Wall clock time and date at job start Sat Mar 6 2021 00:35:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.53000 * 109.46888 * 2 1 4 4 C 1.52997 * 109.47121 * 240.00361 * 2 1 3 5 5 O 1.45199 * 109.47133 * 119.99722 * 2 1 3 6 6 C 1.34643 * 116.99600 * 60.00427 * 5 2 1 7 7 O 1.21502 * 120.00031 * 359.97438 * 6 5 2 8 8 N 1.34771 * 119.99579 * 179.97438 * 6 5 2 9 9 C 1.46504 * 119.99903 * 180.02562 * 8 6 5 10 10 H 1.08994 * 112.85022 * 23.80278 * 9 8 6 11 11 C 1.53781 * 113.61384 * 155.00238 * 9 8 6 12 12 C 1.53784 * 87.08290 * 139.97942 * 11 9 8 13 13 H 1.09000 * 113.61379 * 89.19541 * 12 11 9 14 14 S 1.81397 * 113.61479 * 220.01567 * 12 11 9 15 15 O 1.42105 * 110.54275 * 68.37257 * 14 12 11 16 16 O 1.42101 * 110.54298 * 291.62360 * 14 12 11 17 17 O 1.52200 * 104.44908 * 179.97438 * 14 12 11 18 18 C 1.35900 * 113.99669 * 75.00458 * 17 14 12 19 19 C 1.38738 * 120.05303 * 269.72595 * 18 17 14 20 20 C 1.38144 * 119.94274 * 179.74795 * 19 18 17 21 21 C 1.38263 * 120.05643 * 0.50461 * 20 19 18 22 22 C 1.50702 * 119.94626 * 179.75060 * 21 20 19 23 23 O 1.42897 * 109.47033 * 245.02226 * 22 21 20 24 24 Si 1.86305 * 109.46852 * 5.01647 * 22 21 20 25 25 C 1.38264 * 120.11045 * 359.76678 * 21 20 19 26 26 C 1.38147 * 120.05859 * 359.97438 * 25 21 20 27 27 C 1.53785 * 87.07941 * 334.56456 * 12 11 9 28 28 H 1.08998 * 109.47098 * 299.99744 * 1 2 3 29 29 H 1.08996 * 109.47123 * 60.00189 * 1 2 3 30 30 H 1.08999 * 109.46964 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47387 * 180.02562 * 3 2 1 32 32 H 1.09004 * 109.46919 * 300.00097 * 3 2 1 33 33 H 1.08998 * 109.47038 * 59.99665 * 3 2 1 34 34 H 1.09007 * 109.47232 * 299.99670 * 4 2 1 35 35 H 1.08996 * 109.47571 * 59.99724 * 4 2 1 36 36 H 1.09003 * 109.47233 * 180.02562 * 4 2 1 37 37 H 0.97002 * 120.00297 * 359.97438 * 8 6 5 38 38 H 1.09001 * 113.61912 * 25.42469 * 11 9 8 39 39 H 1.09007 * 113.60997 * 254.52698 * 11 9 8 40 40 H 1.07995 * 120.02757 * 359.97438 * 19 18 17 41 41 H 1.07994 * 119.97046 * 180.22824 * 20 19 18 42 42 H 1.08992 * 109.47293 * 125.01873 * 22 21 20 43 43 H 0.96699 * 114.00238 * 59.98935 * 23 22 21 44 44 H 1.48498 * 109.99993 * 58.68703 * 24 22 21 45 45 H 1.48502 * 109.99775 * 180.02562 * 24 22 21 46 46 H 1.07998 * 119.97380 * 180.02562 * 25 21 20 47 47 H 1.07996 * 120.02868 * 180.02562 * 26 25 21 48 48 H 1.08995 * 113.61364 * 139.98123 * 27 12 11 49 49 H 1.08999 * 113.61221 * 270.88722 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0141 -0.6844 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9511 -2.5094 0.5040 8 7 2.0681 -2.6656 2.4166 9 6 1.6750 -4.0672 2.5826 10 1 1.4227 -4.5506 1.6388 11 6 2.6487 -4.8814 3.4508 12 6 1.4116 -5.5551 4.0677 13 1 1.0870 -6.4468 3.5314 14 16 1.5445 -5.8188 5.8575 15 8 1.5225 -4.5768 6.5476 16 8 2.5320 -6.7993 6.1451 17 8 0.2308 -6.4845 6.2419 18 6 0.1469 -7.7917 5.8799 19 6 -0.3736 -8.1377 4.6413 20 6 -0.4530 -9.4669 4.2737 21 6 -0.0239 -10.4527 5.1430 22 6 -0.1168 -11.9023 4.7416 23 8 -1.0423 -12.5752 5.5976 24 14 -0.7031 -12.0217 2.9772 25 6 0.4901 -10.1108 6.3802 26 6 0.5766 -8.7827 6.7505 27 6 0.6291 -4.2867 3.6884 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4426 -0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.6766 1.9563 0.8899 34 1 1.6768 -1.7489 -1.2493 35 1 1.6767 -0.2074 -2.1392 36 1 3.1301 -0.7216 -1.2491 37 1 2.6283 -2.2370 3.0825 38 1 3.2143 -4.2752 4.1584 39 1 3.2778 -5.5636 2.8789 40 1 -0.7131 -7.3683 3.9637 41 1 -0.8547 -9.7365 3.3081 42 1 0.8648 -12.3676 4.8305 43 1 -1.9385 -12.2132 5.5697 44 1 0.2341 -11.2986 2.0806 45 1 -0.7996 -13.4463 2.5694 46 1 0.8250 -10.8826 7.0574 47 1 0.9785 -8.5161 7.7168 48 1 -0.3723 -4.4888 3.3083 49 1 0.6426 -3.5180 4.4610 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_79476_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:35:25 Heat of formation + Delta-G solvation = -150.986352 kcal Electronic energy + Delta-G solvation = -34315.980540 eV Core-core repulsion = 29532.362950 eV Total energy + Delta-G solvation = -4783.617590 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.137 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.31656 -41.88560 -40.44817 -39.94288 -38.36768 -37.86815 -37.51255 -37.24634 -35.35736 -34.19945 -32.54280 -32.28582 -28.34967 -28.31586 -27.42433 -27.24416 -27.01244 -24.46978 -23.75567 -23.41499 -21.87174 -21.47258 -20.88640 -19.63120 -19.17861 -19.12093 -18.79198 -18.42994 -17.66854 -17.17017 -17.14782 -16.89070 -16.79847 -16.35838 -16.06062 -16.03557 -15.60689 -15.50167 -15.33741 -15.01626 -14.56291 -14.46980 -14.38385 -14.33920 -14.18045 -14.04888 -13.79935 -13.52727 -13.38594 -13.38203 -13.33079 -13.19164 -13.15049 -12.99257 -12.87383 -12.85363 -12.54752 -12.49398 -12.29106 -12.27144 -12.19388 -11.97688 -11.53185 -11.33424 -11.02772 -10.65160 -10.37512 -10.33105 -10.09714 -5.18974 -1.19647 -0.21837 -0.04591 0.88549 1.10703 1.12165 1.48285 1.78129 1.84559 2.18310 2.37109 2.53668 2.73723 2.99441 3.09247 3.25297 3.26551 3.32287 3.39824 3.45604 3.55095 3.74811 3.80763 3.82439 3.94426 3.94644 4.03371 4.09385 4.13510 4.25212 4.31249 4.38744 4.49463 4.54209 4.57159 4.60100 4.60935 4.62842 4.75723 4.76289 4.81412 4.87447 4.90438 4.97329 5.06051 5.12137 5.16862 5.33396 5.40616 5.50039 5.54593 6.31422 6.39884 7.33926 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.653 3.347 7 O -0.565 6.565 8 N -0.705 5.705 9 C 0.157 3.843 10 H 0.132 0.868 11 C -0.113 4.113 12 C -0.650 4.650 13 H 0.160 0.840 14 S 2.601 3.399 15 O -0.918 6.918 16 O -0.944 6.944 17 O -0.659 6.659 18 C 0.068 3.932 19 C -0.125 4.125 20 C -0.099 4.099 21 C -0.102 4.102 22 C -0.072 4.072 23 O -0.536 6.536 24 Si 0.686 3.314 25 C -0.073 4.073 26 C -0.087 4.087 27 C -0.125 4.125 28 H 0.061 0.939 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.068 0.932 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.410 0.590 38 H 0.101 0.899 39 H 0.104 0.896 40 H 0.147 0.853 41 H 0.143 0.857 42 H 0.120 0.880 43 H 0.381 0.619 44 H -0.254 1.254 45 H -0.251 1.251 46 H 0.144 0.856 47 H 0.144 0.856 48 H 0.098 0.902 49 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.129 -0.232 -3.063 3.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.406 3.594 7 O -0.454 6.454 8 N -0.363 5.363 9 C 0.052 3.948 10 H 0.149 0.851 11 C -0.152 4.152 12 C -0.757 4.757 13 H 0.178 0.822 14 S 2.696 3.304 15 O -0.916 6.916 16 O -0.943 6.943 17 O -0.618 6.618 18 C 0.027 3.973 19 C -0.145 4.145 20 C -0.117 4.117 21 C -0.103 4.103 22 C -0.183 4.183 23 O -0.341 6.341 24 Si 0.587 3.413 25 C -0.091 4.091 26 C -0.107 4.107 27 C -0.165 4.165 28 H 0.080 0.920 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.087 0.913 34 H 0.105 0.895 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.246 0.754 38 H 0.119 0.881 39 H 0.123 0.877 40 H 0.164 0.836 41 H 0.160 0.840 42 H 0.137 0.863 43 H 0.229 0.771 44 H -0.179 1.179 45 H -0.176 1.176 46 H 0.162 0.838 47 H 0.162 0.838 48 H 0.116 0.884 49 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -1.658 -0.900 -3.468 3.948 hybrid contribution 0.602 0.474 0.172 0.785 sum -1.056 -0.426 -3.296 3.487 Atomic orbital electron populations 1.22525 0.93781 1.05042 1.02799 1.22143 0.94496 0.91603 0.81775 1.21883 1.02367 0.92298 1.03400 1.22524 1.01635 1.03402 0.96568 1.86323 1.71386 1.23301 1.46786 1.18127 0.78574 0.80724 0.81925 1.90913 1.40811 1.70437 1.43229 1.44751 1.55677 1.11913 1.23998 1.22417 0.94092 0.79198 0.99101 0.85070 1.23066 0.94244 0.98468 0.99443 1.32132 1.08067 1.08070 1.27408 0.82184 1.05420 0.73230 0.74815 0.76977 1.93666 1.84356 1.44358 1.69247 1.93668 1.59567 1.58676 1.82372 1.85732 1.63161 1.30519 1.82374 1.18099 1.05737 0.78007 0.95450 1.21304 1.00074 0.97976 0.95111 1.20897 0.99688 0.91531 0.99557 1.20636 0.98363 0.96395 0.94927 1.25136 0.97323 0.89356 1.06439 1.86542 1.22766 1.58257 1.66575 0.94846 0.89799 0.82604 0.74025 1.21023 0.96840 0.95290 0.95967 1.21420 0.97098 0.92194 0.99969 1.23336 0.99980 0.92999 1.00140 0.92041 0.90893 0.89437 0.91367 0.89895 0.91327 0.89464 0.90877 0.92095 0.75428 0.88096 0.87715 0.83572 0.83961 0.86267 0.77147 1.17883 1.17586 0.83821 0.83804 0.88364 0.87070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.17 8.37 37.16 0.31 0.15 16 2 C 0.14 0.13 1.13 -90.62 -0.10 0.03 16 3 C -0.14 0.13 8.85 37.16 0.33 0.46 16 4 C -0.18 -0.16 8.37 37.16 0.31 0.15 16 5 O -0.36 -0.73 9.94 -40.33 -0.40 -1.14 16 6 C 0.65 1.37 8.06 54.05 0.44 1.81 16 7 O -0.57 -2.29 11.48 -19.27 -0.22 -2.51 16 8 N -0.70 0.49 5.36 -57.93 -0.31 0.18 16 9 C 0.16 -0.30 4.24 -67.11 -0.28 -0.58 16 10 H 0.13 -0.20 7.46 -51.93 -0.39 -0.59 16 11 C -0.11 0.34 7.42 -25.92 -0.19 0.15 16 12 C -0.65 1.73 4.03 -25.91 -0.10 1.63 16 13 H 0.16 -0.79 6.13 -51.93 -0.32 -1.11 16 14 S 2.60 2.47 5.13 -107.50 -0.55 1.92 16 15 O -0.92 -3.61 17.27 -67.04 -1.16 -4.76 16 16 O -0.94 -3.06 16.26 -67.03 -1.09 -4.15 16 17 O -0.66 -0.67 10.05 -51.75 -0.52 -1.19 16 18 C 0.07 0.02 4.79 -39.22 -0.19 -0.17 16 19 C -0.12 0.28 8.50 -39.43 -0.34 -0.05 16 20 C -0.10 0.28 8.66 -39.61 -0.34 -0.06 16 21 C -0.10 0.18 5.35 -104.60 -0.56 -0.38 16 22 C -0.07 0.15 2.80 36.01 0.10 0.25 16 23 O -0.54 0.82 12.83 -35.23 -0.45 0.37 16 24 Si 0.69 -1.97 29.80 -169.99 -5.07 -7.03 16 25 C -0.07 0.06 9.68 -39.61 -0.38 -0.32 16 26 C -0.09 -0.04 9.05 -39.43 -0.36 -0.39 16 27 C -0.12 0.29 7.44 -25.91 -0.19 0.10 16 28 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 29 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.09 0.24 5.88 -51.93 -0.31 -0.06 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 34 H 0.09 0.24 5.88 -51.92 -0.31 -0.07 16 35 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.41 -1.03 8.84 -40.82 -0.36 -1.39 16 38 H 0.10 -0.39 8.08 -51.93 -0.42 -0.81 16 39 H 0.10 -0.44 8.14 -51.92 -0.42 -0.86 16 40 H 0.15 -0.75 7.28 -52.49 -0.38 -1.14 16 41 H 0.14 -0.77 4.90 -52.49 -0.26 -1.02 16 42 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 43 H 0.38 -2.06 8.70 45.56 0.40 -1.67 16 44 H -0.25 0.20 7.11 56.52 0.40 0.60 16 45 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 46 H 0.14 -0.27 8.06 -52.49 -0.42 -0.69 16 47 H 0.14 -0.03 8.06 -52.49 -0.42 -0.45 16 48 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 49 H 0.11 -0.20 7.43 -51.93 -0.39 -0.58 16 LS Contribution 407.03 15.07 6.13 6.13 Total: 0.00 -11.49 407.03 -12.18 -23.67 By element: Atomic # 1 Polarization: -7.27 SS G_CDS: -6.99 Total: -14.26 kcal Atomic # 6 Polarization: 4.32 SS G_CDS: -1.56 Total: 2.77 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -0.31 Total: 0.18 kcal Atomic # 8 Polarization: -9.54 SS G_CDS: -3.84 Total: -13.38 kcal Atomic # 14 Polarization: -1.97 SS G_CDS: -5.07 Total: -7.03 kcal Atomic # 16 Polarization: 2.47 SS G_CDS: -0.55 Total: 1.92 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -11.49 -12.18 -23.67 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_79476_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.315 kcal (2) G-P(sol) polarization free energy of solvation -11.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.808 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.671 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds