Wall clock time and date at job start Sat Mar 6 2021 00:21:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35965 * 117.00220 * 2 1 4 4 C 1.38904 * 120.06275 * 179.97438 * 3 2 1 5 5 F 1.35103 * 120.04832 * 0.02562 * 4 3 2 6 6 C 1.38338 * 119.90065 * 179.97438 * 4 3 2 7 7 C 1.38253 * 120.03068 * 0.02562 * 6 4 3 8 8 C 1.50697 * 119.93624 * 179.97438 * 7 6 4 9 9 H 1.09002 * 112.84772 * 348.81355 * 8 7 6 10 10 C 1.53788 * 113.61119 * 120.00081 * 8 7 6 11 11 C 1.53785 * 87.07877 * 139.98474 * 10 8 7 12 12 H 1.08996 * 113.61557 * 219.93866 * 11 10 8 13 13 N 1.46498 * 113.61330 * 89.11723 * 11 10 8 14 14 S 1.65602 * 119.99711 * 145.00259 * 13 11 10 15 15 O 1.42101 * 106.40161 * 311.45547 * 14 13 11 16 16 O 1.42101 * 106.40003 * 178.53852 * 14 13 11 17 17 C 1.76200 * 107.22180 * 64.99709 * 14 13 11 18 18 C 1.38233 * 119.99834 * 89.99827 * 17 14 13 19 19 C 1.38234 * 120.00312 * 179.97438 * 18 17 14 20 20 C 1.38234 * 119.99400 * 359.97438 * 19 18 17 21 21 C 1.50707 * 119.99907 * 179.97438 * 20 19 18 22 22 O 1.42903 * 109.46442 * 65.00146 * 21 20 19 23 23 Si 1.86293 * 109.47256 * 184.99713 * 21 20 19 24 24 C 1.38236 * 120.00404 * 0.27380 * 20 19 18 25 25 C 1.38229 * 119.99922 * 269.98076 * 17 14 13 26 26 C 1.53783 * 113.61761 * 217.49883 * 8 7 6 27 27 C 1.38258 * 120.12531 * 0.23878 * 7 6 4 28 28 C 1.38182 * 120.09644 * 359.47821 * 27 7 6 29 29 H 1.08999 * 109.47347 * 300.00074 * 1 2 3 30 30 H 1.08997 * 109.47418 * 60.00171 * 1 2 3 31 31 H 1.08995 * 109.47301 * 180.02562 * 1 2 3 32 32 H 1.08001 * 119.97794 * 180.02562 * 6 4 3 33 33 H 1.09000 * 113.60960 * 25.43527 * 10 8 7 34 34 H 1.09000 * 113.61512 * 254.53192 * 10 8 7 35 35 H 0.97001 * 119.99928 * 324.99743 * 13 11 10 36 36 H 1.08010 * 120.00188 * 359.97438 * 18 17 14 37 37 H 1.07999 * 120.00412 * 180.02562 * 19 18 17 38 38 H 1.08999 * 109.47345 * 305.00217 * 21 20 19 39 39 H 0.96700 * 114.00311 * 60.00230 * 22 21 20 40 40 H 1.48506 * 109.99973 * 180.02562 * 23 21 20 41 41 H 1.48493 * 110.00375 * 301.32185 * 23 21 20 42 42 H 1.07997 * 119.99933 * 179.72390 * 24 20 19 43 43 H 1.08000 * 120.00236 * 359.97438 * 25 17 14 44 44 H 1.09001 * 113.61087 * 105.47298 * 26 8 7 45 45 H 1.08998 * 113.61041 * 334.57462 * 26 8 7 46 46 H 1.08003 * 119.95276 * 179.72720 * 27 7 6 47 47 H 1.08004 * 120.01763 * 180.23153 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4333 1.2856 0.0005 5 9 4.1713 0.1539 0.0005 6 6 4.0579 2.5199 0.0000 7 6 3.3023 3.6777 -0.0005 8 6 3.9849 5.0212 -0.0005 9 1 5.0551 4.9522 0.1948 10 6 3.6363 5.8893 -1.2212 11 6 3.5895 7.0868 -0.2575 12 1 2.7773 7.7833 -0.4656 13 7 4.8823 7.7546 -0.0881 14 16 4.9450 9.3960 0.1224 15 8 4.1271 9.9622 -0.8924 16 8 6.3168 9.7270 0.2897 17 6 4.1557 9.7558 1.6560 18 6 4.8949 9.7843 2.8238 19 6 4.2758 10.0671 4.0270 20 6 2.9176 10.3220 4.0622 21 6 2.2425 10.6297 5.3740 22 8 2.7469 11.8626 5.8914 23 14 0.4044 10.7737 5.1077 24 6 2.1775 10.2885 2.8952 25 6 2.7975 10.0100 1.6914 26 6 3.2671 6.0770 0.8567 27 6 1.9216 3.6053 0.0044 28 6 1.2923 2.3751 -0.0009 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 5.1363 2.5791 0.0000 33 1 2.6708 5.6490 -1.6663 34 1 4.4387 5.9515 -1.9563 35 1 5.7016 7.2354 -0.0992 36 1 5.9562 9.5855 2.7962 37 1 4.8534 10.0897 4.9393 38 1 2.4451 9.8278 6.0839 39 1 2.6013 12.6219 5.3105 40 1 -0.2729 11.0777 6.3938 41 1 0.1167 11.8425 4.1177 42 1 1.1156 10.4832 2.9234 43 1 2.2201 9.9885 0.7789 44 1 3.7715 6.2908 1.7990 45 1 2.2007 5.8880 0.9796 46 1 1.3341 4.5115 0.0085 47 1 0.2137 2.3200 -0.0008 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_9824368_13421422.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:21:23 Heat of formation + Delta-G solvation = -96.830927 kcal Electronic energy + Delta-G solvation = -34043.969682 eV Core-core repulsion = 29201.470053 eV Total energy + Delta-G solvation = -4842.499629 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.113 amu Computer time = 2.28 seconds Orbital eigenvalues (eV) -49.68685 -41.54813 -40.80200 -40.43386 -38.35015 -38.12755 -37.92925 -36.90431 -34.19046 -33.12522 -32.30848 -31.88454 -31.06686 -28.48224 -27.35756 -26.86114 -25.92284 -24.21331 -23.89583 -23.09352 -22.80016 -21.00489 -20.42627 -19.52216 -19.27645 -18.77832 -18.27767 -17.98633 -17.54804 -17.35232 -17.14353 -16.87888 -16.62622 -16.42222 -16.25007 -16.00722 -15.93240 -15.76904 -15.60258 -15.35592 -15.18058 -14.91291 -14.63194 -14.44544 -14.16344 -13.94704 -13.81815 -13.78273 -13.62915 -13.33758 -13.22485 -13.14364 -13.08228 -12.86979 -12.75039 -12.60551 -12.46392 -12.42718 -11.94252 -11.88628 -11.84422 -11.62575 -11.44631 -10.84106 -10.69985 -10.48748 -10.24109 -9.98652 -9.12245 -5.14277 -0.77758 -0.42924 0.06819 0.09086 0.14184 1.06707 1.42867 1.78827 1.81032 2.10433 2.24405 2.42354 2.68980 3.13177 3.15381 3.18833 3.28706 3.36028 3.44097 3.47313 3.63467 3.64360 3.68247 3.75662 3.88654 3.94226 4.01006 4.05447 4.08864 4.11541 4.19317 4.23559 4.29127 4.43403 4.46386 4.49091 4.51109 4.55860 4.69447 4.71121 4.81138 4.84559 4.84734 4.86357 4.88628 4.99188 5.09015 5.14238 5.20846 5.44888 5.57004 5.59156 5.78568 6.18617 6.22169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.310 6.310 3 C 0.092 3.908 4 C 0.072 3.928 5 F -0.132 7.132 6 C -0.112 4.112 7 C -0.080 4.080 8 C -0.070 4.070 9 H 0.102 0.898 10 C -0.133 4.133 11 C 0.122 3.878 12 H 0.109 0.891 13 N -1.097 6.097 14 S 2.696 3.304 15 O -0.951 6.951 16 O -0.954 6.954 17 C -0.672 4.672 18 C -0.016 4.016 19 C -0.113 4.113 20 C -0.061 4.061 21 C -0.084 4.084 22 O -0.525 6.525 23 Si 0.688 3.312 24 C -0.140 4.140 25 C -0.015 4.015 26 C -0.148 4.148 27 C -0.086 4.086 28 C -0.178 4.178 29 H 0.058 0.942 30 H 0.059 0.941 31 H 0.104 0.896 32 H 0.142 0.858 33 H 0.099 0.901 34 H 0.082 0.918 35 H 0.421 0.579 36 H 0.143 0.857 37 H 0.136 0.864 38 H 0.124 0.876 39 H 0.378 0.622 40 H -0.254 1.254 41 H -0.257 1.257 42 H 0.137 0.863 43 H 0.144 0.856 44 H 0.080 0.920 45 H 0.099 0.901 46 H 0.135 0.865 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.513 -2.170 0.932 5.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.224 6.224 3 C 0.046 3.954 4 C 0.052 3.948 5 F -0.110 7.110 6 C -0.130 4.130 7 C -0.081 4.081 8 C -0.088 4.088 9 H 0.120 0.880 10 C -0.172 4.172 11 C 0.014 3.986 12 H 0.127 0.873 13 N -0.855 5.855 14 S 2.786 3.214 15 O -0.941 6.941 16 O -0.944 6.944 17 C -0.759 4.759 18 C -0.035 4.035 19 C -0.132 4.132 20 C -0.062 4.062 21 C -0.194 4.194 22 O -0.331 6.331 23 Si 0.589 3.411 24 C -0.158 4.158 25 C -0.034 4.034 26 C -0.187 4.187 27 C -0.104 4.104 28 C -0.197 4.197 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.123 0.877 32 H 0.160 0.840 33 H 0.118 0.882 34 H 0.101 0.899 35 H 0.256 0.744 36 H 0.161 0.839 37 H 0.154 0.846 38 H 0.142 0.858 39 H 0.226 0.774 40 H -0.178 1.178 41 H -0.182 1.182 42 H 0.154 0.846 43 H 0.162 0.838 44 H 0.099 0.901 45 H 0.117 0.883 46 H 0.152 0.848 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -5.732 -1.556 0.913 6.009 hybrid contribution 0.539 0.441 0.657 0.957 sum -5.194 -1.115 1.570 5.539 Atomic orbital electron populations 1.23152 0.77584 1.04610 1.01563 1.86161 1.21977 1.25708 1.88526 1.19070 0.90888 0.85837 0.99616 1.16995 0.86018 0.83088 1.08722 1.91524 1.76337 1.48980 1.94184 1.20929 1.01042 0.89727 1.01344 1.19412 0.93169 0.93997 1.01475 1.21517 0.99874 0.89869 0.97529 0.88030 1.23433 1.03764 0.93670 0.96375 1.21697 0.84701 0.94832 0.97336 0.87308 1.55354 1.13877 1.27346 1.88961 1.01907 0.73486 0.72204 0.73848 1.93618 1.70391 1.75689 1.54391 1.93627 1.32224 1.81806 1.86752 1.30985 1.05736 1.18215 1.20971 1.20996 0.99853 0.91751 0.90945 1.21196 0.94140 0.99344 0.98517 1.20676 0.94864 0.95222 0.95398 1.25202 1.09778 0.89521 0.94898 1.86636 1.81122 1.17036 1.48354 0.94981 0.74600 0.90258 0.81277 1.21198 1.00068 1.02173 0.92347 1.20890 0.92253 0.91553 0.98696 1.23654 1.01890 0.94965 0.98226 1.20863 0.93902 0.97290 0.98366 1.21157 1.00443 0.91388 1.06708 0.92298 0.92289 0.87743 0.84034 0.88212 0.89937 0.74396 0.83915 0.84567 0.85816 0.77384 1.17844 1.18209 0.84565 0.83783 0.90098 0.88265 0.84766 0.84325 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.65 10.36 -19.63 -0.20 -0.85 16 3 C 0.09 0.14 6.69 -39.18 -0.26 -0.12 16 4 C 0.07 0.16 7.31 -39.30 -0.29 -0.13 16 5 F -0.13 -0.56 17.11 2.25 0.04 -0.53 16 6 C -0.11 0.02 9.68 -39.54 -0.38 -0.36 16 7 C -0.08 0.15 5.29 -104.61 -0.55 -0.40 16 8 C -0.07 0.26 3.80 -90.96 -0.35 -0.09 16 9 H 0.10 -0.43 8.06 -51.93 -0.42 -0.85 16 10 C -0.13 0.52 7.33 -25.91 -0.19 0.33 16 11 C 0.12 -0.49 4.51 -67.12 -0.30 -0.79 16 12 H 0.11 -0.50 7.77 -51.93 -0.40 -0.91 16 13 N -1.10 3.42 5.73 -4.20 -0.02 3.40 16 14 S 2.70 -0.12 5.71 -107.50 -0.61 -0.73 16 15 O -0.95 -2.65 16.80 -57.17 -0.96 -3.61 16 16 O -0.95 -2.98 17.28 -57.17 -0.99 -3.97 16 17 C -0.67 0.52 5.95 -39.59 -0.24 0.29 16 18 C -0.02 0.01 9.52 -39.58 -0.38 -0.37 16 19 C -0.11 0.10 9.69 -39.58 -0.38 -0.28 16 20 C -0.06 0.09 5.35 -104.62 -0.56 -0.47 16 21 C -0.08 0.15 2.80 36.01 0.10 0.25 16 22 O -0.53 -0.01 12.83 -35.23 -0.45 -0.46 16 23 Si 0.69 -1.69 29.87 -169.99 -5.08 -6.77 16 24 C -0.14 0.27 8.67 -39.58 -0.34 -0.07 16 25 C -0.01 0.02 9.52 -39.58 -0.38 -0.35 16 26 C -0.15 0.68 7.25 -25.92 -0.19 0.49 16 27 C -0.09 0.21 8.61 -39.59 -0.34 -0.13 16 28 C -0.18 0.21 9.04 -39.45 -0.36 -0.14 16 29 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 30 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 31 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 32 H 0.14 -0.24 8.05 -52.49 -0.42 -0.66 16 33 H 0.10 -0.44 7.73 -51.93 -0.40 -0.84 16 34 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 35 H 0.42 -1.93 8.79 -34.48 -0.30 -2.23 16 36 H 0.14 -0.25 7.62 -52.48 -0.40 -0.65 16 37 H 0.14 -0.23 8.06 -52.49 -0.42 -0.65 16 38 H 0.12 -0.33 7.96 -51.93 -0.41 -0.75 16 39 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 40 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 41 H -0.26 0.13 7.01 56.52 0.40 0.53 16 42 H 0.14 -0.52 4.85 -52.49 -0.25 -0.77 16 43 H 0.14 -0.45 7.62 -52.49 -0.40 -0.85 16 44 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 45 H 0.10 -0.56 6.29 -51.93 -0.33 -0.88 16 46 H 0.13 -0.65 6.63 -52.48 -0.35 -1.00 16 47 H 0.14 -0.47 6.30 -52.48 -0.33 -0.80 16 LS Contribution 404.82 15.07 6.10 6.10 Total: 0.00 -11.80 404.82 -12.29 -24.09 By element: Atomic # 1 Polarization: -9.54 SS G_CDS: -5.71 Total: -15.26 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: -4.39 Total: -1.41 kcal Atomic # 7 Polarization: 3.42 SS G_CDS: -0.02 Total: 3.40 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -2.60 Total: -8.90 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.53 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.08 Total: -6.77 kcal Atomic # 16 Polarization: -0.12 SS G_CDS: -0.61 Total: -0.73 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -11.80 -12.29 -24.09 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9824368_13421422.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.739 kcal (2) G-P(sol) polarization free energy of solvation -11.804 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.092 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.28 seconds