Wall clock time and date at job start Sat Mar 6 2021 00:04:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52998 * 109.47319 * 2 1 4 4 C 1.53000 * 109.46993 * 239.99943 * 2 1 3 5 5 O 1.45201 * 109.46978 * 120.00055 * 2 1 3 6 6 C 1.34634 * 116.99818 * 59.99497 * 5 2 1 7 7 O 1.21507 * 120.00189 * 359.72959 * 6 5 2 8 8 N 1.34784 * 119.99829 * 180.02562 * 6 5 2 9 9 C 1.46499 * 119.99893 * 179.72952 * 8 6 5 10 10 H 1.08994 * 112.84864 * 334.66269 * 9 8 6 11 11 C 1.53777 * 113.61575 * 105.86345 * 9 8 6 12 12 C 1.53959 * 87.01997 * 139.94563 * 11 9 8 13 13 H 1.09008 * 113.53195 * 89.18765 * 12 11 9 14 14 S 1.81395 * 113.74396 * 220.05510 * 12 11 9 15 15 O 1.42089 * 110.54376 * 34.22546 * 14 12 11 16 16 O 1.42109 * 110.54053 * 170.97597 * 14 12 11 17 17 O 1.52200 * 104.45000 * 282.59722 * 14 12 11 18 18 C 1.36000 * 113.99631 * 75.00215 * 17 14 12 19 19 C 1.38889 * 120.03681 * 90.00379 * 18 17 14 20 20 F 1.35102 * 120.03650 * 359.97438 * 19 18 17 21 21 C 1.38339 * 119.93008 * 179.97438 * 19 18 17 22 22 C 1.50697 * 119.99533 * 180.02562 * 21 19 18 23 23 O 1.42901 * 109.47352 * 330.00366 * 22 21 19 24 24 Si 1.86300 * 109.47218 * 209.99777 * 22 21 19 25 25 C 1.38438 * 120.00557 * 359.97438 * 21 19 18 26 26 F 1.35100 * 119.95998 * 180.02562 * 25 21 19 27 27 C 1.38451 * 120.07440 * 359.97438 * 25 21 19 28 28 C 1.38189 * 120.07377 * 359.75232 * 27 25 21 29 29 C 1.53783 * 87.11183 * 334.63851 * 12 11 9 30 30 H 1.09001 * 109.46839 * 300.00340 * 1 2 3 31 31 H 1.09003 * 109.46834 * 59.99616 * 1 2 3 32 32 H 1.08998 * 109.47606 * 179.97438 * 1 2 3 33 33 H 1.09001 * 109.46982 * 179.97438 * 3 2 1 34 34 H 1.09004 * 109.46956 * 299.99984 * 3 2 1 35 35 H 1.09001 * 109.47443 * 60.00029 * 3 2 1 36 36 H 1.09002 * 109.47011 * 300.00143 * 4 2 1 37 37 H 1.08994 * 109.47249 * 60.00026 * 4 2 1 38 38 H 1.09001 * 109.47037 * 180.02562 * 4 2 1 39 39 H 0.97005 * 119.99846 * 359.72740 * 8 6 5 40 40 H 1.08999 * 113.61570 * 254.52801 * 11 9 8 41 41 H 1.09000 * 113.61420 * 25.43288 * 11 9 8 42 42 H 1.09003 * 109.46889 * 90.00161 * 22 21 19 43 43 H 0.96701 * 113.99702 * 180.02562 * 23 22 21 44 44 H 1.48505 * 109.99827 * 60.00271 * 24 22 21 45 45 H 1.48501 * 109.99946 * 181.32265 * 24 22 21 46 46 H 1.08002 * 119.96468 * 180.02562 * 27 25 21 47 47 H 1.07991 * 120.00703 * 180.25109 * 28 27 25 48 48 H 1.08996 * 113.61272 * 270.80989 * 29 12 11 49 49 H 1.08997 * 113.68993 * 139.91651 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6521 -1.9723 1.3383 7 8 0.9470 -2.5080 0.5063 8 7 2.0670 -2.6654 2.4172 9 6 1.6684 -4.0649 2.5865 10 1 0.7379 -4.3051 2.0723 11 6 2.8019 -5.0663 2.3087 12 6 2.2817 -5.8672 3.5162 13 1 1.5193 -6.6015 3.2556 14 16 3.5977 -6.5571 4.5568 15 8 4.7164 -5.6818 4.5914 16 8 3.0548 -7.0999 5.7527 17 8 4.0947 -7.7713 3.7853 18 6 4.8676 -7.4644 2.7092 19 6 6.2440 -7.3467 2.8527 20 9 6.8166 -7.5363 4.0616 21 6 7.0281 -7.0350 1.7564 22 6 8.5218 -6.9074 1.9103 23 8 8.8278 -6.4577 3.2317 24 14 9.1712 -5.6783 0.6700 25 6 6.4409 -6.8413 0.5178 26 9 7.2076 -6.5375 -0.5523 27 6 5.0689 -6.9597 0.3743 28 6 4.2832 -7.2765 1.4661 29 6 1.7063 -4.5438 4.0474 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3634 -1.0276 -0.0005 33 1 3.1301 1.4424 0.0005 34 1 1.6767 1.9563 -0.8900 35 1 1.6768 1.9564 0.8900 36 1 1.6766 -1.7489 -1.2492 37 1 1.6767 -0.2075 -2.1392 38 1 3.1300 -0.7217 -1.2490 39 1 2.6297 -2.2376 3.0816 40 1 2.6985 -5.5903 1.3585 41 1 3.7983 -4.6501 2.4574 42 1 8.9888 -7.8774 1.7394 43 1 9.7739 -6.3525 3.4021 44 1 8.5421 -4.3516 0.8924 45 1 10.6471 -5.5672 0.7900 46 1 4.6127 -6.8087 -0.5929 47 1 3.2137 -7.3726 1.3521 48 1 2.4025 -3.9845 4.6723 49 1 0.7196 -4.6453 4.4993 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_9576490_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:04:59 Heat of formation + Delta-G solvation = -233.065302 kcal Electronic energy + Delta-G solvation = -41616.151851 eV Core-core repulsion = 35890.067099 eV Total energy + Delta-G solvation = -5726.084752 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.118 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -50.80120 -50.26210 -42.27031 -41.89365 -40.35456 -39.60780 -38.56271 -37.92248 -37.80852 -37.44558 -35.38668 -34.17908 -33.09904 -31.19586 -28.33840 -28.29923 -27.82743 -27.10350 -26.89128 -24.94303 -23.79737 -23.37944 -21.95093 -21.50135 -20.89901 -19.90082 -19.65821 -19.45328 -19.16591 -18.92545 -18.66531 -18.22143 -17.53121 -17.32301 -17.20524 -17.05459 -16.96657 -16.59714 -16.43933 -16.18906 -15.94389 -15.91232 -15.62664 -15.51666 -15.35509 -15.21713 -14.55172 -14.44700 -14.20979 -14.18881 -14.13002 -13.87148 -13.63674 -13.60027 -13.45053 -13.42382 -13.34691 -13.25942 -13.11757 -13.07802 -12.89026 -12.85489 -12.82879 -12.69747 -12.53011 -12.27755 -12.03608 -11.97905 -11.42596 -11.37306 -11.10211 -11.06684 -10.28179 -10.06082 -9.98313 -4.71192 -1.33333 -0.55546 -0.40663 0.73175 1.09060 1.16479 1.50858 1.71362 1.82109 1.86069 2.28157 2.39559 2.55667 2.78797 2.80375 2.92282 3.06447 3.16474 3.19006 3.42388 3.56795 3.58507 3.69730 3.75355 3.77949 3.81351 3.95885 4.13052 4.25398 4.30501 4.35740 4.41291 4.44825 4.49642 4.54930 4.56441 4.63730 4.65707 4.68567 4.75160 4.78546 4.79747 4.84768 4.89025 4.93382 5.12728 5.26383 5.29708 5.32516 5.38547 5.57462 6.33983 6.42852 7.30620 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.141 4.141 4 C -0.179 4.179 5 O -0.373 6.373 6 C 0.647 3.353 7 O -0.584 6.584 8 N -0.698 5.698 9 C 0.159 3.841 10 H 0.138 0.862 11 C -0.142 4.142 12 C -0.611 4.611 13 H 0.208 0.792 14 S 2.582 3.418 15 O -0.973 6.973 16 O -0.968 6.968 17 O -0.658 6.658 18 C 0.004 3.996 19 C 0.145 3.855 20 F -0.122 7.122 21 C -0.154 4.154 22 C -0.098 4.098 23 O -0.556 6.556 24 Si 0.749 3.251 25 C 0.142 3.858 26 F -0.067 7.067 27 C -0.113 4.113 28 C -0.059 4.059 29 C -0.121 4.121 30 H 0.058 0.942 31 H 0.085 0.915 32 H 0.069 0.931 33 H 0.067 0.933 34 H 0.098 0.902 35 H 0.066 0.934 36 H 0.071 0.929 37 H 0.085 0.915 38 H 0.061 0.939 39 H 0.415 0.585 40 H 0.136 0.864 41 H 0.101 0.899 42 H 0.110 0.890 43 H 0.398 0.602 44 H -0.302 1.302 45 H -0.277 1.277 46 H 0.215 0.785 47 H 0.212 0.788 48 H 0.102 0.898 49 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.862 0.911 -9.436 9.903 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.198 4.198 4 C -0.237 4.237 5 O -0.288 6.288 6 C 0.401 3.599 7 O -0.474 6.474 8 N -0.357 5.357 9 C 0.054 3.946 10 H 0.156 0.844 11 C -0.181 4.181 12 C -0.723 4.723 13 H 0.225 0.775 14 S 2.683 3.317 15 O -0.971 6.971 16 O -0.966 6.966 17 O -0.617 6.617 18 C -0.039 4.039 19 C 0.123 3.877 20 F -0.100 7.100 21 C -0.156 4.156 22 C -0.205 4.205 23 O -0.366 6.366 24 Si 0.652 3.348 25 C 0.121 3.879 26 F -0.046 7.046 27 C -0.131 4.131 28 C -0.078 4.078 29 C -0.161 4.161 30 H 0.077 0.923 31 H 0.104 0.896 32 H 0.088 0.912 33 H 0.086 0.914 34 H 0.117 0.883 35 H 0.085 0.915 36 H 0.090 0.910 37 H 0.104 0.896 38 H 0.080 0.920 39 H 0.252 0.748 40 H 0.154 0.846 41 H 0.119 0.881 42 H 0.128 0.872 43 H 0.249 0.751 44 H -0.229 1.229 45 H -0.205 1.205 46 H 0.232 0.768 47 H 0.229 0.771 48 H 0.120 0.880 49 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -2.968 1.129 -9.267 9.796 hybrid contribution 1.008 0.137 2.182 2.408 sum -1.960 1.266 -7.085 7.460 Atomic orbital electron populations 1.22482 0.93893 1.03996 1.03368 1.22342 0.94505 0.92374 0.81638 1.21908 1.02360 0.91375 1.04122 1.22472 1.01599 1.02568 0.97012 1.86327 1.71587 1.23554 1.47339 1.18322 0.78478 0.80625 0.82475 1.90897 1.41586 1.70921 1.44005 1.44839 1.54808 1.12566 1.23488 1.22491 0.99317 0.76897 0.95895 0.84421 1.23862 1.00509 0.96287 0.97456 1.31970 1.18231 1.09517 1.12592 0.77498 1.05867 0.76901 0.73277 0.75686 1.93651 1.48979 1.67851 1.86614 1.93601 1.81328 1.76880 1.44765 1.85738 1.68748 1.59067 1.48135 1.18413 0.87104 1.11710 0.86710 1.17520 0.89794 0.98928 0.81414 1.91557 1.84949 1.91552 1.41909 1.19554 0.96606 1.06844 0.92558 1.24977 0.93357 1.08682 0.93483 1.86609 1.31548 1.89471 1.28955 0.94136 0.76740 0.75705 0.88171 1.17293 0.90085 0.99112 0.81389 1.90780 1.71842 1.89314 1.52624 1.21581 0.89255 0.99798 1.02486 1.21785 1.04432 0.94289 0.87285 1.23262 1.05012 0.90249 0.97542 0.92250 0.89572 0.91174 0.91399 0.88325 0.91470 0.90988 0.89587 0.92042 0.74783 0.84638 0.88070 0.87247 0.75087 1.22898 1.20473 0.76843 0.77142 0.87997 0.85785 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.11 8.37 71.98 0.60 0.49 16 2 C 0.13 0.08 1.13 -10.79 -0.01 0.06 16 3 C -0.14 0.43 8.85 71.98 0.64 1.07 16 4 C -0.18 0.02 8.37 71.98 0.60 0.62 16 5 O -0.37 -1.15 9.94 -55.43 -0.55 -1.70 16 6 C 0.65 1.56 8.06 129.79 1.05 2.61 16 7 O -0.58 -3.32 11.50 19.82 0.23 -3.09 16 8 N -0.70 2.29 5.37 -567.61 -3.05 -0.76 16 9 C 0.16 -1.15 4.21 45.52 0.19 -0.96 16 10 H 0.14 -1.06 7.50 -2.39 -0.02 -1.07 16 11 C -0.14 1.31 5.13 31.18 0.16 1.47 16 12 C -0.61 5.05 3.98 31.18 0.12 5.18 16 13 H 0.21 -3.32 8.14 -2.38 -0.02 -3.34 16 14 S 2.58 11.48 5.15 -56.49 -0.29 11.19 16 15 O -0.97 -10.24 15.28 -118.57 -1.81 -12.05 16 16 O -0.97 -12.57 18.09 -118.57 -2.15 -14.71 16 17 O -0.66 -2.85 9.92 -62.65 -0.62 -3.47 16 18 C 0.00 0.01 4.62 22.52 0.10 0.11 16 19 C 0.15 1.08 6.29 22.45 0.14 1.22 16 20 F -0.12 -1.82 14.69 44.97 0.66 -1.16 16 21 C -0.15 -0.38 5.36 -19.79 -0.11 -0.48 16 22 C -0.10 -0.19 2.93 71.23 0.21 0.02 16 23 O -0.56 -3.76 10.80 -148.98 -1.61 -5.37 16 24 Si 0.75 0.24 28.61 68.60 1.96 2.20 16 25 C 0.14 -0.71 6.73 22.37 0.15 -0.56 16 26 F -0.07 0.49 12.43 44.97 0.56 1.05 16 27 C -0.11 1.30 10.02 22.31 0.22 1.52 16 28 C -0.06 0.55 6.71 22.35 0.15 0.70 16 29 C -0.12 0.98 7.42 31.12 0.23 1.22 16 30 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 31 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.07 0.33 5.87 -2.39 -0.01 0.31 16 33 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 34 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 35 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 36 H 0.07 0.25 5.89 -2.39 -0.01 0.24 16 37 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 38 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 39 H 0.42 -2.33 8.82 -92.70 -0.82 -3.14 16 40 H 0.14 -2.13 5.99 -2.39 -0.01 -2.15 16 41 H 0.10 -0.64 7.55 -2.39 -0.02 -0.66 16 42 H 0.11 -0.29 7.96 -2.39 -0.02 -0.31 16 43 H 0.40 -0.67 8.74 -74.06 -0.65 -1.32 16 44 H -0.30 -2.49 7.11 99.48 0.71 -1.78 16 45 H -0.28 -1.06 7.11 99.48 0.71 -0.35 16 46 H 0.21 -4.33 8.06 -2.91 -0.02 -4.35 16 47 H 0.21 -3.96 6.60 -2.92 -0.02 -3.98 16 48 H 0.10 -0.79 8.07 -2.39 -0.02 -0.80 16 49 H 0.12 -1.38 8.14 -2.39 -0.02 -1.40 16 Total: 0.00 -36.73 408.53 -2.60 -39.33 By element: Atomic # 1 Polarization: -25.34 SS G_CDS: -0.39 Total: -25.72 kcal Atomic # 6 Polarization: 9.82 SS G_CDS: 4.45 Total: 14.27 kcal Atomic # 7 Polarization: 2.29 SS G_CDS: -3.05 Total: -0.76 kcal Atomic # 8 Polarization: -33.89 SS G_CDS: -6.51 Total: -40.40 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 1.22 Total: -0.11 kcal Atomic # 14 Polarization: 0.24 SS G_CDS: 1.96 Total: 2.20 kcal Atomic # 16 Polarization: 11.48 SS G_CDS: -0.29 Total: 11.19 kcal Total: -36.73 -2.60 -39.33 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9576490_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -193.737 kcal (2) G-P(sol) polarization free energy of solvation -36.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -230.470 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.596 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.329 kcal (6) G-S(sol) free energy of system = (1) + (5) -233.065 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds