Wall clock time and date at job start Sat Mar 6 2021 00:21:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35955 * 116.99661 * 2 1 4 4 C 1.38910 * 120.06143 * 180.02562 * 3 2 1 5 5 F 1.35100 * 120.04947 * 0.02562 * 4 3 2 6 6 C 1.38336 * 119.90457 * 179.71849 * 4 3 2 7 7 C 1.38257 * 120.02643 * 0.51820 * 6 4 3 8 8 C 1.50698 * 119.93194 * 179.76487 * 7 6 4 9 9 H 1.09003 * 112.90326 * 190.97108 * 8 7 6 10 10 C 1.53780 * 113.61548 * 322.21942 * 8 7 6 11 11 C 1.53782 * 87.07904 * 139.98609 * 10 8 7 12 12 H 1.09003 * 113.60935 * 220.01934 * 11 10 8 13 13 N 1.46497 * 113.61439 * 89.11767 * 11 10 8 14 14 S 1.65605 * 120.00070 * 117.50020 * 13 11 10 15 15 O 1.42098 * 106.40354 * 178.53722 * 14 13 11 16 16 O 1.42097 * 106.40222 * 311.46354 * 14 13 11 17 17 C 1.76202 * 107.21485 * 64.99845 * 14 13 11 18 18 C 1.33396 * 122.54044 * 95.17077 * 17 14 13 19 19 C 1.50703 * 125.19888 * 0.02562 * 18 17 14 20 20 S 1.75884 * 109.59469 * 179.90398 * 18 17 14 21 21 C 1.75884 * 90.97052 * 0.29834 * 20 18 17 22 22 C 1.50703 * 125.20260 * 179.79288 * 21 20 18 23 23 C 1.33392 * 109.59361 * 359.83267 * 21 20 18 24 24 C 1.50696 * 122.53870 * 180.02562 * 23 21 20 25 25 O 1.42901 * 109.47447 * 66.42167 * 24 23 21 26 26 Si 1.86298 * 109.47111 * 306.42137 * 24 23 21 27 27 C 1.53775 * 113.61807 * 59.72037 * 8 7 6 28 28 C 1.38262 * 120.12758 * 359.48263 * 7 6 4 29 29 C 1.38181 * 120.09595 * 0.25633 * 28 7 6 30 30 H 1.08996 * 109.46610 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47211 * 299.99868 * 1 2 3 32 32 H 1.08993 * 109.47247 * 60.00463 * 1 2 3 33 33 H 1.08003 * 119.98645 * 180.25256 * 6 4 3 34 34 H 1.08994 * 113.61463 * 25.43702 * 10 8 7 35 35 H 1.09000 * 113.61414 * 254.53294 * 10 8 7 36 36 H 0.96999 * 120.00058 * 297.50163 * 13 11 10 37 37 H 1.08997 * 109.47040 * 84.30980 * 19 18 17 38 38 H 1.09002 * 109.47004 * 204.30994 * 19 18 17 39 39 H 1.08993 * 109.47286 * 324.31134 * 19 18 17 40 40 H 1.09001 * 109.46812 * 274.10933 * 22 21 20 41 41 H 1.08995 * 109.47024 * 34.10628 * 22 21 20 42 42 H 1.08998 * 109.46979 * 154.11102 * 22 21 20 43 43 H 1.08996 * 109.47338 * 186.42088 * 24 23 21 44 44 H 0.96705 * 114.00191 * 179.97438 * 25 24 23 45 45 H 1.48501 * 110.00393 * 307.13734 * 26 24 23 46 46 H 1.48503 * 110.00117 * 68.45393 * 26 24 23 47 47 H 1.09007 * 113.61815 * 105.46940 * 27 8 7 48 48 H 1.09003 * 113.61377 * 334.56564 * 27 8 7 49 49 H 1.08004 * 119.95134 * 180.28147 * 28 7 6 50 50 H 1.07996 * 120.01520 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2857 -0.0005 5 9 4.1714 0.1541 -0.0016 6 6 4.0579 2.5200 -0.0064 7 6 3.3022 3.6778 -0.0009 8 6 3.9849 5.0213 -0.0020 9 1 3.2992 5.8457 0.1937 10 6 5.2609 5.0646 0.8552 11 6 5.8863 5.9196 -0.2596 12 1 6.9277 5.6731 -0.4667 13 7 5.6634 7.3577 -0.0912 14 16 6.9521 8.3764 0.1186 15 8 6.4148 9.6883 0.2162 16 8 7.7652 7.7925 1.1270 17 6 7.8969 8.3351 -1.3682 18 6 7.7422 9.2337 -2.3418 19 6 6.7676 10.3828 -2.3166 20 16 8.8523 8.8743 -3.6579 21 6 9.4762 7.4775 -2.7901 22 6 10.5511 6.5498 -3.2952 23 6 8.8517 7.3642 -1.6168 24 6 9.1627 6.2632 -0.6360 25 8 10.4916 6.4303 -0.1378 26 14 9.0225 4.6133 -1.4896 27 6 4.8915 5.2507 -1.2227 28 6 1.9215 3.6053 -0.0004 29 6 1.2922 2.3751 0.0001 30 1 -0.3632 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8899 32 1 -0.3633 0.5137 -0.8900 33 1 5.1363 2.5793 -0.0110 34 1 5.7371 4.0920 0.9787 35 1 5.1361 5.5987 1.7972 36 1 4.7610 7.7132 -0.1025 37 1 7.2112 11.2238 -1.7837 38 1 6.5330 10.6828 -3.3379 39 1 5.8536 10.0730 -1.8099 40 1 10.1004 5.7752 -3.9156 41 1 11.2709 7.1157 -3.8865 42 1 11.0593 6.0877 -2.4489 43 1 8.4561 6.3047 0.1929 44 1 10.7601 5.7554 0.5006 45 1 7.7023 4.4987 -2.1598 46 1 10.1128 4.4628 -2.4865 47 1 4.4686 5.9350 -1.9583 48 1 5.2668 4.3289 -1.6673 49 1 1.3340 4.5116 -0.0007 50 1 0.2137 2.3200 0.0009 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_9824368_15065288.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:21:41 Heat of formation + Delta-G solvation = -77.967604 kcal Electronic energy + Delta-G solvation = -38497.018971 eV Core-core repulsion = 33433.414326 eV Total energy + Delta-G solvation = -5063.604645 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.101 amu Computer time = 2.26 seconds Orbital eigenvalues (eV) -49.68658 -41.55631 -40.53492 -40.18161 -38.52385 -38.16013 -37.11307 -36.90402 -34.38891 -34.23942 -31.79766 -31.09809 -30.98894 -28.60942 -28.16683 -26.87681 -26.11048 -25.76180 -23.90820 -23.14995 -22.82083 -21.04924 -20.55902 -19.92275 -19.44136 -19.23011 -18.54123 -18.15084 -17.90278 -17.73516 -17.37934 -17.14049 -17.00675 -16.36752 -16.26416 -16.01123 -15.97655 -15.71105 -15.65090 -15.33934 -15.17925 -15.04078 -14.68234 -14.54758 -14.44786 -14.29231 -14.12318 -13.93536 -13.75473 -13.72141 -13.68122 -13.41057 -13.28694 -13.23151 -13.13096 -12.98595 -12.86328 -12.80292 -12.56038 -12.44499 -12.28985 -12.14687 -12.08670 -11.72571 -11.60204 -11.42403 -11.32973 -10.69611 -10.30831 -10.02414 -9.97723 -9.49871 -9.12182 -5.08812 -0.79371 -0.45596 0.07044 0.14574 0.33487 0.63351 0.81002 1.24147 1.49188 1.87006 1.93767 2.10591 2.42701 2.63514 3.14220 3.18949 3.27681 3.29616 3.44228 3.46433 3.60071 3.60851 3.73656 3.75614 3.81855 3.89949 4.00302 4.04067 4.08090 4.09951 4.12085 4.17483 4.22960 4.37489 4.39580 4.44717 4.46063 4.49855 4.54455 4.58902 4.61432 4.71171 4.78168 4.84385 4.84507 4.90359 4.93693 4.99882 5.02040 5.05594 5.17991 5.22955 5.44896 5.56894 5.76397 6.22412 6.67063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.310 6.310 3 C 0.092 3.908 4 C 0.073 3.927 5 F -0.131 7.131 6 C -0.115 4.115 7 C -0.080 4.080 8 C -0.067 4.067 9 H 0.105 0.895 10 C -0.145 4.145 11 C 0.116 3.884 12 H 0.097 0.903 13 N -1.096 6.096 14 S 2.705 3.295 15 O -0.949 6.949 16 O -0.936 6.936 17 C -0.683 4.683 18 C -0.049 4.049 19 C -0.110 4.110 20 S 0.160 5.840 21 C -0.173 4.173 22 C -0.098 4.098 23 C -0.033 4.033 24 C -0.081 4.081 25 O -0.534 6.534 26 Si 0.644 3.356 27 C -0.139 4.139 28 C -0.083 4.083 29 C -0.179 4.179 30 H 0.104 0.896 31 H 0.059 0.941 32 H 0.058 0.942 33 H 0.145 0.855 34 H 0.102 0.898 35 H 0.087 0.913 36 H 0.421 0.579 37 H 0.102 0.898 38 H 0.081 0.919 39 H 0.098 0.902 40 H 0.075 0.925 41 H 0.077 0.923 42 H 0.097 0.903 43 H 0.101 0.899 44 H 0.384 0.616 45 H -0.244 1.244 46 H -0.226 1.226 47 H 0.082 0.918 48 H 0.099 0.901 49 H 0.132 0.868 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.216 -1.742 -1.821 4.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.223 6.223 3 C 0.046 3.954 4 C 0.054 3.946 5 F -0.109 7.109 6 C -0.133 4.133 7 C -0.081 4.081 8 C -0.086 4.086 9 H 0.123 0.877 10 C -0.184 4.184 11 C 0.009 3.991 12 H 0.114 0.886 13 N -0.855 5.855 14 S 2.793 3.207 15 O -0.940 6.940 16 O -0.926 6.926 17 C -0.782 4.782 18 C -0.170 4.170 19 C -0.168 4.168 20 S 0.426 5.574 21 C -0.291 4.291 22 C -0.156 4.156 23 C -0.043 4.043 24 C -0.193 4.193 25 O -0.340 6.340 26 Si 0.542 3.458 27 C -0.178 4.178 28 C -0.102 4.102 29 C -0.198 4.198 30 H 0.123 0.877 31 H 0.077 0.923 32 H 0.077 0.923 33 H 0.162 0.838 34 H 0.120 0.880 35 H 0.106 0.894 36 H 0.257 0.743 37 H 0.120 0.880 38 H 0.099 0.901 39 H 0.117 0.883 40 H 0.093 0.907 41 H 0.096 0.904 42 H 0.115 0.885 43 H 0.119 0.881 44 H 0.232 0.768 45 H -0.168 1.168 46 H -0.149 1.149 47 H 0.100 0.900 48 H 0.117 0.883 49 H 0.150 0.850 50 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -3.514 -0.793 -3.704 5.167 hybrid contribution -0.672 -0.124 0.462 0.825 sum -4.186 -0.917 -3.243 5.374 Atomic orbital electron populations 1.23153 0.77593 1.04604 1.01563 1.86159 1.21966 1.25677 1.88518 1.19072 0.90927 0.85806 0.99585 1.16941 0.85957 0.83052 1.08693 1.91525 1.76290 1.48915 1.94182 1.20865 1.01160 0.89665 1.01630 1.19393 0.93093 0.94035 1.01559 1.21503 0.95626 0.94247 0.97197 0.87718 1.23625 0.95444 1.00964 0.98347 1.21857 0.99748 0.79471 0.98063 0.88557 1.55402 1.23201 1.16615 1.90297 1.01721 0.72749 0.72759 0.73507 1.93611 1.78408 1.35821 1.86125 1.93565 1.67899 1.77384 1.53766 1.29458 1.18709 1.06032 1.23966 1.24594 0.98896 0.98094 0.95381 1.20918 0.97336 0.94558 1.04014 1.84394 1.31567 1.22414 1.18977 1.24453 1.04137 1.02054 0.98441 1.20784 0.95253 0.97042 1.02499 1.17534 0.96461 0.95557 0.94759 1.25098 0.89585 1.04189 1.00437 1.86455 1.27682 1.55915 1.63937 0.96379 0.82543 0.81387 0.85446 1.23518 0.96124 1.01661 0.96528 1.20921 0.93850 0.97340 0.98043 1.21169 1.00465 0.91440 1.06707 0.87720 0.92282 0.92341 0.83770 0.87992 0.89428 0.74336 0.87993 0.90064 0.88323 0.90650 0.90391 0.88486 0.88143 0.76820 1.16818 1.14948 0.89974 0.88308 0.84968 0.84373 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.69 10.36 -19.60 -0.20 -0.89 16 3 C 0.09 0.16 6.69 -39.18 -0.26 -0.10 16 4 C 0.07 0.15 7.31 -39.30 -0.29 -0.14 16 5 F -0.13 -0.50 17.11 2.25 0.04 -0.46 16 6 C -0.11 0.04 8.57 -39.54 -0.34 -0.30 16 7 C -0.08 0.11 5.29 -104.61 -0.55 -0.44 16 8 C -0.07 0.19 3.80 -90.96 -0.35 -0.15 16 9 H 0.10 -0.44 8.06 -51.93 -0.42 -0.85 16 10 C -0.14 0.37 7.25 -25.92 -0.19 0.18 16 11 C 0.12 -0.21 4.35 -67.12 -0.29 -0.50 16 12 H 0.10 -0.13 2.41 -51.93 -0.12 -0.26 16 13 N -1.10 1.74 5.73 -4.20 -0.02 1.71 16 14 S 2.71 5.11 5.32 -107.50 -0.57 4.53 16 15 O -0.95 -3.27 14.89 -57.17 -0.85 -4.12 16 16 O -0.94 -3.96 14.64 -57.17 -0.84 -4.80 16 17 C -0.68 -1.67 5.86 -41.21 -0.24 -1.91 16 18 C -0.05 -0.08 6.50 -36.00 -0.23 -0.31 16 19 C -0.11 0.03 8.89 36.01 0.32 0.35 16 20 S 0.16 0.20 23.31 -107.50 -2.51 -2.30 16 21 C -0.17 -0.43 6.10 -36.00 -0.22 -0.65 16 22 C -0.10 -0.11 8.10 36.01 0.29 0.18 16 23 C -0.03 -0.09 4.49 -106.25 -0.48 -0.57 16 24 C -0.08 -0.11 1.77 36.00 0.06 -0.05 16 25 O -0.53 -0.86 11.87 -35.23 -0.42 -1.28 16 26 Si 0.64 -0.66 27.67 -169.99 -4.70 -5.37 16 27 C -0.14 0.36 7.33 -25.92 -0.19 0.17 16 28 C -0.08 0.12 9.70 -39.59 -0.38 -0.26 16 29 C -0.18 0.11 9.04 -39.45 -0.36 -0.25 16 30 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 31 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 32 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 33 H 0.14 -0.33 6.67 -52.48 -0.35 -0.68 16 34 H 0.10 -0.37 6.32 -51.93 -0.33 -0.70 16 35 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.42 -1.67 8.78 -34.47 -0.30 -1.97 16 37 H 0.10 -0.01 8.14 -51.93 -0.42 -0.44 16 38 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 39 H 0.10 -0.08 6.46 -51.93 -0.34 -0.42 16 40 H 0.07 0.03 7.04 -51.93 -0.37 -0.33 16 41 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 42 H 0.10 0.12 5.16 -51.93 -0.27 -0.14 16 43 H 0.10 0.11 3.21 -51.93 -0.17 -0.06 16 44 H 0.38 -1.21 8.74 45.56 0.40 -0.81 16 45 H -0.24 0.00 7.04 56.52 0.40 0.40 16 46 H -0.23 -0.06 4.99 56.52 0.28 0.22 16 47 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 48 H 0.10 -0.24 7.71 -51.93 -0.40 -0.64 16 49 H 0.13 -0.47 8.05 -52.48 -0.42 -0.89 16 50 H 0.14 -0.36 6.30 -52.49 -0.33 -0.70 16 LS Contribution 412.85 15.07 6.22 6.22 Total: 0.00 -10.42 412.85 -12.63 -23.05 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -6.07 Total: -12.49 kcal Atomic # 6 Polarization: -1.10 SS G_CDS: -2.70 Total: -3.80 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -0.02 Total: 1.71 kcal Atomic # 8 Polarization: -8.78 SS G_CDS: -2.31 Total: -11.09 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.04 Total: -0.46 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -4.70 Total: -5.37 kcal Atomic # 16 Polarization: 5.31 SS G_CDS: -3.08 Total: 2.23 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -10.42 -12.63 -23.05 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9824368_15065288.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.922 kcal (2) G-P(sol) polarization free energy of solvation -10.421 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.343 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.27 seconds