Wall clock time and date at job start Sat Mar 6 2021 00:29:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52999 * 109.46626 * 2 1 4 4 C 1.52997 * 109.47164 * 120.00297 * 2 1 3 5 5 O 1.45202 * 109.46867 * 240.00586 * 2 1 3 6 6 C 1.34628 * 117.00407 * 59.99955 * 5 2 1 7 7 O 1.21513 * 120.00136 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00286 * 179.97438 * 6 5 2 9 9 C 1.46494 * 120.00166 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.85129 * 336.20079 * 9 8 6 11 11 C 1.53782 * 113.61441 * 107.50342 * 9 8 6 12 12 C 1.53779 * 87.08421 * 89.11447 * 11 9 8 13 13 H 1.08994 * 113.69034 * 270.87940 * 12 11 9 14 14 S 1.81396 * 113.61677 * 139.98016 * 12 11 9 15 15 O 1.42098 * 110.54326 * 194.13044 * 14 12 11 16 16 O 1.42099 * 110.54121 * 330.88096 * 14 12 11 17 17 O 1.52202 * 104.44733 * 82.50372 * 14 12 11 18 18 C 1.35922 * 113.99714 * 75.00555 * 17 14 12 19 19 C 1.38816 * 120.05829 * 89.99768 * 18 17 14 20 20 Cl 1.73600 * 120.02239 * 0.02562 * 19 18 17 21 21 C 1.38258 * 119.95193 * 180.02562 * 19 18 17 22 22 C 1.38231 * 120.05371 * 359.97438 * 21 19 18 23 23 C 1.50701 * 119.94206 * 179.97438 * 22 21 19 24 24 O 1.42897 * 109.47541 * 15.00680 * 23 22 21 25 25 Si 1.86304 * 109.46645 * 135.00226 * 23 22 21 26 26 C 1.38390 * 120.10479 * 0.02562 * 22 21 19 27 27 Cl 1.73607 * 119.96957 * 180.02562 * 26 22 21 28 28 C 1.38255 * 120.05419 * 359.72111 * 26 22 21 29 29 C 1.53783 * 113.61453 * 204.99818 * 9 8 6 30 30 H 1.09001 * 109.46801 * 59.99811 * 1 2 3 31 31 H 1.09001 * 109.46998 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.47050 * 299.99699 * 1 2 3 33 33 H 1.09000 * 109.47160 * 60.00369 * 3 2 1 34 34 H 1.09002 * 109.46719 * 180.02562 * 3 2 1 35 35 H 1.08993 * 109.47839 * 299.99931 * 3 2 1 36 36 H 1.09001 * 109.47375 * 59.99966 * 4 2 1 37 37 H 1.09002 * 109.46777 * 180.02562 * 4 2 1 38 38 H 1.09000 * 109.47140 * 299.99948 * 4 2 1 39 39 H 0.97000 * 119.99457 * 359.97438 * 8 6 5 40 40 H 1.09003 * 113.61651 * 203.66710 * 11 9 8 41 41 H 1.09007 * 113.61408 * 334.56946 * 11 9 8 42 42 H 1.07999 * 119.97205 * 180.02562 * 21 19 18 43 43 H 1.08992 * 109.47576 * 254.99992 * 23 22 21 44 44 H 0.96698 * 114.00105 * 179.97438 * 24 23 22 45 45 H 1.48500 * 110.00101 * 178.67803 * 25 23 22 46 46 H 1.48502 * 110.00032 * 300.00181 * 25 23 22 47 47 H 1.08003 * 120.03217 * 180.30009 * 28 26 22 48 48 H 1.08991 * 113.61406 * 25.43707 * 29 9 8 49 49 H 1.08999 * 113.60993 * 156.33837 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7213 1.2492 5 8 2.0140 -0.6844 -1.1857 6 6 1.6523 -0.1727 -2.3772 7 8 0.9509 0.8184 -2.4252 8 7 2.0681 -0.7598 -3.5170 9 6 1.6740 -0.2034 -4.8136 10 1 0.7592 0.3869 -4.7605 11 6 2.8217 0.5012 -5.5561 12 6 3.1503 -0.8645 -6.1820 13 1 3.8470 -1.4602 -5.5924 14 16 3.6121 -0.7688 -7.9336 15 8 3.5847 -2.0593 -8.5277 16 8 2.9762 0.3384 -8.5572 17 8 5.0872 -0.3942 -7.9174 18 6 5.9138 -1.4178 -7.5760 19 6 6.4284 -2.2531 -8.5581 20 17 6.0173 -1.9910 -10.2242 21 6 7.2685 -3.2939 -8.2083 22 6 7.5967 -3.5028 -6.8818 23 6 8.5122 -4.6385 -6.5033 24 8 9.1763 -5.1246 -7.6714 25 14 9.7770 -4.0337 -5.2763 26 6 7.0849 -2.6715 -5.9009 27 17 7.4999 -2.9367 -4.2362 28 6 6.2486 -1.6262 -6.2463 29 6 1.6756 -1.2360 -5.9532 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 1.6766 1.9563 0.8900 34 1 3.1300 1.4425 -0.0005 35 1 1.6767 1.9564 -0.8899 36 1 1.6767 -1.7490 1.2492 37 1 3.1301 -0.7209 1.2493 38 1 1.6767 -0.2075 2.1392 39 1 2.6282 -1.5508 -3.4787 40 1 2.4833 1.2431 -6.2795 41 1 3.6027 0.8780 -4.8956 42 1 7.6694 -3.9437 -8.9721 43 1 7.9280 -5.4427 -6.0563 44 1 9.7835 -5.8580 -7.5022 45 1 10.6663 -5.1517 -4.8707 46 1 10.5803 -2.9369 -5.8738 47 1 5.8533 -0.9746 -5.4810 48 1 1.5313 -2.2615 -5.6134 49 1 1.0239 -0.9690 -6.7851 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_7874538_17701012.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:29:14 Heat of formation + Delta-G solvation = -162.939071 kcal Electronic energy + Delta-G solvation = -40066.228519 eV Core-core repulsion = 34562.493035 eV Total energy + Delta-G solvation = -5503.735484 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.059 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.56710 -41.93945 -40.42787 -40.25333 -38.52972 -38.31627 -38.04828 -37.85735 -37.46624 -37.32428 -35.33280 -33.98735 -32.69725 -32.20127 -28.33154 -28.26399 -27.46149 -27.29296 -27.02882 -24.68048 -23.94521 -23.59339 -22.02821 -21.27421 -20.88862 -19.75348 -19.55852 -19.13131 -18.96908 -18.44300 -17.86077 -17.58902 -17.31491 -17.13558 -16.91191 -16.68968 -16.50253 -16.17202 -15.75564 -15.51894 -15.38131 -15.18582 -15.10343 -14.96518 -14.58817 -14.38324 -14.24443 -14.11880 -14.08541 -14.01097 -13.89761 -13.80405 -13.51158 -13.40882 -13.31415 -13.29563 -13.11045 -12.92455 -12.88878 -12.82849 -12.66798 -12.51561 -12.42759 -12.34197 -12.27823 -12.12878 -11.98998 -11.95014 -11.41917 -11.35726 -11.10712 -11.03601 -10.29034 -10.25829 -9.86182 -4.73391 -1.33749 -0.62337 -0.44792 0.37661 0.56138 0.91256 1.09648 1.11614 1.49102 1.73218 1.80069 1.97385 2.38418 2.56370 2.78900 2.81611 2.98229 3.11036 3.14050 3.34650 3.43390 3.47249 3.68651 3.77247 3.77619 3.83264 3.97962 4.01772 4.06804 4.26413 4.34724 4.38289 4.41891 4.46718 4.52025 4.57286 4.64758 4.65181 4.67878 4.74557 4.79731 4.80805 4.85512 4.91973 4.93118 5.02695 5.15575 5.29482 5.31015 5.39658 5.60656 6.38386 6.52036 7.34349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C 0.130 3.870 3 C -0.181 4.181 4 C -0.138 4.138 5 O -0.364 6.364 6 C 0.648 3.352 7 O -0.590 6.590 8 N -0.680 5.680 9 C 0.151 3.849 10 H 0.111 0.889 11 C -0.127 4.127 12 C -0.628 4.628 13 H 0.189 0.811 14 S 2.579 3.421 15 O -0.961 6.961 16 O -0.953 6.953 17 O -0.658 6.658 18 C 0.068 3.932 19 C -0.024 4.024 20 Cl -0.045 7.045 21 C -0.069 4.069 22 C -0.032 4.032 23 C -0.074 4.074 24 O -0.557 6.557 25 Si 0.651 3.349 26 C -0.034 4.034 27 Cl 0.078 6.922 28 C -0.089 4.089 29 C -0.110 4.110 30 H 0.064 0.936 31 H 0.062 0.938 32 H 0.083 0.917 33 H 0.083 0.917 34 H 0.065 0.935 35 H 0.065 0.935 36 H 0.070 0.930 37 H 0.072 0.928 38 H 0.095 0.905 39 H 0.421 0.579 40 H 0.114 0.886 41 H 0.111 0.889 42 H 0.166 0.834 43 H 0.126 0.874 44 H 0.404 0.596 45 H -0.259 1.259 46 H -0.296 1.296 47 H 0.204 0.796 48 H 0.125 0.875 49 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.437 -5.074 9.807 11.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.239 4.239 2 C 0.094 3.906 3 C -0.239 4.239 4 C -0.195 4.195 5 O -0.278 6.278 6 C 0.401 3.599 7 O -0.481 6.481 8 N -0.340 5.340 9 C 0.044 3.956 10 H 0.129 0.871 11 C -0.166 4.166 12 C -0.739 4.739 13 H 0.206 0.794 14 S 2.679 3.321 15 O -0.959 6.959 16 O -0.951 6.951 17 O -0.616 6.616 18 C 0.025 3.975 19 C -0.053 4.053 20 Cl -0.015 7.015 21 C -0.088 4.088 22 C -0.034 4.034 23 C -0.183 4.183 24 O -0.367 6.367 25 Si 0.553 3.447 26 C -0.061 4.061 27 Cl 0.107 6.893 28 C -0.109 4.109 29 C -0.149 4.149 30 H 0.083 0.917 31 H 0.081 0.919 32 H 0.102 0.898 33 H 0.102 0.898 34 H 0.084 0.916 35 H 0.083 0.917 36 H 0.089 0.911 37 H 0.091 0.909 38 H 0.113 0.887 39 H 0.259 0.741 40 H 0.132 0.868 41 H 0.129 0.871 42 H 0.184 0.816 43 H 0.143 0.857 44 H 0.256 0.744 45 H -0.184 1.184 46 H -0.223 1.223 47 H 0.221 0.779 48 H 0.144 0.856 49 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 1.602 -3.825 8.960 9.873 hybrid contribution 0.634 -0.817 -1.013 1.448 sum 2.236 -4.643 7.947 9.472 Atomic orbital electron populations 1.22495 0.94252 1.02954 1.04245 1.22320 0.94266 0.92456 0.81580 1.22484 1.01836 0.95300 1.04235 1.21891 1.02629 1.01229 0.93773 1.86305 1.71362 1.56447 1.13707 1.18281 0.78472 0.81338 0.81767 1.90937 1.41965 1.27843 1.87320 1.44195 1.55153 1.32930 1.01753 1.21580 0.98555 0.95310 0.80109 0.87094 1.23367 1.00657 0.92277 1.00313 1.32260 1.09746 1.09508 1.22374 0.79392 1.05958 0.73183 0.73716 0.79219 1.93662 1.83793 1.42923 1.75560 1.93623 1.72964 1.54129 1.74364 1.85746 1.39222 1.48485 1.88165 1.17643 0.98946 0.88055 0.92865 1.21454 0.99601 0.97569 0.86668 1.98434 1.92197 1.95879 1.15021 1.20870 0.95089 0.95524 0.97297 1.19498 0.95922 0.96132 0.91876 1.24822 1.00433 0.98018 0.95010 1.86394 1.62315 1.56520 1.31484 0.93682 0.81399 0.80937 0.88692 1.20339 1.01031 0.97174 0.87593 1.98328 1.83765 1.94363 1.12849 1.21363 0.97966 0.97565 0.93998 1.23169 0.89151 1.03292 0.99338 0.91671 0.91876 0.89769 0.89828 0.91608 0.91651 0.91121 0.90875 0.88672 0.74070 0.86811 0.87074 0.81641 0.85672 0.74425 1.18361 1.22267 0.77930 0.85640 0.86534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.06 8.37 71.98 0.60 0.55 16 2 C 0.13 -0.11 1.13 -10.79 -0.01 -0.12 16 3 C -0.18 0.04 8.37 71.98 0.60 0.64 16 4 C -0.14 0.76 8.85 71.98 0.64 1.39 16 5 O -0.36 -0.06 9.94 -55.38 -0.55 -0.61 16 6 C 0.65 0.76 8.06 129.79 1.05 1.81 16 7 O -0.59 -4.36 11.48 19.80 0.23 -4.13 16 8 N -0.68 4.17 5.27 -567.62 -2.99 1.18 16 9 C 0.15 -0.91 4.32 45.52 0.20 -0.71 16 10 H 0.11 -0.32 7.46 -2.39 -0.02 -0.33 16 11 C -0.13 0.85 7.44 31.12 0.23 1.08 16 12 C -0.63 4.98 3.91 31.12 0.12 5.10 16 13 H 0.19 -2.87 6.13 -2.39 -0.01 -2.89 16 14 S 2.58 7.18 5.12 -56.49 -0.29 6.89 16 15 O -0.96 -6.84 15.18 -118.57 -1.80 -8.64 16 16 O -0.95 -9.65 17.27 -118.57 -2.05 -11.70 16 17 O -0.66 -2.09 9.51 -61.77 -0.59 -2.68 16 18 C 0.07 0.08 4.79 22.52 0.11 0.18 16 19 C -0.02 -0.11 5.66 22.41 0.13 0.02 16 20 Cl -0.04 -0.39 27.26 -2.72 -0.07 -0.47 16 21 C -0.07 -0.11 9.14 22.27 0.20 0.10 16 22 C -0.03 0.08 5.16 -19.83 -0.10 -0.02 16 23 C -0.07 0.37 2.86 71.24 0.20 0.58 16 24 O -0.56 1.61 11.48 -148.98 -1.71 -0.10 16 25 Si 0.65 -1.96 27.59 68.60 1.89 -0.06 16 26 C -0.03 0.22 5.89 22.31 0.13 0.35 16 27 Cl 0.08 -0.84 23.27 -2.72 -0.06 -0.91 16 28 C -0.09 0.59 8.28 22.38 0.19 0.77 16 29 C -0.11 0.97 7.42 31.12 0.23 1.20 16 30 H 0.06 0.36 5.88 -2.39 -0.01 0.34 16 31 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 32 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 33 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 34 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 35 H 0.06 0.33 5.88 -2.39 -0.01 0.31 16 36 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 37 H 0.07 -0.45 8.14 -2.39 -0.02 -0.47 16 38 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 39 H 0.42 -5.06 8.81 -92.71 -0.82 -5.87 16 40 H 0.11 -0.55 7.43 -2.39 -0.02 -0.56 16 41 H 0.11 -1.04 8.14 -2.38 -0.02 -1.06 16 42 H 0.17 0.24 7.13 -2.91 -0.02 0.22 16 43 H 0.13 -1.32 7.96 -2.39 -0.02 -1.34 16 44 H 0.40 -4.16 8.74 -74.06 -0.65 -4.81 16 45 H -0.26 -0.11 7.11 99.48 0.71 0.60 16 46 H -0.30 -1.81 7.11 99.48 0.71 -1.10 16 47 H 0.20 -3.06 7.28 -2.91 -0.02 -3.08 16 48 H 0.13 -1.61 8.14 -2.39 -0.02 -1.63 16 49 H 0.12 -1.05 8.10 -2.39 -0.02 -1.07 16 Total: 0.00 -28.99 431.31 -3.86 -32.86 By element: Atomic # 1 Polarization: -24.16 SS G_CDS: -0.38 Total: -24.54 kcal Atomic # 6 Polarization: 8.41 SS G_CDS: 4.51 Total: 12.92 kcal Atomic # 7 Polarization: 4.17 SS G_CDS: -2.99 Total: 1.18 kcal Atomic # 8 Polarization: -21.40 SS G_CDS: -6.47 Total: -27.87 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: 1.89 Total: -0.06 kcal Atomic # 16 Polarization: 7.18 SS G_CDS: -0.29 Total: 6.89 kcal Atomic # 17 Polarization: -1.23 SS G_CDS: -0.14 Total: -1.37 kcal Total: -28.99 -3.86 -32.86 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_7874538_17701012.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.084 kcal (2) G-P(sol) polarization free energy of solvation -28.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.078 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.939 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds