Wall clock time and date at job start Sat Mar 6 2021 00:21:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35955 * 116.99661 * 2 1 4 4 C 1.38910 * 120.06143 * 180.02562 * 3 2 1 5 5 F 1.35100 * 120.04947 * 0.02562 * 4 3 2 6 6 C 1.38336 * 119.90457 * 179.71849 * 4 3 2 7 7 C 1.38257 * 120.02643 * 0.51820 * 6 4 3 8 8 C 1.50698 * 119.93194 * 179.76487 * 7 6 4 9 9 H 1.09003 * 112.90326 * 190.97108 * 8 7 6 10 10 C 1.53780 * 113.61548 * 322.21942 * 8 7 6 11 11 C 1.53782 * 87.07904 * 139.98609 * 10 8 7 12 12 H 1.09003 * 113.60935 * 220.01934 * 11 10 8 13 13 N 1.46497 * 113.61439 * 89.11767 * 11 10 8 14 14 S 1.65605 * 120.00070 * 117.50020 * 13 11 10 15 15 O 1.42098 * 106.40354 * 178.53722 * 14 13 11 16 16 O 1.42097 * 106.40222 * 311.46354 * 14 13 11 17 17 C 1.76202 * 107.21485 * 64.99845 * 14 13 11 18 18 C 1.33396 * 122.54044 * 95.17077 * 17 14 13 19 19 C 1.50703 * 125.19888 * 0.02562 * 18 17 14 20 20 S 1.75884 * 109.59469 * 179.90398 * 18 17 14 21 21 C 1.75884 * 90.97052 * 0.29834 * 20 18 17 22 22 C 1.50703 * 125.20260 * 179.79288 * 21 20 18 23 23 C 1.33392 * 109.59361 * 359.83267 * 21 20 18 24 24 C 1.50696 * 122.53870 * 180.02562 * 23 21 20 25 25 O 1.42901 * 109.47447 * 66.42167 * 24 23 21 26 26 Si 1.86298 * 109.47111 * 306.42137 * 24 23 21 27 27 C 1.53775 * 113.61807 * 59.72037 * 8 7 6 28 28 C 1.38262 * 120.12758 * 359.48263 * 7 6 4 29 29 C 1.38181 * 120.09595 * 0.25633 * 28 7 6 30 30 H 1.08996 * 109.46610 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47211 * 299.99868 * 1 2 3 32 32 H 1.08993 * 109.47247 * 60.00463 * 1 2 3 33 33 H 1.08003 * 119.98645 * 180.25256 * 6 4 3 34 34 H 1.08994 * 113.61463 * 25.43702 * 10 8 7 35 35 H 1.09000 * 113.61414 * 254.53294 * 10 8 7 36 36 H 0.96999 * 120.00058 * 297.50163 * 13 11 10 37 37 H 1.08997 * 109.47040 * 84.30980 * 19 18 17 38 38 H 1.09002 * 109.47004 * 204.30994 * 19 18 17 39 39 H 1.08993 * 109.47286 * 324.31134 * 19 18 17 40 40 H 1.09001 * 109.46812 * 274.10933 * 22 21 20 41 41 H 1.08995 * 109.47024 * 34.10628 * 22 21 20 42 42 H 1.08998 * 109.46979 * 154.11102 * 22 21 20 43 43 H 1.08996 * 109.47338 * 186.42088 * 24 23 21 44 44 H 0.96705 * 114.00191 * 179.97438 * 25 24 23 45 45 H 1.48501 * 110.00393 * 307.13734 * 26 24 23 46 46 H 1.48503 * 110.00117 * 68.45393 * 26 24 23 47 47 H 1.09007 * 113.61815 * 105.46940 * 27 8 7 48 48 H 1.09003 * 113.61377 * 334.56564 * 27 8 7 49 49 H 1.08004 * 119.95134 * 180.28147 * 28 7 6 50 50 H 1.07996 * 120.01520 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2857 -0.0005 5 9 4.1714 0.1541 -0.0016 6 6 4.0579 2.5200 -0.0064 7 6 3.3022 3.6778 -0.0009 8 6 3.9849 5.0213 -0.0020 9 1 3.2992 5.8457 0.1937 10 6 5.2609 5.0646 0.8552 11 6 5.8863 5.9196 -0.2596 12 1 6.9277 5.6731 -0.4667 13 7 5.6634 7.3577 -0.0912 14 16 6.9521 8.3764 0.1186 15 8 6.4148 9.6883 0.2162 16 8 7.7652 7.7925 1.1270 17 6 7.8969 8.3351 -1.3682 18 6 7.7422 9.2337 -2.3418 19 6 6.7676 10.3828 -2.3166 20 16 8.8523 8.8743 -3.6579 21 6 9.4762 7.4775 -2.7901 22 6 10.5511 6.5498 -3.2952 23 6 8.8517 7.3642 -1.6168 24 6 9.1627 6.2632 -0.6360 25 8 10.4916 6.4303 -0.1378 26 14 9.0225 4.6133 -1.4896 27 6 4.8915 5.2507 -1.2227 28 6 1.9215 3.6053 -0.0004 29 6 1.2922 2.3751 0.0001 30 1 -0.3632 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8899 32 1 -0.3633 0.5137 -0.8900 33 1 5.1363 2.5793 -0.0110 34 1 5.7371 4.0920 0.9787 35 1 5.1361 5.5987 1.7972 36 1 4.7610 7.7132 -0.1025 37 1 7.2112 11.2238 -1.7837 38 1 6.5330 10.6828 -3.3379 39 1 5.8536 10.0730 -1.8099 40 1 10.1004 5.7752 -3.9156 41 1 11.2709 7.1157 -3.8865 42 1 11.0593 6.0877 -2.4489 43 1 8.4561 6.3047 0.1929 44 1 10.7601 5.7554 0.5006 45 1 7.7023 4.4987 -2.1598 46 1 10.1128 4.4628 -2.4865 47 1 4.4686 5.9350 -1.9583 48 1 5.2668 4.3289 -1.6673 49 1 1.3340 4.5116 -0.0007 50 1 0.2137 2.3200 0.0009 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_9824368_15065288.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:21:40 Heat of formation + Delta-G solvation = -79.124991 kcal Electronic energy + Delta-G solvation = -38497.069159 eV Core-core repulsion = 33433.414326 eV Total energy + Delta-G solvation = -5063.654833 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.101 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -49.81834 -41.43411 -40.48725 -40.20544 -38.68126 -38.10060 -37.18523 -37.09967 -34.44326 -34.15292 -31.71932 -31.05320 -30.98064 -28.47021 -28.18187 -26.65369 -26.14173 -25.67168 -23.83632 -23.20245 -22.74463 -21.06085 -20.49302 -19.96039 -19.44577 -19.25527 -18.60788 -18.19558 -17.89091 -17.71832 -17.40137 -17.15252 -17.00142 -16.33144 -16.23439 -16.05209 -16.00814 -15.72407 -15.68630 -15.24932 -15.20987 -14.94399 -14.69719 -14.51402 -14.39548 -14.23884 -14.13070 -13.93460 -13.75830 -13.67873 -13.58953 -13.48070 -13.33397 -13.20411 -13.15502 -13.02865 -12.91512 -12.75564 -12.65025 -12.30719 -12.22805 -12.10741 -11.89832 -11.77882 -11.47859 -11.43547 -11.17153 -10.57514 -10.34362 -10.10857 -9.91625 -9.57323 -9.08703 -5.00685 -0.88289 -0.55805 0.13531 0.20396 0.26114 0.54400 0.72118 1.25560 1.55806 1.90942 1.91502 2.21148 2.50496 2.54017 3.09579 3.21525 3.29761 3.43305 3.55690 3.62013 3.64132 3.73380 3.76902 3.91893 3.93562 3.99232 3.99955 4.06991 4.16938 4.24913 4.27672 4.34931 4.35149 4.35395 4.45752 4.50217 4.53716 4.60499 4.68861 4.71793 4.80581 4.82236 4.87864 4.88692 4.93897 4.99573 5.03361 5.09390 5.10922 5.15244 5.17318 5.40911 5.60060 5.68046 5.99352 6.28868 6.84317 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.073 3.927 4 C 0.038 3.962 5 F -0.150 7.150 6 C -0.114 4.114 7 C -0.079 4.079 8 C -0.060 4.060 9 H 0.124 0.876 10 C -0.147 4.147 11 C 0.107 3.893 12 H 0.091 0.909 13 N -1.082 6.082 14 S 2.717 3.283 15 O -0.969 6.969 16 O -0.964 6.964 17 C -0.698 4.698 18 C -0.052 4.052 19 C -0.116 4.116 20 S 0.173 5.827 21 C -0.193 4.193 22 C -0.099 4.099 23 C -0.049 4.049 24 C -0.101 4.101 25 O -0.554 6.554 26 Si 0.714 3.286 27 C -0.137 4.137 28 C -0.080 4.080 29 C -0.180 4.180 30 H 0.113 0.887 31 H 0.070 0.930 32 H 0.070 0.930 33 H 0.158 0.842 34 H 0.111 0.889 35 H 0.087 0.913 36 H 0.433 0.567 37 H 0.099 0.901 38 H 0.101 0.899 39 H 0.104 0.896 40 H 0.081 0.919 41 H 0.085 0.915 42 H 0.093 0.907 43 H 0.100 0.900 44 H 0.401 0.599 45 H -0.256 1.256 46 H -0.244 1.244 47 H 0.090 0.910 48 H 0.097 0.903 49 H 0.159 0.841 50 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.473 -1.118 -2.218 6.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.027 3.973 4 C 0.018 3.982 5 F -0.129 7.129 6 C -0.133 4.133 7 C -0.080 4.080 8 C -0.079 4.079 9 H 0.142 0.858 10 C -0.186 4.186 11 C 0.000 4.000 12 H 0.109 0.891 13 N -0.844 5.844 14 S 2.805 3.195 15 O -0.959 6.959 16 O -0.954 6.954 17 C -0.797 4.797 18 C -0.173 4.173 19 C -0.174 4.174 20 S 0.439 5.561 21 C -0.311 4.311 22 C -0.157 4.157 23 C -0.060 4.060 24 C -0.211 4.211 25 O -0.364 6.364 26 Si 0.613 3.387 27 C -0.176 4.176 28 C -0.098 4.098 29 C -0.199 4.199 30 H 0.132 0.868 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.176 0.824 34 H 0.129 0.871 35 H 0.106 0.894 36 H 0.272 0.728 37 H 0.117 0.883 38 H 0.120 0.880 39 H 0.123 0.877 40 H 0.099 0.901 41 H 0.104 0.896 42 H 0.111 0.889 43 H 0.118 0.882 44 H 0.251 0.749 45 H -0.181 1.181 46 H -0.169 1.169 47 H 0.108 0.892 48 H 0.116 0.884 49 H 0.177 0.823 50 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -4.779 -0.155 -4.073 6.282 hybrid contribution -0.298 -0.274 0.584 0.711 sum -5.078 -0.429 -3.489 6.176 Atomic orbital electron populations 1.23381 0.75891 1.05650 1.02655 1.86110 1.23942 1.26524 1.88828 1.19351 0.91098 0.86439 1.00452 1.17384 0.86504 0.83292 1.10981 1.91460 1.76761 1.50054 1.94612 1.21077 1.02070 0.89192 1.00912 1.19595 0.93349 0.94244 1.00780 1.21554 0.95624 0.93922 0.96752 0.85822 1.23701 0.95610 1.01211 0.98117 1.21984 0.99866 0.79086 0.99076 0.89121 1.55063 1.22948 1.16410 1.90012 1.01151 0.72774 0.72446 0.73126 1.93577 1.78722 1.37158 1.86455 1.93531 1.68992 1.77818 1.55064 1.29544 1.19288 1.06553 1.24291 1.24890 0.98972 0.98217 0.95209 1.21059 0.97082 0.93811 1.05430 1.84253 1.31289 1.21878 1.18657 1.24701 1.04719 1.02862 0.98837 1.20830 0.95205 0.97150 1.02536 1.17838 0.96660 0.96199 0.95263 1.25454 0.89346 1.05572 1.00713 1.86400 1.27965 1.57262 1.64724 0.95592 0.80632 0.78959 0.83512 1.23524 0.95792 1.01632 0.96686 1.21291 0.94045 0.97960 0.96499 1.21431 1.01396 0.90983 1.06083 0.86839 0.91146 0.91190 0.82418 0.87126 0.89423 0.72813 0.88257 0.87998 0.87744 0.90086 0.89632 0.88857 0.88217 0.74860 1.18112 1.16926 0.89163 0.88424 0.82334 0.82478 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 113.37 1.11 1.05 16 2 O -0.34 -1.90 10.36 -93.05 -0.96 -2.87 16 3 C 0.07 0.30 6.69 22.53 0.15 0.45 16 4 C 0.04 0.20 7.31 22.45 0.16 0.37 16 5 F -0.15 -1.46 17.11 44.97 0.77 -0.69 16 6 C -0.11 0.07 8.57 22.30 0.19 0.26 16 7 C -0.08 0.31 5.29 -19.85 -0.11 0.21 16 8 C -0.06 0.45 3.80 -11.02 -0.04 0.41 16 9 H 0.12 -1.38 8.06 -2.39 -0.02 -1.40 16 10 C -0.15 0.91 7.25 31.12 0.23 1.13 16 11 C 0.11 -0.45 4.35 45.52 0.20 -0.26 16 12 H 0.09 -0.26 2.41 -2.39 -0.01 -0.27 16 13 N -1.08 4.03 5.73 -167.20 -0.96 3.07 16 14 S 2.72 11.34 5.32 -56.49 -0.30 11.04 16 15 O -0.97 -6.99 14.89 -128.00 -1.91 -8.89 16 16 O -0.96 -9.03 14.64 -128.00 -1.87 -10.90 16 17 C -0.70 -3.75 5.86 21.22 0.12 -3.63 16 18 C -0.05 -0.17 6.50 24.59 0.16 -0.01 16 19 C -0.12 0.10 8.89 71.24 0.63 0.73 16 20 S 0.17 0.46 23.31 -56.49 -1.32 -0.86 16 21 C -0.19 -1.06 6.10 24.59 0.15 -0.91 16 22 C -0.10 -0.27 8.10 71.24 0.58 0.31 16 23 C -0.05 -0.31 4.49 -20.92 -0.09 -0.41 16 24 C -0.10 -0.34 1.77 71.23 0.13 -0.21 16 25 O -0.55 -2.28 11.87 -148.98 -1.77 -4.05 16 26 Si 0.71 -1.43 27.67 68.60 1.90 0.47 16 27 C -0.14 0.88 7.33 31.12 0.23 1.11 16 28 C -0.08 0.38 9.70 22.26 0.22 0.59 16 29 C -0.18 0.35 9.04 22.36 0.20 0.56 16 30 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 31 H 0.07 -0.45 7.66 -2.39 -0.02 -0.47 16 32 H 0.07 -0.45 7.66 -2.39 -0.02 -0.47 16 33 H 0.16 -0.73 6.67 -2.91 -0.02 -0.75 16 34 H 0.11 -0.89 6.32 -2.39 -0.02 -0.90 16 35 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 36 H 0.43 -3.93 8.78 -96.74 -0.85 -4.78 16 37 H 0.10 -0.01 8.14 -2.39 -0.02 -0.03 16 38 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 39 H 0.10 -0.22 6.46 -2.39 -0.02 -0.24 16 40 H 0.08 0.09 7.04 -2.39 -0.02 0.08 16 41 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 42 H 0.09 0.31 5.16 -2.39 -0.01 0.29 16 43 H 0.10 0.29 3.21 -2.39 -0.01 0.28 16 44 H 0.40 -2.22 8.74 -74.05 -0.65 -2.87 16 45 H -0.26 0.08 7.04 99.48 0.70 0.78 16 46 H -0.24 -0.18 4.99 99.48 0.50 0.32 16 47 H 0.09 -0.70 8.14 -2.38 -0.02 -0.72 16 48 H 0.10 -0.56 7.71 -2.39 -0.02 -0.58 16 49 H 0.16 -1.62 8.05 -2.91 -0.02 -1.65 16 50 H 0.16 -1.05 6.30 -2.91 -0.02 -1.07 16 Total: 0.00 -25.31 412.85 -2.83 -28.14 By element: Atomic # 1 Polarization: -15.59 SS G_CDS: -0.63 Total: -16.21 kcal Atomic # 6 Polarization: -2.46 SS G_CDS: 4.22 Total: 1.75 kcal Atomic # 7 Polarization: 4.03 SS G_CDS: -0.96 Total: 3.07 kcal Atomic # 8 Polarization: -20.20 SS G_CDS: -6.51 Total: -26.71 kcal Atomic # 9 Polarization: -1.46 SS G_CDS: 0.77 Total: -0.69 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: 1.90 Total: 0.47 kcal Atomic # 16 Polarization: 11.80 SS G_CDS: -1.62 Total: 10.18 kcal Total: -25.31 -2.83 -28.14 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_9824368_15065288.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.990 kcal (2) G-P(sol) polarization free energy of solvation -25.307 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.297 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.828 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.135 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.125 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds