Wall clock time and date at job start Sat Mar 6 2021 00:21:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35955 * 116.99637 * 2 1 4 4 C 1.38910 * 120.05762 * 180.02562 * 3 2 1 5 5 F 1.35102 * 120.05087 * 0.02562 * 4 3 2 6 6 C 1.38334 * 119.90207 * 179.97438 * 4 3 2 7 7 C 1.38262 * 120.03047 * 359.97438 * 6 4 3 8 8 C 1.50695 * 119.93466 * 180.02562 * 7 6 4 9 9 H 1.08998 * 112.85651 * 348.80817 * 8 7 6 10 10 C 1.53784 * 113.61538 * 120.00470 * 8 7 6 11 11 C 1.53776 * 87.08605 * 139.97948 * 10 8 7 12 12 H 1.08996 * 113.61602 * 219.93957 * 11 10 8 13 13 N 1.46497 * 113.61705 * 89.11382 * 11 10 8 14 14 S 1.65597 * 120.00068 * 145.00131 * 13 11 10 15 15 O 1.42099 * 106.40294 * 178.54460 * 14 13 11 16 16 O 1.42097 * 106.40250 * 311.46196 * 14 13 11 17 17 C 1.76196 * 107.21981 * 65.00322 * 14 13 11 18 18 C 1.33387 * 122.54101 * 90.02286 * 17 14 13 19 19 S 1.75888 * 109.59317 * 180.02562 * 18 17 14 20 20 C 1.75881 * 90.97042 * 0.02562 * 19 18 17 21 21 C 1.50704 * 125.20141 * 179.97438 * 20 19 18 22 22 O 1.42896 * 109.46929 * 244.97694 * 21 20 19 23 23 Si 1.86298 * 109.46862 * 4.97599 * 21 20 19 24 24 C 1.33383 * 109.59546 * 359.73453 * 20 19 18 25 25 C 1.53778 * 113.61392 * 217.49786 * 8 7 6 26 26 C 1.38261 * 120.12332 * 359.79232 * 7 6 4 27 27 C 1.38177 * 120.09801 * 0.46645 * 26 7 6 28 28 H 1.09003 * 109.46951 * 60.00587 * 1 2 3 29 29 H 1.09001 * 109.47121 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47602 * 300.00449 * 1 2 3 31 31 H 1.07998 * 119.98379 * 180.02562 * 6 4 3 32 32 H 1.09002 * 113.61224 * 254.53123 * 10 8 7 33 33 H 1.09006 * 113.61110 * 25.42684 * 10 8 7 34 34 H 0.96999 * 119.99738 * 325.00958 * 13 11 10 35 35 H 1.08003 * 125.20048 * 0.02562 * 18 17 14 36 36 H 1.08997 * 109.46703 * 124.97356 * 21 20 19 37 37 H 0.96702 * 114.00375 * 60.00163 * 22 21 20 38 38 H 1.48508 * 109.99982 * 179.97438 * 23 21 20 39 39 H 1.48498 * 110.00089 * 301.31635 * 23 21 20 40 40 H 1.08005 * 122.54393 * 180.24310 * 24 20 19 41 41 H 1.09003 * 113.61591 * 334.57127 * 25 8 7 42 42 H 1.08998 * 113.61561 * 105.47173 * 25 8 7 43 43 H 1.08003 * 119.95101 * 180.25167 * 26 7 6 44 44 H 1.08002 * 120.01936 * 179.79353 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 -0.0005 5 9 4.1713 0.1540 -0.0016 6 6 4.0579 2.5199 -0.0011 7 6 3.3022 3.6778 -0.0016 8 6 3.9849 5.0212 -0.0028 9 1 5.0552 4.9525 0.1918 10 6 3.6354 5.8888 -1.2235 11 6 3.5892 7.0867 -0.2604 12 1 2.7769 7.7831 -0.4683 13 7 4.8821 7.7547 -0.0921 14 16 4.9450 9.3961 0.1175 15 8 6.3169 9.7272 0.2836 16 8 4.1264 9.9618 -0.8970 17 6 4.1568 9.7567 1.6515 18 6 4.8214 9.7983 2.8073 19 16 3.7091 10.1852 4.1137 20 6 2.3642 10.2704 2.9834 21 6 0.9368 10.5818 3.3534 22 8 0.1171 9.4411 3.0910 23 14 0.8441 11.0100 5.1641 24 6 2.8017 10.0223 1.7480 25 6 3.2676 6.0774 0.8545 26 6 1.9215 3.6053 -0.0059 27 6 1.2922 2.3752 0.0000 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 5.1362 2.5791 -0.0019 32 1 4.4373 5.9506 -1.9592 33 1 2.6695 5.6483 -1.6679 34 1 5.7014 7.2355 -0.1037 35 1 5.8806 9.6215 2.9231 36 1 0.5843 11.4266 2.7617 37 1 0.3738 8.6503 3.5848 38 1 -0.5584 11.3198 5.5416 39 1 1.3520 9.8782 5.9804 40 1 2.1476 10.0251 0.8886 41 1 2.2013 5.8885 0.9782 42 1 3.7726 6.2916 1.7963 43 1 1.3340 4.5115 -0.0105 44 1 0.2136 2.3200 -0.0001 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_9824368_15065232.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:21:37 Heat of formation + Delta-G solvation = -89.656914 kcal Electronic energy + Delta-G solvation = -32758.240518 eV Core-core repulsion = 28005.204224 eV Total energy + Delta-G solvation = -4753.036294 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.069 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -49.69609 -41.55136 -40.44524 -39.58329 -38.32734 -38.12580 -37.73078 -36.88817 -34.18783 -31.92478 -31.89208 -31.07177 -28.48821 -27.30384 -26.88345 -25.92116 -24.98379 -23.90658 -22.80717 -21.53623 -20.80538 -20.19418 -19.44039 -19.30063 -18.68003 -18.00247 -17.96760 -17.72351 -17.52822 -17.15195 -17.06820 -16.51652 -16.44994 -16.05811 -16.01491 -15.74485 -15.59873 -15.37608 -15.20977 -14.93678 -14.49599 -14.32615 -14.27571 -13.98678 -13.90237 -13.79611 -13.63785 -13.34338 -13.23568 -13.17410 -13.07045 -12.97077 -12.87088 -12.52571 -12.48205 -12.44356 -12.36130 -11.89949 -11.68682 -11.59046 -11.44743 -10.90906 -10.67323 -10.30550 -9.99502 -9.92745 -9.12959 -5.21113 -0.80811 -0.53458 0.06017 0.13326 0.24548 0.50709 0.94148 1.05923 1.38743 1.75420 1.95788 2.09657 2.41542 2.68590 3.09530 3.15212 3.21950 3.29432 3.43896 3.46971 3.53458 3.63942 3.75415 3.76100 3.88550 3.93271 4.00958 4.08377 4.10911 4.17220 4.19141 4.34425 4.42565 4.45804 4.49796 4.55618 4.56294 4.70666 4.80118 4.82566 4.83934 4.86067 4.98507 4.99682 5.08418 5.20903 5.44339 5.56168 5.78689 6.14555 6.21325 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.310 6.310 3 C 0.092 3.908 4 C 0.072 3.928 5 F -0.132 7.132 6 C -0.112 4.112 7 C -0.080 4.080 8 C -0.069 4.069 9 H 0.102 0.898 10 C -0.133 4.133 11 C 0.124 3.876 12 H 0.110 0.890 13 N -1.096 6.096 14 S 2.711 3.289 15 O -0.954 6.954 16 O -0.947 6.947 17 C -0.686 4.686 18 C -0.082 4.082 19 S 0.159 5.841 20 C -0.226 4.226 21 C -0.033 4.033 22 O -0.521 6.521 23 Si 0.650 3.350 24 C -0.042 4.042 25 C -0.147 4.147 26 C -0.086 4.086 27 C -0.178 4.178 28 H 0.059 0.941 29 H 0.104 0.896 30 H 0.058 0.942 31 H 0.142 0.858 32 H 0.082 0.918 33 H 0.099 0.901 34 H 0.420 0.580 35 H 0.185 0.815 36 H 0.130 0.870 37 H 0.377 0.623 38 H -0.233 1.233 39 H -0.239 1.239 40 H 0.157 0.843 41 H 0.098 0.902 42 H 0.078 0.922 43 H 0.134 0.866 44 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.592 0.521 3.270 4.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.223 6.223 3 C 0.046 3.954 4 C 0.052 3.948 5 F -0.110 7.110 6 C -0.130 4.130 7 C -0.081 4.081 8 C -0.088 4.088 9 H 0.120 0.880 10 C -0.172 4.172 11 C 0.016 3.984 12 H 0.128 0.872 13 N -0.855 5.855 14 S 2.798 3.202 15 O -0.944 6.944 16 O -0.936 6.936 17 C -0.786 4.786 18 C -0.221 4.221 19 S 0.422 5.578 20 C -0.344 4.344 21 C -0.146 4.146 22 O -0.327 6.327 23 Si 0.548 3.452 24 C -0.071 4.071 25 C -0.187 4.187 26 C -0.104 4.104 27 C -0.197 4.197 28 H 0.077 0.923 29 H 0.123 0.877 30 H 0.077 0.923 31 H 0.160 0.840 32 H 0.101 0.899 33 H 0.118 0.882 34 H 0.256 0.744 35 H 0.203 0.797 36 H 0.148 0.852 37 H 0.225 0.775 38 H -0.156 1.156 39 H -0.163 1.163 40 H 0.174 0.826 41 H 0.116 0.884 42 H 0.097 0.903 43 H 0.152 0.848 44 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -2.806 1.416 4.695 5.650 hybrid contribution -0.309 -1.892 -1.013 2.168 sum -3.114 -0.475 3.682 4.846 Atomic orbital electron populations 1.23157 0.77578 1.04614 1.01565 1.86159 1.21979 1.25689 1.88522 1.19068 0.90891 0.85827 0.99609 1.16990 0.86008 0.83088 1.08739 1.91523 1.76324 1.48975 1.94186 1.20926 1.01032 0.89714 1.01365 1.19416 0.93154 0.94009 1.01483 1.21517 0.99833 0.89858 0.97562 0.88020 1.23432 1.03769 0.93671 0.96363 1.21681 0.84695 0.94842 0.97203 0.87231 1.55357 1.13845 1.27422 1.88864 1.01583 0.73220 0.72061 0.73369 1.93623 1.32109 1.81918 1.86768 1.93617 1.70348 1.75659 1.54020 1.30031 1.05676 1.21649 1.21216 1.25907 1.04071 0.97226 0.94901 1.84482 0.98189 1.64892 1.10202 1.24988 1.00032 1.12559 0.96821 1.24391 0.84992 0.92118 1.13067 1.86647 1.55822 1.21256 1.69019 0.95126 0.87227 0.88892 0.73932 1.19610 0.92317 0.97222 0.97975 1.23634 1.01812 0.95063 0.98142 1.20866 0.93929 0.97299 0.98336 1.21157 1.00448 0.91391 1.06706 0.92272 0.87720 0.92329 0.84016 0.89891 0.88231 0.74448 0.79736 0.85206 0.77543 1.15554 1.16317 0.82589 0.88382 0.90316 0.84812 0.84343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.77 10.36 -19.60 -0.20 -0.97 16 3 C 0.09 0.18 6.69 -39.18 -0.26 -0.08 16 4 C 0.07 0.18 7.31 -39.30 -0.29 -0.10 16 5 F -0.13 -0.60 17.11 2.25 0.04 -0.56 16 6 C -0.11 -0.02 9.68 -39.54 -0.38 -0.40 16 7 C -0.08 0.11 5.29 -104.61 -0.55 -0.44 16 8 C -0.07 0.23 3.80 -90.96 -0.35 -0.12 16 9 H 0.10 -0.40 8.06 -51.93 -0.42 -0.82 16 10 C -0.13 0.44 7.33 -25.92 -0.19 0.25 16 11 C 0.12 -0.40 4.51 -67.12 -0.30 -0.70 16 12 H 0.11 -0.37 7.77 -51.93 -0.40 -0.77 16 13 N -1.10 3.07 5.73 -4.20 -0.02 3.04 16 14 S 2.71 0.30 5.77 -107.50 -0.62 -0.32 16 15 O -0.95 -2.75 17.64 -57.17 -1.01 -3.76 16 16 O -0.95 -3.11 17.15 -57.17 -0.98 -4.09 16 17 C -0.69 0.52 5.86 -41.21 -0.24 0.28 16 18 C -0.08 0.13 10.70 29.04 0.31 0.44 16 19 S 0.16 -0.31 20.59 -107.50 -2.21 -2.52 16 20 C -0.23 0.29 5.70 -36.00 -0.21 0.09 16 21 C -0.03 0.06 2.96 36.01 0.11 0.16 16 22 O -0.52 0.46 12.88 -35.23 -0.45 0.01 16 23 Si 0.65 -1.33 30.98 -169.99 -5.27 -6.60 16 24 C -0.04 0.03 9.59 -41.21 -0.40 -0.37 16 25 C -0.15 0.57 7.25 -25.92 -0.19 0.38 16 26 C -0.09 0.15 8.59 -39.60 -0.34 -0.19 16 27 C -0.18 0.11 9.04 -39.45 -0.36 -0.25 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 31 H 0.14 -0.20 8.05 -52.49 -0.42 -0.63 16 32 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.10 -0.37 7.71 -51.93 -0.40 -0.77 16 34 H 0.42 -1.86 8.78 -34.47 -0.30 -2.17 16 35 H 0.19 -0.62 8.00 -52.48 -0.42 -1.04 16 36 H 0.13 -0.31 7.96 -51.93 -0.41 -0.72 16 37 H 0.38 -1.44 8.70 45.56 0.40 -1.04 16 38 H -0.23 -0.18 7.11 56.52 0.40 0.22 16 39 H -0.24 0.13 7.11 56.52 0.40 0.53 16 40 H 0.16 -0.15 7.96 -52.48 -0.42 -0.57 16 41 H 0.10 -0.44 6.32 -51.93 -0.33 -0.77 16 42 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 43 H 0.13 -0.52 6.67 -52.48 -0.35 -0.87 16 44 H 0.14 -0.37 6.30 -52.49 -0.33 -0.70 16 LS Contribution 398.58 15.07 6.01 6.01 Total: 0.00 -10.83 398.58 -12.44 -23.27 By element: Atomic # 1 Polarization: -8.33 SS G_CDS: -5.07 Total: -13.40 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -2.64 Total: -0.10 kcal Atomic # 7 Polarization: 3.07 SS G_CDS: -0.02 Total: 3.04 kcal Atomic # 8 Polarization: -6.16 SS G_CDS: -2.65 Total: -8.81 kcal Atomic # 9 Polarization: -0.60 SS G_CDS: 0.04 Total: -0.56 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.27 Total: -6.60 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.83 Total: -2.84 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -10.83 -12.44 -23.27 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9824368_15065232.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.391 kcal (2) G-P(sol) polarization free energy of solvation -10.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.218 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.439 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.266 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.657 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds