Wall clock time and date at job start Sat Mar 6 2021 00:09:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52998 * 109.47427 * 2 1 4 4 C 1.52997 * 109.47117 * 239.99641 * 2 1 3 5 5 O 1.45206 * 109.47229 * 119.99678 * 2 1 3 6 6 C 1.34639 * 116.99609 * 60.00046 * 5 2 1 7 7 O 1.21513 * 119.99979 * 359.97438 * 6 5 2 8 8 N 1.34776 * 119.99626 * 180.02562 * 6 5 2 9 9 C 1.46503 * 119.99477 * 179.97438 * 8 6 5 10 10 H 1.08996 * 112.85384 * 23.80213 * 9 8 6 11 11 C 1.53786 * 113.61192 * 154.99969 * 9 8 6 12 12 C 1.53782 * 87.08392 * 89.11310 * 11 9 8 13 13 H 1.08997 * 113.61553 * 270.80348 * 12 11 9 14 14 S 1.81398 * 113.61541 * 139.98102 * 12 11 9 15 15 O 1.42093 * 110.54342 * 73.78453 * 14 12 11 16 16 O 1.42102 * 110.54033 * 297.03484 * 14 12 11 17 17 O 1.52197 * 104.44753 * 185.41017 * 14 12 11 18 18 C 1.36004 * 113.99954 * 285.31268 * 17 14 12 19 19 C 1.38882 * 120.03971 * 268.98279 * 18 17 14 20 20 F 1.35100 * 120.03840 * 0.02562 * 19 18 17 21 21 C 1.38336 * 119.92614 * 180.27635 * 19 18 17 22 22 C 1.50700 * 119.99598 * 179.74707 * 21 19 18 23 23 O 1.42905 * 109.47435 * 113.41832 * 22 21 19 24 24 Si 1.86299 * 109.47142 * 233.42314 * 22 21 19 25 25 C 1.38442 * 120.01040 * 359.72517 * 21 19 18 26 26 F 1.35100 * 119.96470 * 179.97438 * 25 21 19 27 27 C 1.38455 * 120.07238 * 359.97438 * 25 21 19 28 28 C 1.38193 * 120.06879 * 0.02562 * 27 25 21 29 29 C 1.53785 * 87.17117 * 25.39006 * 12 11 9 30 30 H 1.09008 * 109.46749 * 300.00503 * 1 2 3 31 31 H 1.08997 * 109.46927 * 60.00112 * 1 2 3 32 32 H 1.08992 * 109.47261 * 180.02562 * 1 2 3 33 33 H 1.09002 * 109.47778 * 179.97438 * 3 2 1 34 34 H 1.09006 * 109.47138 * 300.00057 * 3 2 1 35 35 H 1.09000 * 109.47117 * 59.99579 * 3 2 1 36 36 H 1.08995 * 109.47510 * 300.00221 * 4 2 1 37 37 H 1.08997 * 109.47020 * 60.00304 * 4 2 1 38 38 H 1.09003 * 109.47448 * 179.97438 * 4 2 1 39 39 H 0.96996 * 120.00464 * 359.97438 * 8 6 5 40 40 H 1.09008 * 113.61160 * 334.56547 * 11 9 8 41 41 H 1.08998 * 113.68986 * 203.67476 * 11 9 8 42 42 H 1.09007 * 109.47086 * 353.42264 * 22 21 19 43 43 H 0.96702 * 113.99560 * 59.99881 * 23 22 21 44 44 H 1.48499 * 110.00383 * 63.73242 * 24 22 21 45 45 H 1.48509 * 109.99831 * 185.05382 * 24 22 21 46 46 H 1.07999 * 119.96532 * 180.02562 * 27 25 21 47 47 H 1.07994 * 120.00297 * 179.97438 * 28 27 25 48 48 H 1.09002 * 113.61187 * 89.15589 * 29 12 11 49 49 H 1.09000 * 113.61351 * 220.05934 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9723 1.3384 7 8 0.9509 -2.5094 0.5041 8 7 2.0672 -2.6653 2.4173 9 6 1.6731 -4.0665 2.5837 10 1 1.4207 -4.5502 1.6402 11 6 2.6460 -4.8810 3.4527 12 6 1.8052 -4.4449 4.6643 13 1 2.1353 -3.5067 5.1100 14 16 1.5607 -5.7595 5.8901 15 8 2.7566 -5.9864 6.6231 16 8 0.8324 -6.8403 5.3237 17 8 0.6048 -5.1557 6.9089 18 6 1.1820 -4.2436 7.7363 19 6 1.7316 -4.6510 8.9449 20 9 1.6939 -5.9539 9.2999 21 6 2.3130 -3.7203 9.7872 22 6 2.9048 -4.1599 11.1017 23 8 4.3215 -3.9748 11.0720 24 14 2.1744 -3.1440 12.4821 25 6 2.3518 -2.3854 9.4227 26 9 2.9195 -1.4772 10.2463 27 6 1.8096 -1.9799 8.2150 28 6 1.2280 -2.9069 7.3711 29 6 0.6255 -4.2830 3.6910 30 1 -0.3633 0.5140 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0276 0.0005 33 1 3.1301 1.4425 0.0005 34 1 1.6767 1.9563 -0.8900 35 1 1.6767 1.9563 0.8899 36 1 1.6767 -1.7489 -1.2492 37 1 1.6767 -0.2075 -2.1391 38 1 3.1300 -0.7209 -1.2495 39 1 2.6268 -2.2365 3.0834 40 1 3.6613 -4.4843 3.4604 41 1 2.6119 -5.9534 3.2608 42 1 2.6794 -5.2134 11.2674 43 1 4.5954 -3.0587 10.9279 44 1 0.7145 -3.3969 12.5814 45 1 2.8371 -3.4826 13.7673 46 1 1.8412 -0.9381 7.9322 47 1 0.8050 -2.5894 6.4296 48 1 0.0369 -5.1915 3.5635 49 1 0.0120 -3.4045 3.8908 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_9576490_17701012.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:09:01 Heat of formation + Delta-G solvation = -228.641508 kcal Electronic energy + Delta-G solvation = -40649.200418 eV Core-core repulsion = 34923.307496 eV Total energy + Delta-G solvation = -5725.892922 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.118 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -50.72262 -50.45305 -42.33451 -42.01194 -40.57811 -39.80601 -38.45061 -37.91105 -37.79803 -37.31624 -35.38820 -34.11928 -33.16244 -31.36566 -28.41371 -28.37119 -27.88187 -27.36384 -27.21380 -25.04854 -24.16250 -23.74331 -22.04177 -21.36440 -21.05985 -19.86969 -19.73838 -19.66635 -19.31171 -18.95575 -18.39964 -18.19604 -17.68253 -17.48566 -17.27352 -17.18185 -16.98674 -16.69790 -16.56092 -16.20828 -16.03530 -15.78201 -15.71902 -15.51225 -15.43847 -15.30670 -14.72894 -14.50196 -14.41383 -14.30910 -14.28280 -14.13651 -14.11998 -13.76585 -13.52871 -13.49445 -13.41143 -13.31337 -13.22692 -13.19729 -12.95787 -12.91809 -12.65142 -12.60396 -12.44196 -12.31869 -12.23855 -12.18079 -11.55007 -11.40288 -11.10351 -11.01463 -10.44655 -10.31471 -10.25456 -5.08620 -1.40342 -0.74437 -0.62030 0.66662 0.96864 0.99635 1.45982 1.60781 1.70014 1.84672 2.19936 2.27764 2.46332 2.54652 2.67603 2.79951 2.84977 2.94422 3.08665 3.22337 3.28596 3.30386 3.34824 3.51242 3.68409 3.74243 3.88241 3.92903 4.07012 4.09504 4.11251 4.19510 4.21110 4.25784 4.30474 4.31615 4.43284 4.48161 4.49212 4.52867 4.55265 4.67662 4.70422 4.81147 4.84805 5.00121 5.07508 5.10533 5.28344 5.34843 5.46661 6.21307 6.28618 7.25605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.185 4.185 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.560 6.560 8 N -0.696 5.696 9 C 0.154 3.846 10 H 0.123 0.877 11 C -0.111 4.111 12 C -0.655 4.655 13 H 0.155 0.845 14 S 2.589 3.411 15 O -0.940 6.940 16 O -0.910 6.910 17 O -0.650 6.650 18 C 0.027 3.973 19 C 0.177 3.823 20 F -0.103 7.103 21 C -0.172 4.172 22 C -0.073 4.073 23 O -0.525 6.525 24 Si 0.687 3.313 25 C 0.150 3.850 26 F -0.100 7.100 27 C -0.134 4.134 28 C -0.076 4.076 29 C -0.123 4.123 30 H 0.060 0.940 31 H 0.073 0.927 32 H 0.087 0.913 33 H 0.067 0.933 34 H 0.083 0.917 35 H 0.067 0.933 36 H 0.087 0.913 37 H 0.073 0.927 38 H 0.060 0.940 39 H 0.407 0.593 40 H 0.102 0.898 41 H 0.114 0.886 42 H 0.128 0.872 43 H 0.379 0.621 44 H -0.248 1.248 45 H -0.238 1.238 46 H 0.168 0.832 47 H 0.165 0.835 48 H 0.119 0.881 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.927 9.301 -1.368 9.447 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.278 6.278 6 C 0.407 3.593 7 O -0.448 6.448 8 N -0.355 5.355 9 C 0.048 3.952 10 H 0.141 0.859 11 C -0.151 4.151 12 C -0.762 4.762 13 H 0.173 0.827 14 S 2.685 3.315 15 O -0.938 6.938 16 O -0.908 6.908 17 O -0.608 6.608 18 C -0.016 4.016 19 C 0.155 3.845 20 F -0.081 7.081 21 C -0.175 4.175 22 C -0.182 4.182 23 O -0.330 6.330 24 Si 0.584 3.416 25 C 0.129 3.871 26 F -0.078 7.078 27 C -0.153 4.153 28 C -0.095 4.095 29 C -0.162 4.162 30 H 0.079 0.921 31 H 0.092 0.908 32 H 0.106 0.894 33 H 0.087 0.913 34 H 0.102 0.898 35 H 0.086 0.914 36 H 0.106 0.894 37 H 0.092 0.908 38 H 0.079 0.921 39 H 0.242 0.758 40 H 0.121 0.879 41 H 0.132 0.868 42 H 0.145 0.855 43 H 0.226 0.774 44 H -0.173 1.173 45 H -0.162 1.162 46 H 0.186 0.814 47 H 0.183 0.817 48 H 0.137 0.863 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.007 7.728 -0.604 7.752 hybrid contribution 0.348 -0.059 -0.311 0.470 sum 0.341 7.669 -0.914 7.731 Atomic orbital electron populations 1.22529 0.93743 1.05091 1.02812 1.22154 0.94489 0.91557 0.81724 1.21885 1.02379 0.92251 1.03409 1.22530 1.01671 1.03458 0.96556 1.86305 1.71464 1.23172 1.46907 1.18043 0.78639 0.80755 0.81850 1.90944 1.40506 1.70328 1.43006 1.44289 1.55669 1.11588 1.23965 1.21637 0.94037 0.79871 0.99681 0.85875 1.23035 0.99528 1.02230 0.90273 1.32373 1.08908 1.20423 1.14483 0.82686 1.05832 0.73908 0.76310 0.75494 1.93691 1.49156 1.84288 1.66692 1.93682 1.70893 1.47939 1.78296 1.85805 1.59546 1.60863 1.54627 1.17955 1.03937 0.88165 0.91531 1.17071 0.96520 0.79236 0.91706 1.91607 1.93500 1.31834 1.91166 1.20389 1.04665 0.92207 1.00192 1.25117 0.86387 1.08215 0.98508 1.86620 1.17985 1.33173 1.95261 0.94839 0.79959 0.89458 0.77299 1.17188 0.95505 0.84907 0.89452 1.91394 1.81775 1.65099 1.69549 1.21100 0.99765 1.02066 0.92352 1.21180 0.97422 0.89201 1.01740 1.23311 0.94443 1.05534 0.92939 0.92105 0.90821 0.89391 0.91349 0.89837 0.91381 0.89400 0.90825 0.92055 0.75765 0.87902 0.86755 0.85474 0.77360 1.17255 1.16153 0.81415 0.81747 0.86283 0.88572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.02 8.37 37.16 0.31 0.33 16 2 C 0.14 -0.02 1.13 -90.62 -0.10 -0.12 16 3 C -0.14 0.29 8.85 37.16 0.33 0.62 16 4 C -0.19 -0.02 8.37 37.16 0.31 0.29 16 5 O -0.36 -0.18 9.94 -40.32 -0.40 -0.58 16 6 C 0.65 0.48 8.06 54.05 0.44 0.91 16 7 O -0.56 -1.83 11.48 -19.28 -0.22 -2.05 16 8 N -0.70 1.73 5.27 -57.84 -0.30 1.42 16 9 C 0.15 -0.42 4.33 -67.02 -0.29 -0.71 16 10 H 0.12 -0.21 7.46 -51.93 -0.39 -0.60 16 11 C -0.11 0.43 7.42 -25.92 -0.19 0.24 16 12 C -0.65 2.37 3.69 -25.92 -0.10 2.28 16 13 H 0.16 -1.02 6.30 -51.93 -0.33 -1.35 16 14 S 2.59 2.67 5.09 -107.50 -0.55 2.13 16 15 O -0.94 -3.55 16.07 -67.04 -1.08 -4.63 16 16 O -0.91 -3.80 17.42 -67.04 -1.17 -4.96 16 17 O -0.65 -0.70 9.92 -52.08 -0.52 -1.21 16 18 C 0.03 0.00 4.80 -39.20 -0.19 -0.19 16 19 C 0.18 0.33 6.46 -39.31 -0.25 0.07 16 20 F -0.10 -0.43 15.75 2.25 0.04 -0.40 16 21 C -0.17 0.03 4.65 -104.51 -0.49 -0.46 16 22 C -0.07 -0.02 2.78 36.01 0.10 0.08 16 23 O -0.53 -0.34 12.88 -35.23 -0.45 -0.79 16 24 Si 0.69 -0.63 30.28 -169.99 -5.15 -5.78 16 25 C 0.15 -0.45 6.52 -39.43 -0.26 -0.71 16 26 F -0.10 0.43 13.52 2.25 0.03 0.46 16 27 C -0.13 0.67 10.02 -39.52 -0.40 0.28 16 28 C -0.08 0.31 8.47 -39.45 -0.33 -0.02 16 29 C -0.12 0.41 7.45 -25.82 -0.19 0.22 16 30 H 0.06 -0.03 8.14 -51.92 -0.42 -0.45 16 31 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 32 H 0.09 0.17 5.88 -51.93 -0.31 -0.13 16 33 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 35 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 36 H 0.09 0.19 5.88 -51.93 -0.31 -0.11 16 37 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 39 H 0.41 -1.98 8.81 -40.82 -0.36 -2.34 16 40 H 0.10 -0.53 8.14 -51.92 -0.42 -0.95 16 41 H 0.11 -0.49 8.10 -51.93 -0.42 -0.91 16 42 H 0.13 0.15 6.98 -51.92 -0.36 -0.21 16 43 H 0.38 -1.27 7.59 45.56 0.35 -0.92 16 44 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 45 H -0.24 -0.40 7.11 56.52 0.40 0.00 16 46 H 0.17 -1.38 8.06 -52.49 -0.42 -1.81 16 47 H 0.17 -1.25 7.23 -52.49 -0.38 -1.63 16 48 H 0.12 -0.36 7.54 -51.93 -0.39 -0.75 16 49 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 LS Contribution 416.31 15.07 6.27 6.27 Total: 0.00 -12.10 416.31 -11.12 -23.22 By element: Atomic # 1 Polarization: -9.87 SS G_CDS: -6.32 Total: -16.19 kcal Atomic # 6 Polarization: 4.39 SS G_CDS: -1.30 Total: 3.09 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -0.30 Total: 1.42 kcal Atomic # 8 Polarization: -10.39 SS G_CDS: -3.84 Total: -14.23 kcal Atomic # 9 Polarization: -0.01 SS G_CDS: 0.07 Total: 0.06 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.15 Total: -5.78 kcal Atomic # 16 Polarization: 2.67 SS G_CDS: -0.55 Total: 2.13 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -12.10 -11.12 -23.22 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9576490_17701012.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -205.420 kcal (2) G-P(sol) polarization free energy of solvation -12.104 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -217.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.221 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.642 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds