Wall clock time and date at job start Fri Mar 5 2021 23:23:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38319 * 119.97900 * 2 1 4 4 Br 1.89095 * 119.95562 * 359.97156 * 3 2 1 5 5 C 1.38368 * 120.08922 * 179.97438 * 3 2 1 6 6 C 1.38122 * 120.04732 * 359.97438 * 5 3 2 7 7 C 1.38748 * 119.95046 * 359.97438 * 6 5 3 8 8 O 1.35924 * 120.04188 * 179.97438 * 7 6 5 9 9 C 1.42900 * 116.99624 * 0.02562 * 8 7 6 10 10 C 1.53005 * 109.46573 * 179.97438 * 9 8 7 11 11 C 1.53574 * 109.12459 * 66.45705 * 10 9 8 12 12 C 1.55913 * 109.50764 * 169.52122 * 11 10 9 13 13 Si 1.89659 * 99.33494 * 319.37648 * 12 11 10 14 14 C 1.86294 * 111.45900 * 138.35773 * 13 12 11 15 15 C 1.86303 * 111.45620 * 263.30489 * 13 12 11 16 16 C 1.55353 * 109.09270 * 188.23355 * 10 9 8 17 17 C 1.38171 * 119.97400 * 180.20336 * 2 1 3 18 18 C 1.50696 * 120.02232 * 0.05242 * 17 2 1 19 19 O 1.42908 * 109.47091 * 236.22980 * 18 17 2 20 20 Si 1.86299 * 109.47389 * 116.23259 * 18 17 2 21 21 H 1.48493 * 109.47265 * 53.94800 * 20 18 17 22 22 H 1.48500 * 109.47476 * 173.95273 * 20 18 17 23 23 H 1.48500 * 109.47076 * 293.95214 * 20 18 17 24 24 H 1.09004 * 109.46708 * 95.14983 * 1 2 3 25 25 H 1.08992 * 109.47342 * 215.15244 * 1 2 3 26 26 H 1.09004 * 109.46977 * 335.15492 * 1 2 3 27 27 H 1.08004 * 119.97490 * 179.97438 * 5 3 2 28 28 H 1.07990 * 120.02168 * 179.97438 * 6 5 3 29 29 H 1.08989 * 109.47486 * 60.00189 * 9 8 7 30 30 H 1.08997 * 109.47464 * 299.99330 * 9 8 7 31 31 H 1.09002 * 109.01976 * 307.35216 * 10 9 8 32 32 H 1.08998 * 109.47477 * 49.48993 * 11 10 9 33 33 H 1.09002 * 109.46780 * 289.54274 * 11 10 9 34 34 H 1.09000 * 111.42678 * 201.84740 * 12 11 10 35 35 H 1.09000 * 111.42629 * 76.90102 * 12 11 10 36 36 H 1.09001 * 109.46964 * 185.06185 * 14 13 12 37 37 H 1.09005 * 109.47224 * 65.06586 * 14 13 12 38 38 H 1.08999 * 109.47326 * 305.06238 * 14 13 12 39 39 H 1.09001 * 109.46796 * 294.92978 * 15 13 12 40 40 H 1.08998 * 109.47448 * 54.93295 * 15 13 12 41 41 H 1.08994 * 109.46953 * 174.93489 * 15 13 12 42 42 H 1.08997 * 111.07225 * 92.91311 * 16 10 9 43 43 H 1.09006 * 111.09591 * 328.90013 * 16 10 9 44 44 H 1.08998 * 109.47372 * 356.22907 * 18 17 2 45 45 H 0.96697 * 113.99796 * 300.00205 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1981 0.0000 4 35 1.2508 2.8347 -0.0008 5 6 3.5819 1.2008 0.0005 6 6 4.2758 0.0065 0.0016 7 6 3.5843 -1.1964 0.0027 8 8 4.2653 -2.3727 0.0032 9 6 5.6922 -2.2962 0.0032 10 6 6.2786 -3.7094 0.0045 11 6 5.9362 -4.3975 -1.3251 12 6 6.7443 -5.7251 -1.4476 13 14 8.4082 -5.1377 -0.7523 14 6 9.1638 -6.4131 0.3760 15 6 9.5855 -4.6595 -2.1147 16 6 7.8154 -3.6217 0.2147 17 6 2.1973 -1.1969 -0.0042 18 6 1.4438 -2.5019 -0.0101 19 8 1.8533 -3.2934 1.1071 20 14 1.8068 -3.4217 -1.5890 21 1 3.2758 -3.5628 -1.7531 22 1 1.1834 -4.7683 -1.5320 23 1 1.2504 -2.6670 -2.7406 24 1 -0.3633 -0.0922 -1.0236 25 1 -0.3633 -0.8402 0.5916 26 1 -0.3633 0.9326 0.4318 27 1 4.1197 2.1374 0.0001 28 1 5.3557 0.0091 0.0016 29 1 6.0275 -1.7633 0.8928 30 1 6.0276 -1.7642 -0.8871 31 1 5.8373 -4.2764 0.8241 32 1 6.1943 -3.7372 -2.1530 33 1 4.8690 -4.6175 -1.3560 34 1 6.8362 -6.0409 -2.4868 35 1 6.3113 -6.5132 -0.8315 36 1 10.0702 -6.0084 0.8263 37 1 9.4110 -7.3058 -0.1986 38 1 8.4525 -6.6713 1.1604 39 1 9.8354 -5.5411 -2.7050 40 1 9.1155 -3.9139 -2.7561 41 1 10.4945 -4.2437 -1.6801 42 1 8.0719 -3.7060 1.2707 43 1 8.2179 -2.7031 -0.2122 44 1 0.3740 -2.3041 0.0575 45 1 2.7960 -3.5083 1.1124 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_16926656_18051908.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:23:23 Heat of formation + Delta-G solvation = -99.026999 kcal Electronic energy + Delta-G solvation = -24353.975804 eV Core-core repulsion = 20926.654186 eV Total energy + Delta-G solvation = -3427.321618 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 372.067 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.75676 -39.36100 -37.57546 -36.82684 -33.95179 -33.01416 -30.99557 -30.13779 -29.31591 -28.59180 -28.04435 -27.44486 -26.53829 -24.26405 -22.51757 -22.17636 -20.81111 -18.93713 -18.22834 -17.75314 -17.24294 -16.72797 -16.24979 -15.75476 -15.47189 -15.16032 -15.03124 -14.93632 -14.57254 -14.40760 -14.06739 -14.00957 -13.97165 -13.69783 -13.62645 -13.42003 -13.34876 -13.20194 -13.08103 -12.88060 -12.74824 -12.61049 -12.41518 -12.14848 -11.93938 -11.84417 -11.55407 -11.41955 -11.17733 -11.04366 -10.97768 -10.67779 -10.52104 -10.37325 -9.69259 -9.13076 0.05027 0.09441 0.70883 1.23964 1.46098 1.56670 1.62122 1.76308 1.79095 1.98189 2.08292 2.45105 2.46865 3.44182 3.56159 3.64044 3.72497 3.81470 3.89765 3.94784 4.00768 4.21844 4.25877 4.34529 4.39415 4.47044 4.50099 4.58621 4.60000 4.60939 4.63196 4.64600 4.65920 4.66406 4.68004 4.95784 4.99225 5.01500 5.09430 5.11989 5.22949 5.25666 5.31052 5.35077 5.41628 5.43858 5.52365 6.18301 6.67282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.003 4.003 3 C -0.130 4.130 4 Br -0.045 7.045 5 C -0.044 4.044 6 C -0.205 4.205 7 C 0.153 3.847 8 O -0.314 6.314 9 C 0.062 3.938 10 C -0.080 4.080 11 C -0.119 4.119 12 C -0.398 4.398 13 Si 0.967 3.033 14 C -0.443 4.443 15 C -0.442 4.442 16 C -0.394 4.394 17 C -0.145 4.145 18 C -0.068 4.068 19 O -0.536 6.536 20 Si 0.925 3.075 21 H -0.222 1.222 22 H -0.248 1.248 23 H -0.254 1.254 24 H 0.085 0.915 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.137 0.863 28 H 0.139 0.861 29 H 0.068 0.932 30 H 0.066 0.934 31 H 0.085 0.915 32 H 0.063 0.937 33 H 0.075 0.925 34 H 0.078 0.922 35 H 0.079 0.921 36 H 0.069 0.931 37 H 0.070 0.930 38 H 0.071 0.929 39 H 0.070 0.930 40 H 0.070 0.930 41 H 0.070 0.930 42 H 0.083 0.917 43 H 0.080 0.920 44 H 0.120 0.880 45 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.435 -1.061 -0.915 3.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C -0.005 4.005 3 C -0.210 4.210 4 Br 0.041 6.959 5 C -0.064 4.064 6 C -0.224 4.224 7 C 0.107 3.893 8 O -0.228 6.228 9 C -0.012 4.012 10 C -0.099 4.099 11 C -0.156 4.156 12 C -0.484 4.484 13 Si 1.165 2.835 14 C -0.551 4.551 15 C -0.551 4.551 16 C -0.480 4.480 17 C -0.147 4.147 18 C -0.178 4.178 19 O -0.343 6.343 20 Si 0.746 3.254 21 H -0.145 1.145 22 H -0.171 1.171 23 H -0.178 1.178 24 H 0.103 0.897 25 H 0.102 0.898 26 H 0.102 0.898 27 H 0.155 0.845 28 H 0.156 0.844 29 H 0.086 0.914 30 H 0.085 0.915 31 H 0.103 0.897 32 H 0.082 0.918 33 H 0.093 0.907 34 H 0.097 0.903 35 H 0.098 0.902 36 H 0.088 0.912 37 H 0.089 0.911 38 H 0.090 0.910 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.089 0.911 42 H 0.102 0.898 43 H 0.099 0.901 44 H 0.137 0.863 45 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges 2.610 -1.055 -1.531 3.205 hybrid contribution 0.869 0.359 0.303 0.988 sum 3.479 -0.696 -1.228 3.755 Atomic orbital electron populations 1.21196 0.89723 1.04736 1.03742 1.19375 0.96654 0.89951 0.94562 1.21605 0.94675 0.91458 1.13218 1.96709 1.75393 1.25994 1.97808 1.20917 0.91919 0.98559 0.95021 1.21192 1.00620 0.91377 1.09252 1.18774 0.90778 0.85265 0.94485 1.86008 1.21233 1.27674 1.87888 1.23178 0.76890 0.99252 1.01891 1.21545 0.95011 0.93780 0.99536 1.22066 1.01612 0.95827 0.96106 1.26673 1.15951 0.99468 1.06304 0.80516 0.67922 0.67541 0.67532 1.26016 1.07080 1.11772 1.10221 1.26016 1.10640 1.05608 1.12789 1.26661 0.97719 1.14858 1.08735 1.19472 0.90617 0.96102 1.08536 1.24850 1.01756 0.90592 1.00613 1.86487 1.30803 1.71545 1.45447 0.86092 0.83408 0.80334 0.75593 1.14486 1.17132 1.17805 0.89683 0.89819 0.89789 0.84535 0.84356 0.91368 0.91537 0.89651 0.91825 0.90661 0.90343 0.90227 0.91201 0.91072 0.90981 0.91064 0.91118 0.91122 0.89786 0.90107 0.86277 0.77331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.00 8.90 36.01 0.32 0.32 16 2 C 0.00 -0.01 5.88 -104.62 -0.62 -0.62 16 3 C -0.13 -0.23 6.22 -39.50 -0.25 -0.48 16 4 Br -0.04 -0.07 31.68 -68.01 -2.15 -2.22 16 5 C -0.04 -0.04 9.78 -39.58 -0.39 -0.42 16 6 C -0.20 -0.06 9.04 -39.44 -0.36 -0.42 16 7 C 0.15 0.16 6.08 -39.22 -0.24 -0.08 16 8 O -0.31 0.00 5.34 -30.50 -0.16 -0.16 16 9 C 0.06 -0.11 3.98 37.16 0.15 0.04 16 10 C -0.08 0.17 2.58 -89.07 -0.23 -0.06 16 11 C -0.12 0.15 5.06 -24.88 -0.13 0.03 16 12 C -0.40 0.80 5.95 38.71 0.23 1.03 16 13 Si 0.97 -3.44 13.35 -169.99 -2.27 -5.71 16 14 C -0.44 1.04 8.65 101.05 0.87 1.92 16 15 C -0.44 1.06 8.65 101.05 0.87 1.93 16 16 C -0.39 1.24 5.28 38.41 0.20 1.45 16 17 C -0.15 -0.24 4.50 -104.48 -0.47 -0.71 16 18 C -0.07 -0.08 2.62 36.00 0.09 0.02 16 19 O -0.54 -1.20 12.86 -46.23 -0.59 -1.79 16 20 Si 0.93 0.96 26.84 -169.99 -4.56 -3.61 16 21 H -0.22 -0.18 4.50 56.52 0.25 0.08 16 22 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 23 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 24 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 25 H 0.08 -0.06 6.34 -51.93 -0.33 -0.39 16 26 H 0.08 0.01 6.41 -51.93 -0.33 -0.33 16 27 H 0.14 -0.10 8.06 -52.48 -0.42 -0.53 16 28 H 0.14 -0.25 6.30 -52.49 -0.33 -0.58 16 29 H 0.07 -0.16 7.65 -51.94 -0.40 -0.56 16 30 H 0.07 -0.15 7.60 -51.93 -0.39 -0.55 16 31 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.06 -0.09 8.05 -51.93 -0.42 -0.51 16 33 H 0.07 -0.01 6.42 -51.93 -0.33 -0.34 16 34 H 0.08 -0.15 8.06 -51.93 -0.42 -0.57 16 35 H 0.08 -0.15 8.06 -51.93 -0.42 -0.57 16 36 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 37 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 38 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 39 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 40 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 41 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 42 H 0.08 -0.28 8.04 -51.93 -0.42 -0.70 16 43 H 0.08 -0.28 7.85 -51.93 -0.41 -0.69 16 44 H 0.12 -0.01 5.37 -51.93 -0.28 -0.29 16 45 H 0.38 0.16 6.60 45.56 0.30 0.46 16 LS Contribution 366.81 15.07 5.53 5.53 Total: 0.00 -3.78 366.81 -11.01 -14.79 By element: Atomic # 1 Polarization: -3.91 SS G_CDS: -6.87 Total: -10.78 kcal Atomic # 6 Polarization: 3.88 SS G_CDS: 0.08 Total: 3.95 kcal Atomic # 8 Polarization: -1.19 SS G_CDS: -0.76 Total: -1.95 kcal Atomic # 14 Polarization: -2.49 SS G_CDS: -6.83 Total: -9.32 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.15 Total: -2.22 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -3.78 -11.01 -14.79 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_16926656_18051908.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.242 kcal (2) G-P(sol) polarization free energy of solvation -3.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.019 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.008 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.785 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.027 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds