Wall clock time and date at job start Sat Mar 6 2021 00:25:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53001 * 109.46828 * 2 1 4 4 C 1.52997 * 109.47033 * 240.00334 * 2 1 3 5 5 O 1.45195 * 109.47294 * 119.99901 * 2 1 3 6 6 C 1.34637 * 116.99883 * 60.00399 * 5 2 1 7 7 O 1.21506 * 120.00142 * 359.97438 * 6 5 2 8 8 N 1.34773 * 120.00030 * 179.97438 * 6 5 2 9 9 C 1.46498 * 120.00401 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.84764 * 23.79962 * 9 8 6 11 11 C 1.53778 * 113.61878 * 154.99695 * 9 8 6 12 12 C 1.53786 * 87.08283 * 139.98336 * 11 9 8 13 13 H 1.08997 * 113.61483 * 89.20077 * 12 11 9 14 14 S 1.81400 * 113.61514 * 220.02141 * 12 11 9 15 15 O 1.42102 * 110.54094 * 71.67870 * 14 12 11 16 16 O 1.42096 * 110.54299 * 294.92941 * 14 12 11 17 17 O 1.52201 * 104.44804 * 183.30279 * 14 12 11 18 18 C 1.35926 * 114.00017 * 284.07242 * 17 14 12 19 19 C 1.38820 * 120.05073 * 271.00627 * 18 17 14 20 20 Cl 1.73597 * 120.02875 * 0.02562 * 19 18 17 21 21 C 1.38256 * 119.94651 * 180.29244 * 19 18 17 22 22 C 1.38235 * 120.05521 * 359.43530 * 21 19 18 23 23 C 1.50705 * 119.94529 * 180.25259 * 22 21 19 24 24 O 1.42899 * 109.46656 * 255.12979 * 23 22 21 25 25 Si 1.86299 * 109.47386 * 15.13077 * 23 22 21 26 26 C 1.38385 * 120.10671 * 0.26804 * 22 21 19 27 27 Cl 1.73597 * 119.97742 * 180.02562 * 26 22 21 28 28 C 1.38264 * 120.05045 * 0.02660 * 26 22 21 29 29 C 1.53780 * 113.61614 * 252.50086 * 9 8 6 30 30 H 1.08997 * 109.46999 * 299.99684 * 1 2 3 31 31 H 1.09000 * 109.47088 * 60.00158 * 1 2 3 32 32 H 1.08998 * 109.46659 * 179.97438 * 1 2 3 33 33 H 1.09005 * 109.47201 * 180.02562 * 3 2 1 34 34 H 1.09000 * 109.47157 * 299.99800 * 3 2 1 35 35 H 1.08999 * 109.47507 * 60.00056 * 3 2 1 36 36 H 1.08998 * 109.47250 * 299.99457 * 4 2 1 37 37 H 1.09000 * 109.47585 * 59.99812 * 4 2 1 38 38 H 1.09005 * 109.47150 * 179.97438 * 4 2 1 39 39 H 0.97000 * 119.99928 * 359.97438 * 8 6 5 40 40 H 1.09000 * 113.61205 * 25.43842 * 11 9 8 41 41 H 1.08996 * 113.69491 * 254.53924 * 11 9 8 42 42 H 1.07998 * 119.97321 * 179.70380 * 21 19 18 43 43 H 1.08995 * 109.46866 * 135.13114 * 23 22 21 44 44 H 0.96697 * 114.00112 * 60.00382 * 24 23 22 45 45 H 1.48508 * 109.99944 * 63.82382 * 25 23 22 46 46 H 1.48498 * 109.99874 * 185.14583 * 25 23 22 47 47 H 1.08005 * 120.02909 * 179.97438 * 28 26 22 48 48 H 1.08998 * 113.62028 * 105.46875 * 29 9 8 49 49 H 1.09003 * 113.60986 * 334.56025 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0141 -0.6844 1.1855 6 6 1.6524 -1.9723 1.3382 7 8 0.9511 -2.5094 0.5040 8 7 2.0682 -2.6657 2.4165 9 6 1.6743 -4.0668 2.5831 10 1 1.4211 -4.5503 1.6396 11 6 2.6478 -4.8816 3.4509 12 6 1.4105 -5.5543 4.0687 13 1 1.0850 -6.4458 3.5328 14 16 1.5441 -5.8177 5.8585 15 8 1.4470 -4.5817 6.5530 16 8 2.5829 -6.7422 6.1502 17 8 0.2672 -6.5582 6.2297 18 6 -0.8378 -5.7679 6.2719 19 6 -1.1849 -5.1205 7.4499 20 17 -0.2074 -5.3190 8.8707 21 6 -2.3127 -4.3220 7.4921 22 6 -3.0881 -4.1586 6.3594 23 6 -4.3138 -3.2830 6.4067 24 8 -5.4839 -4.1029 6.4337 25 14 -4.2620 -2.2241 7.9386 26 6 -2.7408 -4.7979 5.1823 27 17 -3.7166 -4.5899 3.7617 28 6 -1.6172 -5.6024 5.1368 29 6 0.6287 -4.2854 3.6893 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3632 -1.0277 -0.0005 33 1 3.1300 1.4426 -0.0005 34 1 1.6767 1.9563 -0.8900 35 1 1.6767 1.9564 0.8900 36 1 1.6768 -1.7488 -1.2493 37 1 1.6767 -0.2074 -2.1393 38 1 3.1301 -0.7208 -1.2495 39 1 2.6284 -2.2370 3.0824 40 1 3.2141 -4.2756 4.1582 41 1 3.2768 -5.5646 2.8802 42 1 -2.5858 -3.8220 8.4096 43 1 -4.3381 -2.6441 5.5240 44 1 -5.5293 -4.6986 7.1941 45 1 -3.0998 -1.3015 7.8792 46 1 -5.5215 -1.4472 8.0619 47 1 -1.3468 -6.1016 4.2180 48 1 -0.3730 -4.4870 3.3098 49 1 0.6431 -3.5165 4.4618 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_7874538_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:25:52 Heat of formation + Delta-G solvation = -157.263202 kcal Electronic energy + Delta-G solvation = -40652.002421 eV Core-core repulsion = 35148.513061 eV Total energy + Delta-G solvation = -5503.489360 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.059 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.60194 -41.95223 -40.41930 -40.23743 -38.54911 -38.10534 -37.94956 -37.72989 -37.44904 -37.22721 -35.43916 -34.21941 -32.78268 -31.97730 -28.39325 -28.33509 -27.40127 -27.22385 -27.09973 -24.69737 -23.93746 -23.55493 -22.06183 -21.54139 -20.90375 -19.93195 -19.38387 -19.16891 -18.93362 -18.50702 -18.06576 -17.44260 -17.25093 -17.10678 -16.93836 -16.63993 -16.25842 -16.14571 -15.89861 -15.60868 -15.45036 -15.37030 -15.08934 -14.93644 -14.58956 -14.49235 -14.29949 -14.08928 -13.94580 -13.86778 -13.72029 -13.53671 -13.44046 -13.36359 -13.27976 -13.18991 -13.15193 -12.94395 -12.90046 -12.89502 -12.66699 -12.58300 -12.32989 -12.29716 -12.24086 -12.16126 -12.06716 -11.94961 -11.47154 -11.42144 -11.15526 -10.59723 -10.55209 -10.27047 -9.97564 -5.05749 -1.36672 -0.57899 -0.47698 0.55372 0.59864 0.99316 1.11347 1.15926 1.61752 1.66595 1.75358 1.95051 2.26138 2.50062 2.87782 2.98239 3.05947 3.12213 3.20021 3.38654 3.39970 3.46986 3.62974 3.65195 3.70986 3.76778 3.91399 3.93141 4.05575 4.18009 4.25749 4.31142 4.33319 4.39345 4.49706 4.54077 4.57932 4.58615 4.64244 4.65823 4.71820 4.73968 4.79937 4.84748 4.88181 4.98029 5.08905 5.22524 5.24435 5.33435 5.53540 6.30708 6.71972 7.26791 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.128 3.872 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.646 3.354 7 O -0.588 6.588 8 N -0.695 5.695 9 C 0.156 3.844 10 H 0.130 0.870 11 C -0.114 4.114 12 C -0.626 4.626 13 H 0.197 0.803 14 S 2.587 3.413 15 O -0.951 6.951 16 O -0.957 6.957 17 O -0.657 6.657 18 C 0.081 3.919 19 C -0.020 4.020 20 Cl -0.034 7.034 21 C -0.073 4.073 22 C -0.077 4.077 23 C -0.073 4.073 24 O -0.538 6.538 25 Si 0.759 3.241 26 C -0.003 4.003 27 Cl -0.029 7.029 28 C -0.100 4.100 29 C -0.137 4.137 30 H 0.060 0.940 31 H 0.085 0.915 32 H 0.067 0.933 33 H 0.069 0.931 34 H 0.098 0.902 35 H 0.068 0.932 36 H 0.066 0.934 37 H 0.085 0.915 38 H 0.061 0.939 39 H 0.418 0.582 40 H 0.109 0.891 41 H 0.123 0.877 42 H 0.186 0.814 43 H 0.119 0.881 44 H 0.398 0.602 45 H -0.278 1.278 46 H -0.286 1.286 47 H 0.187 0.813 48 H 0.108 0.892 49 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.689 1.764 -0.421 2.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.092 3.908 3 C -0.196 4.196 4 C -0.238 4.238 5 O -0.285 6.285 6 C 0.400 3.600 7 O -0.478 6.478 8 N -0.354 5.354 9 C 0.051 3.949 10 H 0.148 0.852 11 C -0.153 4.153 12 C -0.736 4.736 13 H 0.214 0.786 14 S 2.686 3.314 15 O -0.949 6.949 16 O -0.955 6.955 17 O -0.616 6.616 18 C 0.038 3.962 19 C -0.049 4.049 20 Cl -0.005 7.005 21 C -0.091 4.091 22 C -0.079 4.079 23 C -0.183 4.183 24 O -0.346 6.346 25 Si 0.662 3.338 26 C -0.031 4.031 27 Cl 0.000 7.000 28 C -0.121 4.121 29 C -0.176 4.176 30 H 0.079 0.921 31 H 0.104 0.896 32 H 0.086 0.914 33 H 0.088 0.912 34 H 0.116 0.884 35 H 0.087 0.913 36 H 0.085 0.915 37 H 0.104 0.896 38 H 0.081 0.919 39 H 0.256 0.744 40 H 0.128 0.872 41 H 0.141 0.859 42 H 0.202 0.798 43 H 0.137 0.863 44 H 0.249 0.751 45 H -0.204 1.204 46 H -0.213 1.213 47 H 0.204 0.796 48 H 0.126 0.874 49 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -1.888 2.466 -0.374 3.128 hybrid contribution 0.459 -0.226 -0.881 1.019 sum -1.429 2.240 -1.255 2.938 Atomic orbital electron populations 1.22481 0.93998 1.03868 1.03430 1.22338 0.94456 0.92490 0.81523 1.21901 1.02478 0.91072 1.04177 1.22479 1.01657 1.02374 0.97244 1.86322 1.71494 1.23382 1.47261 1.18360 0.78566 0.80785 0.82316 1.90907 1.41904 1.70820 1.44189 1.44775 1.55138 1.12188 1.23315 1.22457 0.94554 0.78714 0.99135 0.85219 1.23220 0.94174 0.98559 0.99343 1.32026 1.08919 1.09367 1.23304 0.78596 1.05760 0.73371 0.73450 0.78793 1.93669 1.84218 1.47096 1.69936 1.93623 1.54133 1.63451 1.84277 1.85746 1.31570 1.55059 1.89199 1.17573 0.88786 0.95567 0.94236 1.21266 0.95441 0.99423 0.88768 1.98449 1.69357 1.96042 1.36609 1.21020 0.91568 0.96867 0.99659 1.20541 0.97951 0.97996 0.91420 1.25234 0.82928 0.97446 1.12664 1.86573 1.38499 1.56900 1.52597 0.94164 0.77868 0.80680 0.81067 1.20578 0.93556 0.98914 0.90025 1.98455 1.69101 1.95810 1.36611 1.21375 0.93385 0.98513 0.98778 1.23621 1.00573 0.93201 1.00254 0.92062 0.89586 0.91436 0.91190 0.88385 0.91285 0.91463 0.89578 0.91948 0.74448 0.87232 0.85863 0.79767 0.86349 0.75128 1.20425 1.21256 0.79604 0.87399 0.87066 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.35 8.37 71.98 0.60 0.25 16 2 C 0.13 0.22 1.13 -10.79 -0.01 0.21 16 3 C -0.14 0.36 8.85 71.98 0.64 1.00 16 4 C -0.18 -0.33 8.37 71.98 0.60 0.27 16 5 O -0.37 -1.45 9.94 -55.46 -0.55 -2.00 16 6 C 0.65 2.63 8.06 129.79 1.05 3.67 16 7 O -0.59 -4.99 11.48 19.82 0.23 -4.77 16 8 N -0.69 1.59 5.36 -567.63 -3.04 -1.46 16 9 C 0.16 -0.81 4.24 45.52 0.19 -0.62 16 10 H 0.13 -0.53 7.46 -2.39 -0.02 -0.55 16 11 C -0.11 0.89 7.42 31.12 0.23 1.12 16 12 C -0.63 4.40 3.76 31.12 0.12 4.52 16 13 H 0.20 -2.59 8.14 -2.39 -0.02 -2.61 16 14 S 2.59 4.78 5.13 -56.49 -0.29 4.49 16 15 O -0.95 -4.34 14.14 -118.57 -1.68 -6.01 16 16 O -0.96 -9.42 18.09 -118.57 -2.15 -11.56 16 17 O -0.66 -1.18 9.52 -61.81 -0.59 -1.77 16 18 C 0.08 -0.03 4.70 22.52 0.11 0.08 16 19 C -0.02 0.00 5.63 22.41 0.13 0.12 16 20 Cl -0.03 -0.12 27.16 -2.72 -0.07 -0.19 16 21 C -0.07 0.35 8.44 22.27 0.19 0.54 16 22 C -0.08 0.35 5.26 -19.83 -0.10 0.24 16 23 C -0.07 0.35 2.09 71.24 0.15 0.50 16 24 O -0.54 2.51 12.83 -148.98 -1.91 0.60 16 25 Si 0.76 -4.29 29.91 68.60 2.05 -2.24 16 26 C 0.00 0.01 6.31 22.31 0.14 0.15 16 27 Cl -0.03 0.05 27.58 -2.72 -0.08 -0.03 16 28 C -0.10 0.44 6.90 22.38 0.15 0.60 16 29 C -0.14 0.87 5.84 31.12 0.18 1.05 16 30 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 31 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 32 H 0.07 0.44 5.88 -2.39 -0.01 0.43 16 33 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 34 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 35 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 36 H 0.07 0.43 5.88 -2.39 -0.01 0.42 16 37 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 38 H 0.06 0.08 8.14 -2.38 -0.02 0.06 16 39 H 0.42 -2.51 8.84 -92.71 -0.82 -3.33 16 40 H 0.11 -1.01 8.08 -2.39 -0.02 -1.03 16 41 H 0.12 -1.30 8.14 -2.39 -0.02 -1.32 16 42 H 0.19 -1.89 5.12 -2.91 -0.01 -1.91 16 43 H 0.12 -0.39 7.40 -2.39 -0.02 -0.41 16 44 H 0.40 -5.17 8.70 -74.06 -0.64 -5.82 16 45 H -0.28 0.08 7.11 99.48 0.71 0.79 16 46 H -0.29 -0.47 7.11 99.48 0.71 0.24 16 47 H 0.19 -1.87 7.15 -2.91 -0.02 -1.89 16 48 H 0.11 -0.88 6.53 -2.39 -0.02 -0.90 16 49 H 0.11 -0.61 7.37 -2.39 -0.02 -0.63 16 Total: 0.00 -26.76 432.43 -4.09 -30.85 By element: Atomic # 1 Polarization: -19.24 SS G_CDS: -0.38 Total: -19.61 kcal Atomic # 6 Polarization: 9.34 SS G_CDS: 4.36 Total: 13.70 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -3.04 Total: -1.46 kcal Atomic # 8 Polarization: -18.87 SS G_CDS: -6.65 Total: -25.51 kcal Atomic # 14 Polarization: -4.29 SS G_CDS: 2.05 Total: -2.24 kcal Atomic # 16 Polarization: 4.78 SS G_CDS: -0.29 Total: 4.49 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.15 Total: -0.22 kcal Total: -26.76 -4.09 -30.85 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_7874538_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.409 kcal (2) G-P(sol) polarization free energy of solvation -26.762 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.854 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.263 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds