.04206 * 0.02562 * 19 18 17 21 21 C 1.38325 * 119.90556 * 179.97438 * 19 18 17 22 22 C 1.38259 * 120.03146 * 0.02562 * 21 19 18 23 23 C 1.50695 * 119.93850 * 179.97438 * 22 21 19 24 24 O 1.42906 * 109.47013 * 65.00352 * 23 22 21 25 25 Si 1.86302 * 109.47193 * 185.00123 * 23 22 21 26 26 C 1.38262 * 120.12232 * 359.97438 * 22 21 19 27 27 C 1.38177 * 120.09972 * 359.74590 * 26 22 21 28 28 C 1.53782 * 113.61440 * 252.50147 * 9 8 6 29 29 H 1.09004 * 109.47059 * 299.99666 * 1 2 3 30 30 H 1.08992 * 109.47060 * 60.00150 * 1 2 3 31 31 H 1.09004 * 109.46930 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.47375 * 179.97438 * 3 2 1 33 33 H 1.09002 * 109.47045 * 299.99867 * 3 2 1 34 34 H 1.09000 * 109.47140 * 59.99774 * 3 2 1 35 35 H 1.09004 * 109.47006 * 299.99897 * 4 2 1 36 36 H 1.09002 * 109.46838 * 59.99394 * 4 2 1 37 37 H 1.08992 * 109.47056 * 180.02562 * 4 2 1 38 38 H 0.97003 * 119.99726 * 0.02562 * 8 6 5 39 39 H 1.08999 * 113.61783 * 254.52636 * 11 9 8 40 40 H 1.08995 * 113.61541 * 25.35465 * 11 9 8 41 41 H 1.08004 * 119.98778 * 180.02562 * 21 19 18 42 42 H 1.08995 * 109.47595 * 305.00250 * 23 22 21 43 43 H 0.96702 * 113.99631 * 180.02562 * 24 23 22 44 44 H 1.48500 * 109.99993 * 300.00066 * 25 23 22 45 45 H 1.48496 * 109.99696 * 61.31868 * 25 23 22 46 46 H 1.08006 * 119.95033 * 180.02562 * 26 22 21 47 47 H 1.08002 * 120.02245 * 180.25818 * 27 26 22 48 48 H 1.08997 * 113.61709 * 334.56072 * 28 9 8 49 49 H 1.08994 * 113.61835 * 105.47378 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6524 -1.9723 1.3384 7 8 0.9510 -2.5094 0.5040 8 7 2.0681 -2.6657 2.4167 9 6 1.6741 -4.0668 2.5832 10 1 1.4210 -4.5503 1.6396 11 6 2.6476 -4.8815 3.4512 12 6 1.4103 -5.5542 4.0688 13 1 1.0840 -6.4449 3.5321 14 16 1.5438 -5.8176 5.8587 15 8 2.5308 -6.7986 6.1461 16 8 1.5228 -4.5753 6.5483 17 8 0.2304 -6.4833 6.2435 18 6 0.1464 -7.7911 5.8817 19 6 0.5768 -8.7833 6.7534 20 9 1.0791 -8.4501 7.9625 21 6 0.4894 -10.1130 6.3822 22 6 -0.0252 -10.4536 5.1450 23 6 -0.1190 -11.9027 4.7424 24 8 -1.0444 -12.5759 5.5983 25 14 -0.7060 -12.0205 2.9783 26 6 -0.4540 -9.4670 4.2763 27 6 -0.3744 -8.1374 4.6441 28 6 0.6285 -4.2854 3.6894 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 3.1300 1.4425 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6766 1.9563 0.8900 35 1 1.6768 -1.7490 -1.2492 36 1 1.6767 -0.2074 -2.1392 37 1 3.1300 -0.7216 -1.2489 38 1 2.6277 -2.2368 3.0829 39 1 3.2760 -5.5643 2.8793 40 1 3.2149 -4.2753 4.1574 41 1 0.8232 -10.8855 7.0591 42 1 0.8624 -12.3686 4.8306 43 1 -1.1549 -13.5152 5.3968 44 1 -2.0434 -11.3889 2.8448 45 1 0.2640 -11.3517 2.0745 46 1 -0.8559 -9.7362 3.3107 47 1 -0.7135 -7.3680 3.9663 48 1 0.6428 -3.5165 4.4619 49 1 -0.3732 -4.4870 3.3099 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_7834718_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:13:42 Heat of formation + Delta-G solvation = -189.112807 kcal Electronic energy + Delta-G solvation = -37192.123820 eV Core-core repulsion = 31937.398967 eV Total energy + Delta-G solvation = -5254.724853 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.128 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -50.17260 -42.26346 -41.90030 -40.47874 -40.03393 -38.40540 -37.88310 -37.62437 -37.27824 -35.36962 -34.21492 -32.64839 -32.21191 -28.35578 -28.32380 -27.50486 -27.29634 -27.20339 -24.70201 -23.78958 -23.44177 -22.02653 -21.60653 -20.94919 -19.75092 -19.25670 -19.20476 -18.93202 -18.68178 -18.28662 -18.13218 -17.39103 -17.18208 -17.01898 -16.91342 -16.61954 -16.37909 -15.96769 -15.70927 -15.56474 -15.50536 -15.35646 -15.09993 -14.48711 -14.45473 -14.39859 -14.32199 -14.12813 -14.08889 -13.94533 -13.56356 -13.43061 -13.39787 -13.35775 -13.25206 -13.16149 -13.02694 -12.88306 -12.86132 -12.66616 -12.58565 -12.55135 -12.28664 -12.21720 -12.15432 -11.56992 -11.34334 -11.03927 -10.68612 -10.41283 -10.35016 -10.12838 -5.18506 -1.30002 -0.45777 -0.35232 0.76437 1.00187 1.10669 1.42978 1.71618 1.76602 1.85098 2.32963 2.48603 2.59195 2.72365 2.93292 2.94612 3.07614 3.16830 3.23549 3.36473 3.38403 3.62104 3.65671 3.74030 3.76135 3.80023 3.93860 3.98401 4.05020 4.11061 4.21921 4.31224 4.36435 4.45257 4.45739 4.47357 4.53260 4.55993 4.60273 4.61728 4.74313 4.75544 4.84748 4.86566 4.89630 5.05198 5.15238 5.30566 5.32627 5.39627 5.53551 6.29968 6.36751 7.32567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.653 3.347 7 O -0.565 6.565 8 N -0.705 5.705 9 C 0.158 3.842 10 H 0.132 0.868 11 C -0.112 4.112 12 C -0.650 4.650 13 H 0.160 0.840 14 S 2.595 3.405 15 O -0.941 6.941 16 O -0.912 6.912 17 O -0.651 6.651 18 C 0.033 3.967 19 C 0.140 3.860 20 F -0.112 7.112 21 C -0.109 4.109 22 C -0.026 4.026 23 C -0.080 4.080 24 O -0.543 6.543 25 Si 0.689 3.311 26 C -0.118 4.118 27 C -0.093 4.093 28 C -0.126 4.126 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.082 0.918 34 H 0.068 0.932 35 H 0.086 0.914 36 H 0.072 0.928 37 H 0.060 0.940 38 H 0.410 0.590 39 H 0.105 0.895 40 H 0.102 0.898 41 H 0.159 0.841 42 H 0.086 0.914 43 H 0.388 0.612 44 H -0.246 1.246 45 H -0.249 1.249 46 H 0.143 0.857 47 H 0.157 0.843 48 H 0.112 0.888 49 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.062 -5.107 -5.560 7.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.407 3.593 7 O -0.454 6.454 8 N -0.363 5.363 9 C 0.052 3.948 10 H 0.150 0.850 11 C -0.151 4.151 12 C -0.758 4.758 13 H 0.177 0.823 14 S 2.689 3.311 15 O -0.939 6.939 16 O -0.910 6.910 17 O -0.610 6.610 18 C -0.010 4.010 19 C 0.119 3.881 20 F -0.090 7.090 21 C -0.128 4.128 22 C -0.027 4.027 23 C -0.190 4.190 24 O -0.350 6.350 25 Si 0.589 3.411 26 C -0.136 4.136 27 C -0.113 4.113 28 C -0.165 4.165 29 H 0.080 0.920 30 H 0.091 0.909 31 H 0.105 0.895 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.087 0.913 35 H 0.105 0.895 36 H 0.091 0.909 37 H 0.079 0.921 38 H 0.246 0.754 39 H 0.124 0.876 40 H 0.120 0.880 41 H 0.177 0.823 42 H 0.104 0.896 43 H 0.237 0.763 44 H -0.170 1.170 45 H -0.174 1.174 46 H 0.160 0.840 47 H 0.175 0.825 48 H 0.130 0.870 49 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -0.575 -4.083 -5.681 7.020 hybrid contribution 0.428 0.716 0.461 0.954 sum -0.147 -3.367 -5.220 6.214 Atomic orbital electron populations 1.22526 0.93791 1.05030 1.02809 1.22148 0.94490 0.91616 0.81767 1.21884 1.02376 0.92277 1.03408 1.22524 1.01643 1.03389 0.96564 1.86322 1.71372 1.23267 1.46800 1.18127 0.78555 0.80735 0.81917 1.90916 1.40808 1.70450 1.43238 1.44742 1.55695 1.11892 1.24002 1.22405 0.94021 0.79275 0.99060 0.85031 1.23066 0.94160 0.98480 0.99426 1.32142 1.08310 1.08119 1.27180 0.82261 1.05649 0.73275 0.75018 0.77108 1.93675 1.59349 1.58568 1.82301 1.93671 1.84126 1.44055 1.69177 1.85759 1.63465 1.29331 1.82415 1.18016 1.09146 0.78040 0.95798 1.17735 0.96103 0.92629 0.81679 1.91606 1.84010 1.93006 1.40371 1.21064 1.00476 0.93797 0.97478 1.19436 0.95515 0.94523 0.93193 1.24769 0.97364 0.90216 1.06669 1.86491 1.63154 1.27280 1.58032 0.94780 0.80961 0.90954 0.74428 1.20866 1.00818 0.91648 1.00281 1.21177 0.98015 0.97986 0.94157 1.23355 1.00016 0.92958 1.00219 0.92044 0.90873 0.89459 0.91351 0.89877 0.91329 0.89480 0.90867 0.92077 0.75394 0.87600 0.88002 0.82291 0.89599 0.76325 1.17015 1.17372 0.84014 0.82531 0.86987 0.88341 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.21 8.37 37.16 0.31 0.11 16 2 C 0.14 0.15 1.13 -90.62 -0.10 0.05 16 3 C -0.14 0.11 8.85 37.16 0.33 0.44 16 4 C -0.18 -0.18 8.37 37.16 0.31 0.13 16 5 O -0.36 -0.80 9.94 -40.31 -0.40 -1.21 16 6 C 0.65 1.52 8.06 54.05 0.44 1.95 16 7 O -0.57 -2.41 11.48 -19.28 -0.22 -2.64 16 8 N -0.70 0.31 5.36 -57.93 -0.31 0.00 16 9 C 0.16 -0.25 4.24 -67.12 -0.28 -0.53 16 10 H 0.13 -0.17 7.46 -51.93 -0.39 -0.56 16 11 C -0.11 0.30 7.42 -25.92 -0.19 0.11 16 12 C -0.65 1.33 4.03 -25.92 -0.10 1.23 16 13 H 0.16 -0.72 6.13 -51.93 -0.32 -1.04 16 14 S 2.59 5.83 5.14 -107.50 -0.55 5.28 16 15 O -0.94 -4.30 15.95 -67.04 -1.07 -5.37 16 16 O -0.91 -4.59 17.27 -67.03 -1.16 -5.75 16 17 O -0.65 -1.81 9.92 -51.92 -0.51 -2.33 16 18 C 0.03 0.07 4.80 -39.17 -0.19 -0.12 16 19 C 0.14 0.44 6.48 -39.30 -0.25 0.19 16 20 F -0.11 -0.57 16.73 2.25 0.04 -0.53 16 21 C -0.11 -0.10 9.66 -39.54 -0.38 -0.48 16 22 C -0.03 0.01 5.38 -104.61 -0.56 -0.56 16 23 C -0.08 0.22 2.79 36.00 0.10 0.32 16 24 O -0.54 1.21 12.81 -35.23 -0.45 0.76 16 25 Si 0.69 -2.61 29.85 -169.99 -5.07 -7.69 16 26 C -0.12 0.10 8.66 -39.59 -0.34 -0.24 16 27 C -0.09 0.08 8.51 -39.45 -0.34 -0.26 16 28 C -0.13 0.22 7.44 -25.92 -0.19 0.03 16 29 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 30 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.09 0.26 5.88 -51.93 -0.31 -0.04 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 35 H 0.09 0.25 5.88 -51.93 -0.31 -0.05 16 36 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 37 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 38 H 0.41 -0.92 8.84 -40.82 -0.36 -1.28 16 39 H 0.11 -0.43 8.14 -51.93 -0.42 -0.86 16 40 H 0.10 -0.36 8.08 -51.93 -0.42 -0.78 16 41 H 0.16 -0.12 8.06 -52.48 -0.42 -0.54 16 42 H 0.09 -0.39 7.96 -51.93 -0.41 -0.81 16 43 H 0.39 -2.78 8.74 45.56 0.40 -2.38 16 44 H -0.25 0.23 7.05 56.52 0.40 0.63 16 45 H -0.25 0.43 7.11 56.52 0.40 0.84 16 46 H 0.14 -0.34 4.86 -52.48 -0.25 -0.59 16 47 H 0.16 -0.66 7.28 -52.49 -0.38 -1.05 16 48 H 0.11 -0.14 7.43 -51.93 -0.39 -0.52 16 49 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 LS Contribution 412.65 15.07 6.22 6.22 Total: 0.00 -12.29 412.65 -11.51 -23.81 By element: Atomic # 1 Polarization: -6.35 SS G_CDS: -6.56 Total: -12.92 kcal Atomic # 6 Polarization: 3.82 SS G_CDS: -1.46 Total: 2.36 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.31 Total: 0.00 kcal Atomic # 8 Polarization: -12.71 SS G_CDS: -3.81 Total: -16.53 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.04 Total: -0.53 kcal Atomic # 14 Polarization: -2.61 SS G_CDS: -5.07 Total: -7.69 kcal Atomic # 16 Polarization: 5.83 SS G_CDS: -0.55 Total: 5.28 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -12.29 -11.51 -23.81 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_7834718_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.305 kcal (2) G-P(sol) polarization free energy of solvation -12.294 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -177.599 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.808 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.113 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds