Wall clock time and date at job start Sat Mar 6 2021 00:05:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52998 * 109.47319 * 2 1 4 4 C 1.53000 * 109.46993 * 239.99943 * 2 1 3 5 5 O 1.45201 * 109.46978 * 120.00055 * 2 1 3 6 6 C 1.34634 * 116.99818 * 59.99497 * 5 2 1 7 7 O 1.21507 * 120.00189 * 359.72959 * 6 5 2 8 8 N 1.34784 * 119.99829 * 180.02562 * 6 5 2 9 9 C 1.46499 * 119.99893 * 179.72952 * 8 6 5 10 10 H 1.08994 * 112.84864 * 334.66269 * 9 8 6 11 11 C 1.53777 * 113.61575 * 105.86345 * 9 8 6 12 12 C 1.53959 * 87.01997 * 139.94563 * 11 9 8 13 13 H 1.09008 * 113.53195 * 89.18765 * 12 11 9 14 14 S 1.81395 * 113.74396 * 220.05510 * 12 11 9 15 15 O 1.42089 * 110.54376 * 34.22546 * 14 12 11 16 16 O 1.42109 * 110.54053 * 170.97597 * 14 12 11 17 17 O 1.52200 * 104.45000 * 282.59722 * 14 12 11 18 18 C 1.36000 * 113.99631 * 75.00215 * 17 14 12 19 19 C 1.38889 * 120.03681 * 90.00379 * 18 17 14 20 20 F 1.35102 * 120.03650 * 359.97438 * 19 18 17 21 21 C 1.38339 * 119.93008 * 179.97438 * 19 18 17 22 22 C 1.50697 * 119.99533 * 180.02562 * 21 19 18 23 23 O 1.42901 * 109.47352 * 330.00366 * 22 21 19 24 24 Si 1.86300 * 109.47218 * 209.99777 * 22 21 19 25 25 C 1.38438 * 120.00557 * 359.97438 * 21 19 18 26 26 F 1.35100 * 119.95998 * 180.02562 * 25 21 19 27 27 C 1.38451 * 120.07440 * 359.97438 * 25 21 19 28 28 C 1.38189 * 120.07377 * 359.75232 * 27 25 21 29 29 C 1.53783 * 87.11183 * 334.63851 * 12 11 9 30 30 H 1.09001 * 109.46839 * 300.00340 * 1 2 3 31 31 H 1.09003 * 109.46834 * 59.99616 * 1 2 3 32 32 H 1.08998 * 109.47606 * 179.97438 * 1 2 3 33 33 H 1.09001 * 109.46982 * 179.97438 * 3 2 1 34 34 H 1.09004 * 109.46956 * 299.99984 * 3 2 1 35 35 H 1.09001 * 109.47443 * 60.00029 * 3 2 1 36 36 H 1.09002 * 109.47011 * 300.00143 * 4 2 1 37 37 H 1.08994 * 109.47249 * 60.00026 * 4 2 1 38 38 H 1.09001 * 109.47037 * 180.02562 * 4 2 1 39 39 H 0.97005 * 119.99846 * 359.72740 * 8 6 5 40 40 H 1.08999 * 113.61570 * 254.52801 * 11 9 8 41 41 H 1.09000 * 113.61420 * 25.43288 * 11 9 8 42 42 H 1.09003 * 109.46889 * 90.00161 * 22 21 19 43 43 H 0.96701 * 113.99702 * 180.02562 * 23 22 21 44 44 H 1.48505 * 109.99827 * 60.00271 * 24 22 21 45 45 H 1.48501 * 109.99946 * 181.32265 * 24 22 21 46 46 H 1.08002 * 119.96468 * 180.02562 * 27 25 21 47 47 H 1.07991 * 120.00703 * 180.25109 * 28 27 25 48 48 H 1.08996 * 113.61272 * 270.80989 * 29 12 11 49 49 H 1.08997 * 113.68993 * 139.91651 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6521 -1.9723 1.3383 7 8 0.9470 -2.5080 0.5063 8 7 2.0670 -2.6654 2.4172 9 6 1.6684 -4.0649 2.5865 10 1 0.7379 -4.3051 2.0723 11 6 2.8019 -5.0663 2.3087 12 6 2.2817 -5.8672 3.5162 13 1 1.5193 -6.6015 3.2556 14 16 3.5977 -6.5571 4.5568 15 8 4.7164 -5.6818 4.5914 16 8 3.0548 -7.0999 5.7527 17 8 4.0947 -7.7713 3.7853 18 6 4.8676 -7.4644 2.7092 19 6 6.2440 -7.3467 2.8527 20 9 6.8166 -7.5363 4.0616 21 6 7.0281 -7.0350 1.7564 22 6 8.5218 -6.9074 1.9103 23 8 8.8278 -6.4577 3.2317 24 14 9.1712 -5.6783 0.6700 25 6 6.4409 -6.8413 0.5178 26 9 7.2076 -6.5375 -0.5523 27 6 5.0689 -6.9597 0.3743 28 6 4.2832 -7.2765 1.4661 29 6 1.7063 -4.5438 4.0474 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3634 -1.0276 -0.0005 33 1 3.1301 1.4424 0.0005 34 1 1.6767 1.9563 -0.8900 35 1 1.6768 1.9564 0.8900 36 1 1.6766 -1.7489 -1.2492 37 1 1.6767 -0.2075 -2.1392 38 1 3.1300 -0.7217 -1.2490 39 1 2.6297 -2.2376 3.0816 40 1 2.6985 -5.5903 1.3585 41 1 3.7983 -4.6501 2.4574 42 1 8.9888 -7.8774 1.7394 43 1 9.7739 -6.3525 3.4021 44 1 8.5421 -4.3516 0.8924 45 1 10.6471 -5.5672 0.7900 46 1 4.6127 -6.8087 -0.5929 47 1 3.2137 -7.3726 1.3521 48 1 2.4025 -3.9845 4.6723 49 1 0.7196 -4.6453 4.4993 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_9576490_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:05:01 Heat of formation + Delta-G solvation = -226.851398 kcal Electronic energy + Delta-G solvation = -41615.882395 eV Core-core repulsion = 35890.067099 eV Total energy + Delta-G solvation = -5725.815297 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.118 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -50.98851 -50.10685 -42.30376 -41.89961 -40.49881 -39.67822 -38.39439 -37.90818 -37.78565 -37.27306 -35.38250 -34.23773 -33.20181 -31.30472 -28.36963 -28.33708 -27.97093 -27.26284 -27.04392 -25.00208 -23.85224 -23.45637 -21.98968 -21.60664 -20.95838 -19.92209 -19.73429 -19.48586 -19.17527 -18.91473 -18.64427 -18.24073 -17.56071 -17.36842 -17.25233 -17.11206 -17.07927 -16.50074 -16.48689 -16.24458 -15.95718 -15.90349 -15.68328 -15.53030 -15.36636 -15.26025 -14.65153 -14.47049 -14.33098 -14.18119 -14.11835 -13.99763 -13.67277 -13.58176 -13.43390 -13.37958 -13.35829 -13.27083 -13.17645 -13.13905 -13.01551 -12.89473 -12.87456 -12.65270 -12.56690 -12.29892 -12.21452 -11.90240 -11.56181 -11.35583 -11.09106 -11.05043 -10.37821 -10.15969 -10.05968 -4.68518 -1.34468 -0.65085 -0.51478 0.73184 1.08932 1.09824 1.54054 1.68864 1.75425 1.91186 2.21649 2.27570 2.49739 2.65317 2.71003 2.74091 3.00326 3.02759 3.06705 3.19285 3.35959 3.40421 3.49696 3.64410 3.72718 3.78693 3.92542 3.96274 4.06457 4.09274 4.17615 4.18733 4.26051 4.28168 4.34480 4.37489 4.41803 4.50333 4.53235 4.57588 4.58908 4.72797 4.74204 4.85267 4.88335 5.03783 5.13500 5.17016 5.31118 5.38079 5.52274 6.28561 6.31470 7.31204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.143 4.143 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.653 3.347 7 O -0.565 6.565 8 N -0.705 5.705 9 C 0.160 3.840 10 H 0.132 0.868 11 C -0.138 4.138 12 C -0.647 4.647 13 H 0.168 0.832 14 S 2.593 3.407 15 O -0.936 6.936 16 O -0.915 6.915 17 O -0.649 6.649 18 C 0.020 3.980 19 C 0.191 3.809 20 F -0.090 7.090 21 C -0.135 4.135 22 C -0.083 4.083 23 O -0.529 6.529 24 Si 0.670 3.330 25 C 0.143 3.857 26 F -0.077 7.077 27 C -0.137 4.137 28 C -0.070 4.070 29 C -0.114 4.114 30 H 0.060 0.940 31 H 0.072 0.928 32 H 0.087 0.913 33 H 0.067 0.933 34 H 0.082 0.918 35 H 0.067 0.933 36 H 0.087 0.913 37 H 0.072 0.928 38 H 0.060 0.940 39 H 0.410 0.590 40 H 0.103 0.897 41 H 0.110 0.890 42 H 0.092 0.908 43 H 0.387 0.613 44 H -0.253 1.253 45 H -0.253 1.253 46 H 0.169 0.831 47 H 0.168 0.832 48 H 0.102 0.898 49 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.960 0.776 -6.518 6.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.200 4.200 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.407 3.593 7 O -0.454 6.454 8 N -0.364 5.364 9 C 0.055 3.945 10 H 0.150 0.850 11 C -0.177 4.177 12 C -0.754 4.754 13 H 0.185 0.815 14 S 2.687 3.313 15 O -0.934 6.934 16 O -0.913 6.913 17 O -0.608 6.608 18 C -0.024 4.024 19 C 0.169 3.831 20 F -0.067 7.067 21 C -0.137 4.137 22 C -0.191 4.191 23 O -0.336 6.336 24 Si 0.569 3.431 25 C 0.122 3.878 26 F -0.055 7.055 27 C -0.156 4.156 28 C -0.089 4.089 29 C -0.153 4.153 30 H 0.079 0.921 31 H 0.091 0.909 32 H 0.106 0.894 33 H 0.086 0.914 34 H 0.101 0.899 35 H 0.086 0.914 36 H 0.106 0.894 37 H 0.091 0.909 38 H 0.079 0.921 39 H 0.246 0.754 40 H 0.121 0.879 41 H 0.128 0.872 42 H 0.110 0.890 43 H 0.235 0.765 44 H -0.177 1.177 45 H -0.179 1.179 46 H 0.187 0.813 47 H 0.185 0.815 48 H 0.120 0.880 49 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -1.126 1.046 -6.401 6.583 hybrid contribution 0.434 0.096 1.334 1.406 sum -0.693 1.143 -5.067 5.240 Atomic orbital electron populations 1.22530 0.93795 1.05048 1.02788 1.22140 0.94461 0.91595 0.81790 1.21887 1.02392 0.92326 1.03389 1.22521 1.01659 1.03392 0.96544 1.86324 1.71410 1.23274 1.46785 1.18127 0.78477 0.80640 0.82088 1.90913 1.40650 1.70619 1.43179 1.44760 1.55321 1.12114 1.24171 1.22389 0.98883 0.77609 0.95609 0.84990 1.23692 1.01144 0.96508 0.96389 1.32165 1.20150 1.09017 1.14046 0.81466 1.05761 0.76306 0.73760 0.75449 1.93700 1.46504 1.67306 1.85907 1.93675 1.80647 1.75789 1.41163 1.85787 1.68460 1.59134 1.47398 1.17993 0.87766 1.10872 0.85727 1.17012 0.88317 0.96022 0.81797 1.91655 1.84292 1.90768 1.40016 1.19357 0.96521 1.06096 0.91750 1.24658 0.92765 1.07426 0.94228 1.86623 1.30184 1.89247 1.27575 0.94738 0.79579 0.79091 0.89703 1.17132 0.89039 0.99402 0.82201 1.90784 1.71912 1.89495 1.53306 1.21025 0.90601 1.02899 1.01057 1.21215 1.02279 0.96277 0.89167 1.23072 1.04011 0.90717 0.97506 0.92097 0.90886 0.89406 0.91353 0.89876 0.91369 0.89430 0.90876 0.92063 0.75419 0.87902 0.87219 0.89006 0.76466 1.17668 1.17863 0.81319 0.81494 0.87961 0.87541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.09 8.37 37.16 0.31 0.22 16 2 C 0.14 0.07 1.13 -90.62 -0.10 -0.03 16 3 C -0.14 0.16 8.85 37.16 0.33 0.49 16 4 C -0.18 -0.05 8.37 37.16 0.31 0.26 16 5 O -0.36 -0.58 9.94 -40.31 -0.40 -0.99 16 6 C 0.65 0.96 8.06 54.06 0.44 1.40 16 7 O -0.56 -1.82 11.50 -19.28 -0.22 -2.04 16 8 N -0.70 0.88 5.37 -57.93 -0.31 0.57 16 9 C 0.16 -0.43 4.21 -67.12 -0.28 -0.71 16 10 H 0.13 -0.32 7.50 -51.93 -0.39 -0.71 16 11 C -0.14 0.47 5.13 -25.83 -0.13 0.34 16 12 C -0.65 2.10 3.98 -25.82 -0.10 1.99 16 13 H 0.17 -1.01 8.14 -51.92 -0.42 -1.44 16 14 S 2.59 3.99 5.15 -107.50 -0.55 3.43 16 15 O -0.94 -3.63 15.28 -67.04 -1.02 -4.65 16 16 O -0.91 -4.80 18.09 -67.04 -1.21 -6.02 16 17 O -0.65 -1.03 9.92 -52.07 -0.52 -1.55 16 18 C 0.02 0.01 4.62 -39.19 -0.18 -0.17 16 19 C 0.19 0.52 6.29 -39.30 -0.25 0.27 16 20 F -0.09 -0.49 14.69 2.25 0.03 -0.46 16 21 C -0.14 -0.10 5.36 -104.51 -0.56 -0.66 16 22 C -0.08 -0.02 2.93 36.00 0.11 0.09 16 23 O -0.53 -1.03 10.80 -35.23 -0.38 -1.41 16 24 Si 0.67 -0.20 28.61 -169.99 -4.86 -5.07 16 25 C 0.14 -0.27 6.73 -39.43 -0.27 -0.54 16 26 F -0.08 0.22 12.43 2.25 0.03 0.25 16 27 C -0.14 0.56 10.02 -39.52 -0.40 0.16 16 28 C -0.07 0.23 6.71 -39.45 -0.26 -0.03 16 29 C -0.11 0.39 7.42 -25.92 -0.19 0.20 16 30 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.09 0.20 5.87 -51.93 -0.30 -0.10 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 35 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.09 0.17 5.89 -51.93 -0.31 -0.13 16 37 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.41 -1.12 8.82 -40.82 -0.36 -1.48 16 40 H 0.10 -0.57 5.99 -51.93 -0.31 -0.88 16 41 H 0.11 -0.29 7.55 -51.93 -0.39 -0.69 16 42 H 0.09 -0.17 7.96 -51.93 -0.41 -0.59 16 43 H 0.39 -0.86 8.74 45.56 0.40 -0.46 16 44 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 45 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 46 H 0.17 -1.22 8.06 -52.49 -0.42 -1.64 16 47 H 0.17 -1.15 6.60 -52.49 -0.35 -1.49 16 48 H 0.10 -0.40 8.07 -51.93 -0.42 -0.82 16 49 H 0.11 -0.49 8.14 -51.93 -0.42 -0.91 16 LS Contribution 408.53 15.07 6.16 6.16 Total: 0.00 -12.78 408.53 -10.77 -23.55 By element: Atomic # 1 Polarization: -8.79 SS G_CDS: -6.27 Total: -15.06 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: -1.24 Total: 3.28 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.31 Total: 0.57 kcal Atomic # 8 Polarization: -12.90 SS G_CDS: -3.76 Total: -16.65 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.06 Total: -0.21 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -4.86 Total: -5.07 kcal Atomic # 16 Polarization: 3.99 SS G_CDS: -0.55 Total: 3.43 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -12.78 -10.77 -23.55 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9576490_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -203.299 kcal (2) G-P(sol) polarization free energy of solvation -12.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.773 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.553 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds