Wall clock time and date at job start Sat Mar 6 2021 00:17:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53003 * 109.47072 * 2 1 4 4 C 1.53000 * 109.46804 * 240.00349 * 2 1 3 5 5 O 1.45199 * 109.47316 * 120.00386 * 2 1 3 6 6 C 1.34644 * 116.99999 * 59.99640 * 5 2 1 7 7 O 1.21514 * 119.99948 * 0.02562 * 6 5 2 8 8 N 1.34769 * 119.99842 * 179.97438 * 6 5 2 9 9 C 1.46501 * 120.00019 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.90584 * 23.75829 * 9 8 6 11 11 C 1.53785 * 113.61120 * 155.00105 * 9 8 6 12 12 C 1.53778 * 87.16975 * 89.16494 * 11 9 8 13 13 H 1.09009 * 113.61366 * 270.83665 * 12 11 9 14 14 S 1.81403 * 113.61515 * 139.93816 * 12 11 9 15 15 O 1.42103 * 110.54070 * 297.03838 * 14 12 11 16 16 O 1.42098 * 110.54418 * 73.79208 * 14 12 11 17 17 O 1.52204 * 104.45085 * 185.41416 * 14 12 11 18 18 C 1.35960 * 113.99963 * 285.34191 * 17 14 12 19 19 C 1.38905 * 120.05952 * 268.52995 * 18 17 14 20 20 F 1.35096 * 120.04875 * 0.02562 * 19 18 17 21 21 C 1.38335 * 119.90232 * 179.77492 * 19 18 17 22 22 C 1.38258 * 120.02882 * 0.47204 * 21 19 18 23 23 C 1.50703 * 119.93484 * 179.76815 * 22 21 19 24 24 O 1.42899 * 109.47165 * 245.02738 * 23 22 21 25 25 Si 1.86291 * 109.47079 * 5.03106 * 23 22 21 26 26 C 1.38258 * 120.12742 * 359.80137 * 22 21 19 27 27 C 1.38183 * 120.09562 * 359.95109 * 26 22 21 28 28 C 1.53773 * 87.08493 * 25.38869 * 12 11 9 29 29 H 1.08994 * 109.47071 * 299.99563 * 1 2 3 30 30 H 1.09002 * 109.47069 * 59.99952 * 1 2 3 31 31 H 1.09003 * 109.46802 * 179.97438 * 1 2 3 32 32 H 1.08999 * 109.46778 * 180.02562 * 3 2 1 33 33 H 1.08996 * 109.46860 * 300.00582 * 3 2 1 34 34 H 1.09001 * 109.46565 * 60.00531 * 3 2 1 35 35 H 1.09001 * 109.47632 * 299.99695 * 4 2 1 36 36 H 1.09002 * 109.47553 * 59.99995 * 4 2 1 37 37 H 1.09009 * 109.47198 * 179.97438 * 4 2 1 38 38 H 0.96999 * 120.00147 * 0.02562 * 8 6 5 39 39 H 1.08992 * 113.61967 * 334.57206 * 11 9 8 40 40 H 1.08997 * 113.61259 * 203.75112 * 11 9 8 41 41 H 1.07994 * 119.98474 * 180.22933 * 21 19 18 42 42 H 1.09001 * 109.46739 * 125.02900 * 23 22 21 43 43 H 0.96701 * 113.99734 * 180.02562 * 24 23 22 44 44 H 1.48501 * 110.00109 * 299.99518 * 25 23 22 45 45 H 1.48500 * 110.00262 * 61.31611 * 25 23 22 46 46 H 1.07996 * 119.95549 * 179.97438 * 26 22 21 47 47 H 1.07991 * 120.01746 * 180.02562 * 27 26 22 48 48 H 1.08998 * 113.61940 * 89.11782 * 28 12 11 49 49 H 1.09004 * 113.61654 * 220.02252 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6523 -1.9724 1.3382 7 8 0.9516 -2.5098 0.5034 8 7 2.0681 -2.6658 2.4164 9 6 1.6740 -4.0670 2.5830 10 1 1.4198 -4.5511 1.6400 11 6 2.6476 -4.8817 3.4509 12 6 1.8086 -4.4482 4.6645 13 1 2.1386 -3.5101 5.1109 14 16 1.5659 -5.7654 5.8879 15 8 0.8368 -6.8450 5.3203 16 8 2.7629 -5.9937 6.6189 17 8 0.6113 -5.1638 6.9094 18 6 1.1893 -4.2532 7.7372 19 6 1.7328 -4.6607 8.9488 20 9 1.6884 -5.9628 9.3063 21 6 2.3243 -3.7322 9.7865 22 6 2.3654 -2.3990 9.4223 23 6 3.0056 -1.3885 10.3388 24 8 2.0130 -0.4726 10.8055 25 14 3.7729 -2.2663 11.7917 26 6 1.8197 -1.9912 8.2192 27 6 1.2322 -2.9151 7.3761 28 6 0.6287 -4.2861 3.6917 29 1 -0.3633 0.5137 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4425 -0.0005 33 1 1.6766 1.9563 -0.8899 34 1 1.6767 1.9562 0.8901 35 1 1.6767 -1.7489 -1.2494 36 1 1.6766 -0.2073 -2.1393 37 1 3.1301 -0.7208 -1.2496 38 1 2.6278 -2.2370 3.0826 39 1 3.6629 -4.4853 3.4579 40 1 2.6132 -5.9537 3.2568 41 1 2.7506 -4.0481 10.7271 42 1 3.7769 -0.8426 9.7954 43 1 2.3549 0.2078 11.4015 44 1 2.7317 -3.0145 12.5409 45 1 4.8291 -3.1986 11.3220 46 1 1.8530 -0.9491 7.9376 47 1 0.8068 -2.5952 6.4365 48 1 0.0411 -5.1950 3.5626 49 1 0.0141 -3.4086 3.8932 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_7834718_17701012.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:17:34 Heat of formation + Delta-G solvation = -187.020564 kcal Electronic energy + Delta-G solvation = -37671.367904 eV Core-core repulsion = 32416.733777 eV Total energy + Delta-G solvation = -5254.634127 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.128 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -50.22749 -42.26356 -41.98813 -40.54920 -40.04759 -38.39645 -37.87705 -37.63647 -37.26338 -35.36856 -34.09782 -32.87753 -32.01495 -28.40003 -28.35582 -27.55111 -27.38185 -27.20708 -24.73631 -23.94853 -23.57570 -22.00772 -21.33515 -21.02229 -19.77753 -19.48309 -19.06935 -18.92211 -18.66794 -18.40177 -17.94706 -17.61484 -17.18075 -17.00450 -16.77698 -16.69112 -16.29085 -15.95971 -15.75687 -15.55463 -15.51837 -15.40254 -15.20373 -14.73862 -14.47666 -14.36354 -14.31134 -14.20252 -14.08078 -14.06734 -13.68761 -13.48163 -13.45463 -13.36624 -13.25087 -13.20478 -12.96843 -12.93937 -12.90347 -12.59121 -12.42598 -12.41877 -12.29937 -12.20378 -12.16019 -11.50532 -11.38496 -11.08487 -10.69061 -10.50354 -10.41797 -10.09812 -5.17485 -1.28801 -0.48557 -0.35687 0.76891 0.99270 1.01800 1.46483 1.72135 1.77461 1.83621 2.33623 2.51699 2.54083 2.71184 2.88560 2.91540 2.98462 3.21725 3.25477 3.41330 3.45770 3.55122 3.64015 3.68303 3.69884 3.75717 3.89679 4.06602 4.10500 4.14355 4.24066 4.26480 4.33550 4.40539 4.45105 4.47013 4.49982 4.52575 4.56559 4.65849 4.69655 4.71722 4.82502 4.83582 4.86285 5.01474 5.12906 5.27655 5.29842 5.36542 5.48407 6.23637 6.34162 7.27697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.185 4.185 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.560 6.560 8 N -0.696 5.696 9 C 0.154 3.846 10 H 0.124 0.876 11 C -0.111 4.111 12 C -0.655 4.655 13 H 0.155 0.845 14 S 2.593 3.407 15 O -0.912 6.912 16 O -0.943 6.943 17 O -0.652 6.652 18 C 0.036 3.964 19 C 0.143 3.857 20 F -0.112 7.112 21 C -0.145 4.145 22 C -0.027 4.027 23 C -0.076 4.076 24 O -0.542 6.542 25 Si 0.681 3.319 26 C -0.082 4.082 27 C -0.101 4.101 28 C -0.123 4.123 29 H 0.060 0.940 30 H 0.073 0.927 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.083 0.917 34 H 0.067 0.933 35 H 0.087 0.913 36 H 0.073 0.927 37 H 0.060 0.940 38 H 0.407 0.593 39 H 0.102 0.898 40 H 0.114 0.886 41 H 0.148 0.852 42 H 0.088 0.912 43 H 0.389 0.611 44 H -0.246 1.246 45 H -0.248 1.248 46 H 0.154 0.846 47 H 0.156 0.844 48 H 0.119 0.881 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.222 9.617 1.539 10.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.278 6.278 6 C 0.407 3.593 7 O -0.448 6.448 8 N -0.355 5.355 9 C 0.048 3.952 10 H 0.141 0.859 11 C -0.151 4.151 12 C -0.762 4.762 13 H 0.173 0.827 14 S 2.688 3.312 15 O -0.910 6.910 16 O -0.942 6.942 17 O -0.610 6.610 18 C -0.006 4.006 19 C 0.122 3.878 20 F -0.091 7.091 21 C -0.163 4.163 22 C -0.028 4.028 23 C -0.186 4.186 24 O -0.349 6.349 25 Si 0.582 3.418 26 C -0.100 4.100 27 C -0.120 4.120 28 C -0.162 4.162 29 H 0.079 0.921 30 H 0.092 0.908 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.102 0.898 34 H 0.086 0.914 35 H 0.106 0.894 36 H 0.092 0.908 37 H 0.079 0.921 38 H 0.242 0.758 39 H 0.120 0.880 40 H 0.132 0.868 41 H 0.165 0.835 42 H 0.105 0.895 43 H 0.237 0.763 44 H -0.170 1.170 45 H -0.172 1.172 46 H 0.172 0.828 47 H 0.174 0.826 48 H 0.137 0.863 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 3.469 7.518 1.403 8.398 hybrid contribution -0.004 0.368 -0.499 0.620 sum 3.465 7.885 0.904 8.660 Atomic orbital electron populations 1.22530 0.93749 1.05100 1.02810 1.22154 0.94495 0.91556 0.81736 1.21884 1.02361 0.92263 1.03406 1.22533 1.01655 1.03468 0.96550 1.86304 1.71455 1.23182 1.46907 1.18039 0.78633 0.80748 0.81857 1.90942 1.40560 1.70325 1.42981 1.44286 1.55607 1.11585 1.24002 1.21635 0.94093 0.79850 0.99653 0.85865 1.23026 0.99492 1.02204 0.90332 1.32372 1.08847 1.20548 1.14424 0.82678 1.05718 0.73845 0.76233 0.75430 1.93675 1.70881 1.48119 1.78323 1.93670 1.49286 1.84356 1.66858 1.85765 1.59565 1.61117 1.54594 1.18016 1.03290 0.88057 0.91279 1.17509 0.98074 0.79498 0.92746 1.91602 1.93842 1.32358 1.91251 1.20948 1.02157 0.92743 1.00465 1.19408 0.96362 0.92165 0.94823 1.24665 0.94527 0.95330 1.04084 1.86475 1.35116 1.44831 1.68502 0.95032 0.81264 0.83807 0.81746 1.20998 0.96140 1.00442 0.92437 1.21371 0.98955 0.89599 1.02118 1.23300 0.94479 1.05511 0.92935 0.92098 0.90821 0.89391 0.91361 0.89841 0.91379 0.89395 0.90825 0.92066 0.75772 0.87976 0.86780 0.83521 0.89462 0.76281 1.17046 1.17237 0.82824 0.82621 0.86298 0.88630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.08 8.37 37.16 0.31 0.23 16 2 C 0.14 0.04 1.13 -90.62 -0.10 -0.06 16 3 C -0.14 0.23 8.85 37.16 0.33 0.56 16 4 C -0.18 -0.10 8.37 37.16 0.31 0.22 16 5 O -0.36 -0.39 9.94 -40.33 -0.40 -0.79 16 6 C 0.65 0.91 8.06 54.05 0.44 1.35 16 7 O -0.56 -2.17 11.48 -19.28 -0.22 -2.39 16 8 N -0.70 1.16 5.27 -57.84 -0.30 0.86 16 9 C 0.15 -0.30 4.33 -67.03 -0.29 -0.59 16 10 H 0.12 -0.12 7.46 -51.93 -0.39 -0.51 16 11 C -0.11 0.34 7.41 -25.92 -0.19 0.15 16 12 C -0.65 1.62 3.71 -25.92 -0.10 1.52 16 13 H 0.16 -0.80 6.32 -51.92 -0.33 -1.13 16 14 S 2.59 5.63 5.09 -107.50 -0.55 5.08 16 15 O -0.91 -4.66 17.42 -67.04 -1.17 -5.83 16 16 O -0.94 -4.44 16.12 -67.04 -1.08 -5.52 16 17 O -0.65 -1.78 9.92 -51.94 -0.52 -2.30 16 18 C 0.04 0.08 4.78 -39.18 -0.19 -0.11 16 19 C 0.14 0.52 6.53 -39.30 -0.26 0.26 16 20 F -0.11 -0.63 16.85 2.25 0.04 -0.59 16 21 C -0.14 -0.24 8.64 -39.54 -0.34 -0.59 16 22 C -0.03 0.01 5.38 -104.61 -0.56 -0.55 16 23 C -0.08 0.22 2.79 36.01 0.10 0.32 16 24 O -0.54 1.50 12.81 -35.23 -0.45 1.05 16 25 Si 0.68 -1.93 29.85 -169.99 -5.07 -7.00 16 26 C -0.08 0.16 9.68 -39.59 -0.38 -0.22 16 27 C -0.10 0.15 8.47 -39.44 -0.33 -0.18 16 28 C -0.12 0.28 7.45 -25.83 -0.19 0.08 16 29 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 0.22 5.88 -51.93 -0.31 -0.09 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 34 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.09 0.23 5.88 -51.93 -0.31 -0.08 16 36 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.06 0.02 8.14 -51.92 -0.42 -0.41 16 38 H 0.41 -1.61 8.81 -40.82 -0.36 -1.97 16 39 H 0.10 -0.45 8.14 -51.93 -0.42 -0.88 16 40 H 0.11 -0.41 8.10 -51.93 -0.42 -0.83 16 41 H 0.15 0.15 4.86 -52.49 -0.26 -0.10 16 42 H 0.09 -0.46 7.96 -51.93 -0.41 -0.88 16 43 H 0.39 -2.94 8.74 45.56 0.40 -2.55 16 44 H -0.25 -0.12 7.05 56.52 0.40 0.27 16 45 H -0.25 0.04 7.11 56.52 0.40 0.44 16 46 H 0.15 -0.69 8.06 -52.49 -0.42 -1.12 16 47 H 0.16 -0.76 7.24 -52.49 -0.38 -1.14 16 48 H 0.12 -0.24 7.54 -51.93 -0.39 -0.63 16 49 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 LS Contribution 413.00 15.07 6.22 6.22 Total: 0.00 -12.71 413.00 -11.53 -24.24 By element: Atomic # 1 Polarization: -8.84 SS G_CDS: -6.58 Total: -15.41 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: -1.45 Total: 2.39 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.30 Total: 0.86 kcal Atomic # 8 Polarization: -11.95 SS G_CDS: -3.84 Total: -15.78 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.04 Total: -0.59 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: -5.07 Total: -7.00 kcal Atomic # 16 Polarization: 5.63 SS G_CDS: -0.55 Total: 5.08 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -12.71 -11.53 -24.24 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_7834718_17701012.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -162.779 kcal (2) G-P(sol) polarization free energy of solvation -12.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.530 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.241 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.021 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds