Wall clock time and date at job start Sat Mar 6 2021 00:21:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35958 * 116.99511 * 2 1 4 4 C 1.38912 * 120.05987 * 180.02562 * 3 2 1 5 5 F 1.35097 * 120.04767 * 359.97438 * 4 3 2 6 6 C 1.38335 * 119.90106 * 179.97438 * 4 3 2 7 7 C 1.38251 * 120.03237 * 359.97438 * 6 4 3 8 8 C 1.50702 * 119.93611 * 180.02562 * 7 6 4 9 9 H 1.09003 * 112.84955 * 191.17268 * 8 7 6 10 10 C 1.53775 * 113.61467 * 322.48038 * 8 7 6 11 11 C 1.53784 * 87.08366 * 139.98112 * 10 8 7 12 12 H 1.08993 * 113.61593 * 220.02112 * 11 10 8 13 13 N 1.46500 * 113.68923 * 89.12654 * 11 10 8 14 14 S 1.65596 * 120.00060 * 117.47004 * 13 11 10 15 15 O 1.42098 * 106.40275 * 178.54169 * 14 13 11 16 16 O 1.42099 * 106.39999 * 311.45706 * 14 13 11 17 17 C 1.76198 * 107.21793 * 64.99770 * 14 13 11 18 18 C 1.33393 * 125.20328 * 90.00571 * 17 14 13 19 19 C 1.50698 * 122.53755 * 359.97438 * 18 17 14 20 20 O 1.42895 * 109.47309 * 75.00020 * 19 18 17 21 21 Si 1.86299 * 109.47013 * 195.00544 * 19 18 17 22 22 C 1.38423 * 114.92175 * 179.97438 * 18 17 14 23 23 C 1.33398 * 114.91718 * 359.97438 * 22 18 17 24 24 S 1.75884 * 109.59658 * 359.75576 * 23 22 18 25 25 C 1.53778 * 113.61546 * 59.97992 * 8 7 6 26 26 C 1.38264 * 120.12779 * 0.02562 * 7 6 4 27 27 C 1.38185 * 120.09170 * 359.97438 * 26 7 6 28 28 H 1.09001 * 109.47694 * 299.99974 * 1 2 3 29 29 H 1.09004 * 109.47321 * 60.00526 * 1 2 3 30 30 H 1.09001 * 109.46894 * 180.02562 * 1 2 3 31 31 H 1.08003 * 119.98126 * 179.97438 * 6 4 3 32 32 H 1.08996 * 113.61784 * 254.53123 * 10 8 7 33 33 H 1.09004 * 113.61337 * 25.43313 * 10 8 7 34 34 H 0.96999 * 119.99704 * 297.46931 * 13 11 10 35 35 H 1.09001 * 109.47188 * 315.00052 * 19 18 17 36 36 H 0.96700 * 113.99553 * 60.00057 * 20 19 18 37 37 H 1.48505 * 110.00002 * 180.02562 * 21 19 18 38 38 H 1.48503 * 109.99729 * 301.31591 * 21 19 18 39 39 H 1.07991 * 122.53793 * 179.97438 * 22 18 17 40 40 H 1.08000 * 125.19237 * 180.02562 * 23 22 18 41 41 H 1.09007 * 113.61486 * 334.56919 * 25 8 7 42 42 H 1.09004 * 113.61683 * 105.46915 * 25 8 7 43 43 H 1.07991 * 119.95333 * 180.27527 * 26 7 6 44 44 H 1.07998 * 120.01184 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2114 0.0000 4 6 3.4332 1.2857 -0.0005 5 9 4.1713 0.1541 -0.0005 6 6 4.0577 2.5201 -0.0011 7 6 3.3021 3.6778 -0.0016 8 6 3.9847 5.0214 -0.0028 9 1 3.2979 5.8452 0.1915 10 6 5.2603 5.0650 0.8549 11 6 5.8863 5.9197 -0.2599 12 1 6.9276 5.6731 -0.4666 13 7 5.6645 7.3582 -0.0935 14 16 6.9539 8.3760 0.1162 15 8 6.4177 9.6884 0.2118 16 8 7.7654 7.7925 1.1263 17 6 7.9001 8.3319 -1.3695 18 6 7.7254 9.1395 -2.4167 19 6 6.6665 10.2114 -2.4459 20 8 7.0734 11.3056 -1.6219 21 14 6.4322 10.8054 -4.1960 22 6 8.5904 8.9184 -3.4745 23 6 9.4679 7.9315 -3.2861 24 16 9.2252 7.2221 -1.6951 25 6 4.8918 5.2505 -1.2232 26 6 1.9214 3.6054 -0.0011 27 6 1.2921 2.3751 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 5.1361 2.5793 -0.0011 32 1 5.1353 5.5993 1.7966 33 1 5.7366 4.0923 0.9789 34 1 4.7624 7.7145 -0.1061 35 1 5.7271 9.8044 -2.0716 36 1 7.9040 11.7174 -1.8970 37 1 5.3908 11.8632 -4.2383 38 1 7.7138 11.3335 -4.7289 39 1 8.5572 9.5007 -4.3834 40 1 10.2161 7.6192 -3.9996 41 1 5.2672 4.3285 -1.6674 42 1 4.4691 5.9345 -1.9592 43 1 1.3339 4.5115 -0.0060 44 1 0.2136 2.3200 0.0003 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_9824368_13652106.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:21:28 Heat of formation + Delta-G solvation = -81.189821 kcal Electronic energy + Delta-G solvation = -32989.660738 eV Core-core repulsion = 28236.991605 eV Total energy + Delta-G solvation = -4752.669133 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.069 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -49.67463 -41.49760 -40.42797 -40.13079 -38.23056 -37.99726 -37.08605 -36.75156 -34.17633 -31.77785 -31.48715 -31.05120 -28.57269 -28.00933 -26.81641 -25.82285 -24.38229 -23.88470 -22.78708 -21.60585 -20.76980 -19.95289 -19.58415 -19.33876 -18.57868 -18.29895 -17.86971 -17.70776 -17.13918 -17.12597 -16.61297 -16.27893 -16.26767 -15.99269 -15.92449 -15.77002 -15.66493 -15.32972 -15.26848 -15.02958 -14.46767 -14.24078 -14.19835 -14.09562 -13.72438 -13.66054 -13.52954 -13.26928 -13.17417 -12.98611 -12.96456 -12.77527 -12.69929 -12.50070 -12.41320 -12.24499 -12.19226 -12.03990 -11.62765 -11.56354 -11.37134 -10.68208 -10.63911 -10.46438 -9.95805 -9.70985 -9.10177 -5.07473 -0.84085 -0.53782 0.08968 0.16742 0.26215 0.59832 1.13704 1.15676 1.48751 1.88736 1.95160 2.12240 2.44983 2.70560 3.18324 3.30269 3.35925 3.41863 3.48257 3.50661 3.57714 3.64210 3.79519 3.85658 3.91956 3.94338 4.06334 4.10509 4.13040 4.13404 4.21219 4.32937 4.42066 4.49065 4.54899 4.60868 4.63263 4.74224 4.79534 4.83405 4.86763 4.95325 4.98969 5.02526 5.08332 5.27646 5.47790 5.58997 5.82785 6.24122 6.43199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.310 6.310 3 C 0.092 3.908 4 C 0.072 3.928 5 F -0.131 7.131 6 C -0.114 4.114 7 C -0.080 4.080 8 C -0.069 4.069 9 H 0.104 0.896 10 C -0.145 4.145 11 C 0.125 3.875 12 H 0.101 0.899 13 N -1.096 6.096 14 S 2.709 3.291 15 O -0.920 6.920 16 O -0.949 6.949 17 C -0.775 4.775 18 C 0.008 3.992 19 C -0.075 4.075 20 O -0.492 6.492 21 Si 0.691 3.309 22 C -0.169 4.169 23 C -0.163 4.163 24 S 0.225 5.775 25 C -0.136 4.136 26 C -0.084 4.084 27 C -0.179 4.179 28 H 0.058 0.942 29 H 0.058 0.942 30 H 0.104 0.896 31 H 0.144 0.856 32 H 0.083 0.917 33 H 0.099 0.901 34 H 0.421 0.579 35 H 0.121 0.879 36 H 0.369 0.631 37 H -0.250 1.250 38 H -0.256 1.256 39 H 0.154 0.846 40 H 0.178 0.822 41 H 0.099 0.901 42 H 0.083 0.917 43 H 0.133 0.867 44 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.829 -1.795 -5.733 6.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.224 6.224 3 C 0.046 3.954 4 C 0.053 3.947 5 F -0.110 7.110 6 C -0.133 4.133 7 C -0.080 4.080 8 C -0.088 4.088 9 H 0.122 0.878 10 C -0.185 4.185 11 C 0.016 3.984 12 H 0.119 0.881 13 N -0.855 5.855 14 S 2.793 3.207 15 O -0.910 6.910 16 O -0.939 6.939 17 C -0.976 4.976 18 C -0.010 4.010 19 C -0.187 4.187 20 O -0.296 6.296 21 Si 0.591 3.409 22 C -0.198 4.198 23 C -0.301 4.301 24 S 0.492 5.508 25 C -0.176 4.176 26 C -0.102 4.102 27 C -0.198 4.198 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.123 0.877 31 H 0.162 0.838 32 H 0.102 0.898 33 H 0.117 0.883 34 H 0.256 0.744 35 H 0.139 0.861 36 H 0.215 0.785 37 H -0.175 1.175 38 H -0.181 1.181 39 H 0.172 0.828 40 H 0.195 0.805 41 H 0.117 0.883 42 H 0.102 0.898 43 H 0.151 0.849 44 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.099 -2.297 -4.418 5.404 hybrid contribution -0.109 1.443 -0.941 1.727 sum -2.209 -0.854 -5.360 5.860 Atomic orbital electron populations 1.23153 0.77600 1.04590 1.01568 1.86157 1.21966 1.25703 1.88538 1.19069 0.90913 0.85804 0.99643 1.16956 0.85969 0.83058 1.08754 1.91522 1.76316 1.48962 1.94195 1.20856 1.01123 0.89656 1.01626 1.19411 0.93072 0.94097 1.01430 1.21524 0.95654 0.94105 0.97478 0.87828 1.23605 0.95497 1.00939 0.98419 1.21643 0.99838 0.79249 0.97632 0.88136 1.55455 1.23172 1.16684 1.90207 1.01796 0.73022 0.73149 0.72733 1.93736 1.77683 1.34388 1.85212 1.93634 1.68788 1.78585 1.52849 1.35829 1.20973 1.13985 1.26771 1.19158 0.96024 0.94646 0.91157 1.25063 0.97561 0.87637 1.08452 1.86929 1.44065 1.45858 1.52792 0.95200 0.82027 0.87494 0.76159 1.20343 0.97613 1.01104 1.00783 1.26231 1.03033 1.00188 1.00642 1.84367 1.25785 1.31555 1.09097 1.23491 0.96073 1.01601 0.96387 1.20928 0.93882 0.97325 0.98050 1.21169 1.00458 0.91447 1.06712 0.92310 0.92305 0.87736 0.83841 0.89833 0.88294 0.74383 0.86090 0.78481 1.17495 1.18116 0.82835 0.80456 0.88278 0.89829 0.84949 0.84381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.74 10.36 -19.61 -0.20 -0.95 16 3 C 0.09 0.17 6.69 -39.18 -0.26 -0.09 16 4 C 0.07 0.17 7.31 -39.30 -0.29 -0.12 16 5 F -0.13 -0.55 17.11 2.25 0.04 -0.51 16 6 C -0.11 0.02 8.58 -39.54 -0.34 -0.32 16 7 C -0.08 0.11 5.29 -104.61 -0.55 -0.44 16 8 C -0.07 0.21 3.80 -90.96 -0.35 -0.13 16 9 H 0.10 -0.43 8.07 -51.93 -0.42 -0.85 16 10 C -0.15 0.33 7.25 -25.92 -0.19 0.14 16 11 C 0.12 -0.32 4.43 -67.12 -0.30 -0.62 16 12 H 0.10 -0.29 8.05 -51.93 -0.42 -0.71 16 13 N -1.10 2.19 5.73 -4.20 -0.02 2.17 16 14 S 2.71 4.34 5.61 -107.50 -0.60 3.74 16 15 O -0.92 -3.91 14.29 -66.03 -0.94 -4.85 16 16 O -0.95 -4.47 17.66 -57.17 -1.01 -5.48 16 17 C -0.77 -0.33 6.54 29.04 0.19 -0.14 16 18 C 0.01 0.00 5.13 -106.25 -0.55 -0.55 16 19 C -0.07 0.01 1.79 36.00 0.06 0.07 16 20 O -0.49 -1.11 11.12 -56.67 -0.63 -1.74 16 21 Si 0.69 -1.22 30.46 -169.99 -5.18 -6.40 16 22 C -0.17 0.30 8.74 -41.21 -0.36 -0.06 16 23 C -0.16 0.37 11.23 29.04 0.33 0.70 16 24 S 0.22 -0.17 23.21 -107.50 -2.50 -2.66 16 25 C -0.14 0.52 7.33 -25.92 -0.19 0.33 16 26 C -0.08 0.12 9.70 -39.59 -0.38 -0.26 16 27 C -0.18 0.09 9.04 -39.45 -0.36 -0.27 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 31 H 0.14 -0.28 6.65 -52.48 -0.35 -0.63 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 33 H 0.10 -0.27 6.31 -51.93 -0.33 -0.60 16 34 H 0.42 -1.69 8.80 -34.47 -0.30 -2.00 16 35 H 0.12 -0.12 7.16 -51.93 -0.37 -0.49 16 36 H 0.37 -0.39 8.70 45.56 0.40 0.01 16 37 H -0.25 -0.40 7.11 56.52 0.40 0.01 16 38 H -0.26 0.10 6.80 56.52 0.38 0.48 16 39 H 0.15 -0.51 5.53 -52.49 -0.29 -0.80 16 40 H 0.18 -0.86 8.06 -52.49 -0.42 -1.29 16 41 H 0.10 -0.41 7.72 -51.92 -0.40 -0.81 16 42 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 43 H 0.13 -0.47 8.05 -52.49 -0.42 -0.89 16 44 H 0.14 -0.35 6.30 -52.49 -0.33 -0.68 16 LS Contribution 391.29 15.07 5.90 5.90 Total: 0.00 -11.46 391.29 -12.63 -24.09 By element: Atomic # 1 Polarization: -7.55 SS G_CDS: -4.94 Total: -12.49 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -2.54 Total: -0.81 kcal Atomic # 7 Polarization: 2.19 SS G_CDS: -0.02 Total: 2.17 kcal Atomic # 8 Polarization: -10.24 SS G_CDS: -2.79 Total: -13.02 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.04 Total: -0.51 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.18 Total: -6.40 kcal Atomic # 16 Polarization: 4.18 SS G_CDS: -3.10 Total: 1.08 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -11.46 -12.63 -24.09 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9824368_13652106.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.102 kcal (2) G-P(sol) polarization free energy of solvation -11.460 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.562 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.627 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.088 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds