Wall clock time and date at job start Sat Mar 6 2021 00:21:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35957 * 117.00149 * 2 1 4 4 C 1.38909 * 120.06470 * 180.29802 * 3 2 1 5 5 F 1.35109 * 120.04564 * 359.97438 * 4 3 2 6 6 C 1.38324 * 119.90376 * 180.25166 * 4 3 2 7 7 C 1.38260 * 120.03192 * 359.44876 * 6 4 3 8 8 C 1.50699 * 119.93579 * 180.29723 * 7 6 4 9 9 H 1.09001 * 112.85136 * 348.80681 * 8 7 6 10 10 C 1.53789 * 113.61177 * 120.00247 * 8 7 6 11 11 C 1.53781 * 87.07970 * 139.97803 * 10 8 7 12 12 H 1.08994 * 113.61448 * 219.93147 * 11 10 8 13 13 N 1.46506 * 113.61407 * 89.11649 * 11 10 8 14 14 S 1.65599 * 120.00140 * 126.17277 * 13 11 10 15 15 O 1.42097 * 106.40149 * 179.27813 * 14 13 11 16 16 O 1.42094 * 106.40241 * 312.20132 * 14 13 11 17 17 C 1.76203 * 107.21613 * 65.73743 * 14 13 11 18 18 C 1.33390 * 122.53912 * 165.46438 * 17 14 13 19 19 C 1.50703 * 125.19921 * 359.97438 * 18 17 14 20 20 O 1.42895 * 109.47432 * 50.09012 * 19 18 17 21 21 Si 1.86302 * 109.46802 * 170.08915 * 19 18 17 22 22 S 1.75884 * 109.59500 * 180.02562 * 18 17 14 23 23 C 1.75883 * 90.96910 * 359.97438 * 22 18 17 24 24 C 1.33389 * 109.59717 * 359.73528 * 23 22 18 25 25 C 1.53779 * 87.08154 * 334.56702 * 11 10 8 26 26 C 1.38256 * 120.12120 * 0.27656 * 7 6 4 27 27 C 1.38173 * 120.10203 * 359.97438 * 26 7 6 28 28 H 1.09001 * 109.47076 * 300.00213 * 1 2 3 29 29 H 1.08995 * 109.47236 * 59.99979 * 1 2 3 30 30 H 1.08997 * 109.47551 * 180.02562 * 1 2 3 31 31 H 1.08004 * 119.98602 * 179.72639 * 6 4 3 32 32 H 1.08997 * 113.61128 * 254.52916 * 10 8 7 33 33 H 1.08996 * 113.61333 * 25.42783 * 10 8 7 34 34 H 0.97003 * 119.99752 * 306.17316 * 13 11 10 35 35 H 1.09005 * 109.46923 * 290.08461 * 19 18 17 36 36 H 0.96697 * 114.00364 * 184.91823 * 20 19 18 37 37 H 1.48499 * 109.99866 * 299.99922 * 21 19 18 38 38 H 1.48501 * 110.00316 * 61.31614 * 21 19 18 39 39 H 1.08000 * 125.20209 * 179.97438 * 23 22 18 40 40 H 1.07998 * 122.54325 * 180.23773 * 24 23 22 41 41 H 1.08998 * 113.61765 * 270.88213 * 25 11 10 42 42 H 1.09006 * 113.61686 * 139.98275 * 25 11 10 43 43 H 1.08009 * 119.94909 * 179.97438 * 26 7 6 44 44 H 1.07996 * 120.02098 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 -0.0063 5 9 4.1713 0.1539 -0.0118 6 6 4.0579 2.5198 -0.0010 7 6 3.3023 3.6777 -0.0010 8 6 3.9851 5.0212 -0.0020 9 1 5.0554 4.9522 0.1923 10 6 3.6352 5.8890 -1.2225 11 6 3.5893 7.0867 -0.2590 12 1 2.7770 7.7831 -0.4666 13 7 4.8823 7.7546 -0.0910 14 16 5.0109 9.3859 -0.3454 15 8 6.3665 9.7263 -0.0891 16 8 4.3633 9.6514 -1.5819 17 6 4.0533 10.1849 0.8994 18 6 4.1614 11.4883 1.1615 19 6 5.0896 12.4424 0.4550 20 8 4.9363 12.2975 -0.9583 21 14 4.6763 14.1907 0.9485 22 16 3.0558 11.9228 2.4587 23 6 2.4919 10.2608 2.5750 24 6 3.1274 9.5087 1.6752 25 6 3.2680 6.0771 0.8557 26 6 1.9217 3.6052 -0.0005 27 6 1.2923 2.3752 -0.0006 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 5.1363 2.5790 -0.0014 32 1 4.4369 5.9510 -1.9583 33 1 2.6693 5.6486 -1.6666 34 1 5.6632 7.2413 0.1693 35 1 6.1198 12.2202 0.7335 36 1 5.5566 12.8272 -1.4776 37 1 3.2742 14.5060 0.5743 38 1 4.8624 14.3630 2.4117 39 1 1.7426 9.9046 3.2664 40 1 2.9372 8.4515 1.5633 41 1 2.2017 5.8882 0.9797 42 1 3.7733 6.2911 1.7976 43 1 1.3341 4.5115 -0.0001 44 1 0.2137 2.3201 0.0002 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_9824368_14772022.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:21:32 Heat of formation + Delta-G solvation = -82.231278 kcal Electronic energy + Delta-G solvation = -32957.114202 eV Core-core repulsion = 28204.399907 eV Total energy + Delta-G solvation = -4752.714294 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.069 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -49.67604 -41.55939 -40.46255 -39.53380 -38.28082 -37.92998 -37.63866 -36.63370 -34.19510 -32.00374 -31.87515 -31.05101 -28.47550 -27.55302 -26.91377 -25.94172 -24.36124 -23.88789 -22.79089 -21.73727 -20.84372 -20.19515 -19.39159 -18.90095 -18.64692 -18.23649 -17.95283 -17.71312 -17.49730 -17.16024 -17.13063 -16.40172 -16.21371 -15.99778 -15.90256 -15.68976 -15.54702 -15.29563 -15.17338 -14.98598 -14.51940 -14.45557 -14.18315 -13.95633 -13.82904 -13.76412 -13.58270 -13.30910 -13.19185 -12.95486 -12.93341 -12.85157 -12.76094 -12.53976 -12.44057 -12.40725 -12.16686 -11.88250 -11.77221 -11.62707 -11.43773 -10.77423 -10.64819 -10.14517 -9.97726 -9.84316 -9.11216 -5.35249 -0.64234 -0.53363 0.07805 0.14988 0.29749 0.61535 0.96937 1.10687 1.45215 1.75321 1.94256 2.11178 2.43174 2.75179 3.00548 3.16398 3.25918 3.42666 3.47621 3.48682 3.60278 3.65254 3.76560 3.88940 3.91822 3.98157 4.05858 4.10266 4.12070 4.12203 4.20343 4.22546 4.44255 4.45039 4.49946 4.54995 4.57259 4.70717 4.75662 4.79447 4.85559 4.92580 4.99914 5.03756 5.09767 5.22647 5.46077 5.57872 5.83518 6.22939 6.38166 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.310 6.310 3 C 0.092 3.908 4 C 0.072 3.928 5 F -0.132 7.132 6 C -0.111 4.111 7 C -0.080 4.080 8 C -0.068 4.068 9 H 0.103 0.897 10 C -0.138 4.138 11 C 0.119 3.881 12 H 0.109 0.891 13 N -1.101 6.101 14 S 2.719 3.281 15 O -0.953 6.953 16 O -0.930 6.930 17 C -0.657 4.657 18 C -0.052 4.052 19 C -0.085 4.085 20 O -0.539 6.539 21 Si 0.693 3.307 22 S 0.137 5.863 23 C -0.205 4.205 24 C -0.090 4.090 25 C -0.150 4.150 26 C -0.087 4.087 27 C -0.178 4.178 28 H 0.058 0.942 29 H 0.059 0.941 30 H 0.104 0.896 31 H 0.143 0.857 32 H 0.083 0.917 33 H 0.099 0.901 34 H 0.421 0.579 35 H 0.110 0.890 36 H 0.397 0.603 37 H -0.233 1.233 38 H -0.234 1.234 39 H 0.177 0.823 40 H 0.156 0.844 41 H 0.101 0.899 42 H 0.083 0.917 43 H 0.134 0.866 44 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.437 2.437 2.139 4.057 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.224 6.224 3 C 0.046 3.954 4 C 0.052 3.948 5 F -0.110 7.110 6 C -0.130 4.130 7 C -0.080 4.080 8 C -0.086 4.086 9 H 0.121 0.879 10 C -0.177 4.177 11 C 0.011 3.989 12 H 0.127 0.873 13 N -0.860 5.860 14 S 2.804 3.196 15 O -0.944 6.944 16 O -0.919 6.919 17 C -0.755 4.755 18 C -0.173 4.173 19 C -0.197 4.197 20 O -0.348 6.348 21 Si 0.591 3.409 22 S 0.401 5.599 23 C -0.341 4.341 24 C -0.119 4.119 25 C -0.189 4.189 26 C -0.105 4.105 27 C -0.197 4.197 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.123 0.877 31 H 0.160 0.840 32 H 0.102 0.898 33 H 0.117 0.883 34 H 0.256 0.744 35 H 0.127 0.873 36 H 0.247 0.753 37 H -0.156 1.156 38 H -0.158 1.158 39 H 0.194 0.806 40 H 0.173 0.827 41 H 0.119 0.881 42 H 0.102 0.898 43 H 0.152 0.848 44 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -3.424 4.187 2.924 6.148 hybrid contribution 0.066 -2.337 0.228 2.349 sum -3.358 1.850 3.151 4.963 Atomic orbital electron populations 1.23154 0.77591 1.04613 1.01556 1.86158 1.21970 1.25697 1.88528 1.19069 0.90893 0.85823 0.99624 1.16986 0.86002 0.83085 1.08706 1.91525 1.76332 1.48966 1.94184 1.20929 1.01073 0.89701 1.01296 1.19409 0.93156 0.93995 1.01478 1.21500 0.99851 0.89785 0.97509 0.87898 1.23509 1.03796 0.93867 0.96510 1.21743 0.84758 0.94894 0.97472 0.87334 1.55470 1.16808 1.27023 1.86677 1.01548 0.73293 0.71213 0.73576 1.93581 1.32750 1.82143 1.85894 1.93628 1.76742 1.82951 1.38595 1.29904 1.18287 1.04128 1.23142 1.23535 0.99097 0.95255 0.99383 1.24636 1.00467 1.08811 0.85741 1.86514 1.62480 1.72051 1.13742 0.94188 0.85048 0.78703 0.83012 1.84452 1.32975 1.10715 1.31794 1.25909 1.06655 0.95862 1.05638 1.19847 0.95493 1.01284 0.95230 1.23675 1.02142 0.95003 0.98092 1.20860 0.93916 0.97297 0.98404 1.21151 1.00437 0.91385 1.06721 0.92332 0.92284 0.87718 0.83967 0.89804 0.88280 0.74435 0.87260 0.75294 1.15600 1.15808 0.80603 0.82662 0.88088 0.89826 0.84821 0.84338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 25. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.80 10.36 -19.60 -0.20 -1.00 16 3 C 0.09 0.19 6.69 -39.17 -0.26 -0.07 16 4 C 0.07 0.20 7.31 -39.30 -0.29 -0.09 16 5 F -0.13 -0.62 17.11 2.25 0.04 -0.58 16 6 C -0.11 -0.04 9.68 -39.54 -0.38 -0.42 16 7 C -0.08 0.09 5.29 -104.61 -0.55 -0.46 16 8 C -0.07 0.19 3.78 -90.96 -0.34 -0.15 16 9 H 0.10 -0.36 7.99 -51.93 -0.42 -0.78 16 10 C -0.14 0.33 7.34 -25.91 -0.19 0.14 16 11 C 0.12 -0.29 2.80 -67.12 -0.19 -0.47 16 12 H 0.11 -0.28 7.50 -51.93 -0.39 -0.67 16 13 N -1.10 1.44 5.52 -4.20 -0.02 1.42 16 14 S 2.72 6.60 4.37 -107.50 -0.47 6.13 16 15 O -0.95 -4.24 17.22 -57.17 -0.98 -5.22 16 16 O -0.93 -5.08 16.82 -63.43 -1.07 -6.15 16 17 C -0.66 -1.49 5.72 -41.21 -0.24 -1.73 16 18 C -0.05 -0.14 5.79 -36.00 -0.21 -0.35 16 19 C -0.08 -0.08 2.15 36.01 0.08 0.00 16 20 O -0.54 -0.74 10.70 -48.31 -0.52 -1.26 16 21 Si 0.69 -0.76 31.09 -169.99 -5.29 -6.05 16 22 S 0.14 0.19 20.65 -107.50 -2.22 -2.03 16 23 C -0.21 0.03 11.23 29.04 0.33 0.35 16 24 C -0.09 -0.01 9.32 -41.21 -0.38 -0.40 16 25 C -0.15 0.58 6.20 -25.92 -0.16 0.42 16 26 C -0.09 0.14 8.60 -39.60 -0.34 -0.20 16 27 C -0.18 0.10 9.04 -39.45 -0.36 -0.26 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 31 H 0.14 -0.17 8.05 -52.48 -0.42 -0.59 16 32 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.10 -0.30 7.72 -51.93 -0.40 -0.70 16 34 H 0.42 -1.32 8.70 -34.47 -0.30 -1.62 16 35 H 0.11 -0.04 7.71 -51.93 -0.40 -0.44 16 36 H 0.40 -1.56 8.86 45.56 0.40 -1.16 16 37 H -0.23 -0.37 7.11 56.52 0.40 0.03 16 38 H -0.23 -0.07 7.11 56.52 0.40 0.33 16 39 H 0.18 -0.52 8.06 -52.49 -0.42 -0.94 16 40 H 0.16 -0.42 4.85 -52.49 -0.25 -0.67 16 41 H 0.10 -0.50 6.30 -51.93 -0.33 -0.83 16 42 H 0.08 -0.35 8.12 -51.93 -0.42 -0.77 16 43 H 0.13 -0.53 6.65 -52.48 -0.35 -0.88 16 44 H 0.14 -0.37 6.30 -52.49 -0.33 -0.70 16 LS Contribution 387.24 15.07 5.84 5.84 Total: 0.00 -12.24 387.24 -12.26 -24.51 By element: Atomic # 1 Polarization: -7.98 SS G_CDS: -4.87 Total: -12.85 kcal Atomic # 6 Polarization: -0.25 SS G_CDS: -2.50 Total: -2.75 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -0.02 Total: 1.42 kcal Atomic # 8 Polarization: -10.86 SS G_CDS: -2.77 Total: -13.63 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.04 Total: -0.58 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.29 Total: -6.05 kcal Atomic # 16 Polarization: 6.79 SS G_CDS: -2.69 Total: 4.10 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -12.24 -12.26 -24.51 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9824368_14772022.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.725 kcal (2) G-P(sol) polarization free energy of solvation -12.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.506 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.231 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds