Wall clock time and date at job start Fri Mar 5 2021 23:43:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52999 * 109.47391 * 2 1 4 4 C 1.52998 * 109.47504 * 239.99770 * 2 1 3 5 5 C 1.50705 * 109.46933 * 120.00230 * 2 1 3 6 6 C 1.38242 * 119.97239 * 359.97438 * 5 2 1 7 7 C 1.38284 * 120.11408 * 180.02562 * 6 5 2 8 8 C 1.38122 * 120.05269 * 359.97438 * 7 6 5 9 9 C 1.50707 * 120.02850 * 179.97438 * 8 7 6 10 10 O 1.42895 * 109.47171 * 105.02250 * 9 8 7 11 11 Si 1.86305 * 109.46717 * 345.02458 * 9 8 7 12 12 H 1.48497 * 109.47215 * 299.99634 * 11 9 8 13 13 H 1.48496 * 109.47512 * 59.99870 * 11 9 8 14 14 H 1.48504 * 109.47015 * 180.02562 * 11 9 8 15 15 C 1.38751 * 119.94922 * 359.97438 * 8 7 6 16 16 O 1.35900 * 120.06039 * 180.02562 * 15 8 7 17 17 C 1.42901 * 117.00200 * 179.97438 * 16 15 8 18 18 C 1.52995 * 109.47074 * 179.97438 * 17 16 15 19 19 C 1.53566 * 109.47643 * 293.54788 * 18 17 16 20 20 C 1.55147 * 111.29010 * 190.93802 * 19 18 17 21 21 Si 1.89333 * 101.34989 * 28.58791 * 20 19 18 22 22 C 1.86301 * 111.45813 * 114.13512 * 21 20 19 23 23 C 1.86297 * 111.45926 * 239.08100 * 21 20 19 24 24 C 1.56066 * 109.48114 * 173.43596 * 18 17 16 25 25 C 1.38164 * 119.97209 * 180.26052 * 5 2 1 26 26 H 1.08998 * 109.47673 * 300.00297 * 1 2 3 27 27 H 1.09005 * 109.47157 * 60.00133 * 1 2 3 28 28 H 1.09003 * 109.47489 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47190 * 179.97438 * 3 2 1 30 30 H 1.08994 * 109.47287 * 300.00116 * 3 2 1 31 31 H 1.09007 * 109.46777 * 59.99383 * 3 2 1 32 32 H 1.08999 * 109.47368 * 300.00271 * 4 2 1 33 33 H 1.09000 * 109.46958 * 60.00360 * 4 2 1 34 34 H 1.09003 * 109.47428 * 180.02562 * 4 2 1 35 35 H 1.08005 * 119.94411 * 0.02562 * 6 5 2 36 36 H 1.07997 * 119.97609 * 179.97438 * 7 6 5 37 37 H 1.09000 * 109.47388 * 225.02603 * 9 8 7 38 38 H 0.96699 * 114.00524 * 180.02562 * 10 9 8 39 39 H 1.09007 * 109.46885 * 60.00180 * 17 16 15 40 40 H 1.09005 * 109.47062 * 300.00380 * 17 16 15 41 41 H 1.09004 * 109.46872 * 53.55317 * 18 17 16 42 42 H 1.09003 * 109.12206 * 70.45930 * 19 18 17 43 43 H 1.08996 * 109.12221 * 311.42400 * 19 18 17 44 44 H 1.09002 * 111.04815 * 270.56954 * 20 19 18 45 45 H 1.08999 * 111.04827 * 146.61077 * 20 19 18 46 46 H 1.09002 * 109.47148 * 185.06678 * 22 21 20 47 47 H 1.09001 * 109.46900 * 65.06830 * 22 21 20 48 48 H 1.09004 * 109.47198 * 305.06808 * 22 21 20 49 49 H 1.08995 * 109.47233 * 294.93123 * 23 21 20 50 50 H 1.08997 * 109.47080 * 54.93469 * 23 21 20 51 51 H 1.08998 * 109.47258 * 174.93080 * 23 21 20 52 52 H 1.08996 * 111.41269 * 43.11689 * 24 18 17 53 53 H 1.09006 * 111.49251 * 278.12945 * 24 18 17 54 54 H 1.08004 * 120.02980 * 359.97438 * 25 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 6 2.0322 -0.7105 1.2305 6 6 1.1334 -1.2352 2.1403 7 6 1.5910 -1.8872 3.2706 8 6 2.9481 -2.0162 3.4930 9 6 3.4463 -2.7264 4.7253 10 8 3.9326 -4.0209 4.3652 11 14 2.0504 -2.9049 5.9461 12 1 1.5451 -1.5596 6.3204 13 1 0.9522 -3.6926 5.3307 14 1 2.5414 -3.6042 7.1607 15 6 3.8525 -1.4914 2.5808 16 8 5.1882 -1.6175 2.7971 17 6 6.0604 -1.0534 1.8157 18 6 7.5143 -1.2919 2.2282 19 6 7.8216 -0.4954 3.5047 20 6 9.3428 -0.4841 3.8091 21 14 10.0722 -0.6445 2.0693 22 6 11.0050 0.8912 1.5771 23 6 11.1418 -2.1622 1.9159 24 6 8.4640 -0.8262 1.0806 25 6 3.3907 -0.8317 1.4513 26 1 -0.3634 0.5139 0.8899 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 3.1300 1.4424 0.0005 30 1 1.6767 1.9563 -0.8899 31 1 1.6766 1.9563 0.8900 32 1 1.6767 -1.7489 -1.2492 33 1 1.6768 -0.2074 -2.1392 34 1 3.1301 -0.7217 -1.2489 35 1 0.0718 -1.1357 1.9680 36 1 0.8869 -2.2959 3.9801 37 1 4.2524 -2.1482 5.1771 38 1 4.2696 -4.5361 5.1110 39 1 5.8760 0.0182 1.7388 40 1 5.8742 -1.5243 0.8504 41 1 7.6688 -2.3543 2.4167 42 1 7.2929 -0.9477 4.3438 43 1 7.4751 0.5302 3.3777 44 1 9.6239 -1.3338 4.4313 45 1 9.6421 0.4553 4.2740 46 1 11.3331 0.8008 0.5416 47 1 11.8738 1.0117 2.2243 48 1 10.3539 1.7596 1.6774 49 1 12.0114 -2.0609 2.5652 50 1 10.5690 -3.0416 2.2102 51 1 11.4707 -2.2719 0.8826 52 1 8.1441 0.1279 0.6619 53 1 8.5569 -1.5872 0.3056 54 1 4.0926 -0.4179 0.7424 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_16982346_18051908.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:43:10 Heat of formation + Delta-G solvation = -112.928079 kcal Electronic energy + Delta-G solvation = -28183.907798 eV Core-core repulsion = 24629.188530 eV Total energy + Delta-G solvation = -3554.719268 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 336.203 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.48514 -39.46164 -38.10723 -36.87841 -36.17785 -31.93291 -31.29286 -30.48536 -29.26367 -28.53729 -28.28100 -28.17634 -27.15868 -26.40244 -24.26734 -22.87045 -22.67117 -20.79873 -20.34198 -18.34592 -18.31571 -17.33337 -16.92856 -16.77916 -16.00543 -15.75969 -15.68595 -15.25818 -15.16967 -15.11241 -14.62326 -14.46669 -14.24188 -14.00708 -13.96754 -13.93177 -13.66778 -13.62829 -13.50394 -13.32379 -13.31370 -13.02409 -13.00200 -12.69030 -12.62453 -12.55776 -12.34797 -12.23584 -12.15259 -12.02720 -11.87714 -11.71839 -11.57230 -11.48295 -11.37319 -11.27225 -10.91309 -10.57792 -10.37085 -10.14030 -9.66777 -8.96954 0.34289 0.59648 1.23636 1.49705 1.54628 1.55591 1.83481 1.85560 1.96451 2.33204 2.53824 2.75501 3.50966 3.67140 3.75124 3.80546 3.98311 4.01705 4.05046 4.07301 4.16290 4.28496 4.30499 4.37716 4.45970 4.51323 4.55532 4.56626 4.65491 4.66354 4.68376 4.69494 4.70100 4.70788 4.71633 4.74917 4.77986 4.83122 4.95173 4.95556 5.02060 5.06783 5.10310 5.12645 5.18657 5.28175 5.32487 5.36379 5.39279 5.43837 5.46851 5.48659 5.49976 5.53425 5.74362 5.89940 6.56943 6.76424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.032 4.032 3 C -0.139 4.139 4 C -0.139 4.139 5 C -0.024 4.024 6 C -0.156 4.156 7 C -0.082 4.082 8 C -0.116 4.116 9 C -0.067 4.067 10 O -0.541 6.541 11 Si 0.942 3.058 12 H -0.249 1.249 13 H -0.248 1.248 14 H -0.257 1.257 15 C 0.162 3.838 16 O -0.302 6.302 17 C 0.066 3.934 18 C -0.082 4.082 19 C -0.108 4.108 20 C -0.398 4.398 21 Si 0.968 3.032 22 C -0.442 4.442 23 C -0.442 4.442 24 C -0.394 4.394 25 C -0.206 4.206 26 H 0.060 0.940 27 H 0.060 0.940 28 H 0.060 0.940 29 H 0.056 0.944 30 H 0.060 0.940 31 H 0.058 0.942 32 H 0.058 0.942 33 H 0.060 0.940 34 H 0.056 0.944 35 H 0.131 0.869 36 H 0.127 0.873 37 H 0.073 0.927 38 H 0.375 0.625 39 H 0.061 0.939 40 H 0.062 0.938 41 H 0.084 0.916 42 H 0.068 0.932 43 H 0.060 0.940 44 H 0.076 0.924 45 H 0.077 0.923 46 H 0.069 0.931 47 H 0.070 0.930 48 H 0.070 0.930 49 H 0.070 0.930 50 H 0.071 0.929 51 H 0.069 0.931 52 H 0.081 0.919 53 H 0.081 0.919 54 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.351 1.638 -0.626 2.214 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.032 4.032 3 C -0.196 4.196 4 C -0.196 4.196 5 C -0.024 4.024 6 C -0.174 4.174 7 C -0.100 4.100 8 C -0.117 4.117 9 C -0.177 4.177 10 O -0.346 6.346 11 Si 0.765 3.235 12 H -0.173 1.173 13 H -0.172 1.172 14 H -0.181 1.181 15 C 0.116 3.884 16 O -0.215 6.215 17 C -0.009 4.009 18 C -0.100 4.100 19 C -0.146 4.146 20 C -0.485 4.485 21 Si 1.165 2.835 22 C -0.550 4.550 23 C -0.550 4.550 24 C -0.479 4.479 25 C -0.225 4.225 26 H 0.079 0.921 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.075 0.925 30 H 0.080 0.920 31 H 0.077 0.923 32 H 0.077 0.923 33 H 0.080 0.920 34 H 0.075 0.925 35 H 0.149 0.851 36 H 0.145 0.855 37 H 0.091 0.909 38 H 0.222 0.778 39 H 0.079 0.921 40 H 0.080 0.920 41 H 0.103 0.897 42 H 0.087 0.913 43 H 0.079 0.921 44 H 0.095 0.905 45 H 0.096 0.904 46 H 0.088 0.912 47 H 0.089 0.911 48 H 0.089 0.911 49 H 0.089 0.911 50 H 0.090 0.910 51 H 0.088 0.912 52 H 0.100 0.900 53 H 0.100 0.900 54 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 0.639 1.674 -0.485 1.856 hybrid contribution 0.368 -0.065 0.032 0.375 sum 1.007 1.609 -0.453 1.951 Atomic orbital electron populations 1.21979 0.93806 1.02247 1.02228 1.19558 0.96010 0.95129 0.92523 1.21893 1.01070 0.94422 1.02203 1.21893 1.01082 1.00473 0.96162 1.19648 0.92405 0.95410 0.94952 1.21003 1.00130 1.01530 0.94746 1.20902 0.93710 0.97721 0.97677 1.18551 0.91927 1.03943 0.97251 1.24518 1.06141 0.86376 1.00692 1.86540 1.83856 1.26633 1.37587 0.85863 0.78582 0.81755 0.77283 1.17250 1.17207 1.18092 1.18667 0.83125 0.93740 0.92910 1.86127 1.13032 1.74606 1.47780 1.22979 0.89048 0.97812 0.91078 1.21675 0.91604 1.01690 0.95046 1.21698 0.95851 1.00061 0.96955 1.26505 1.01206 1.04477 1.16268 0.80505 0.67202 0.67560 0.68199 1.26012 1.08421 1.15022 1.05561 1.26013 1.09607 1.14834 1.04596 1.26832 1.14342 1.04161 1.02565 1.21063 0.96420 1.06054 0.98961 0.92066 0.92136 0.92059 0.92540 0.92046 0.92317 0.92300 0.92049 0.92542 0.85086 0.85510 0.90893 0.77788 0.92113 0.92015 0.89739 0.91304 0.92105 0.90528 0.90401 0.91153 0.91127 0.91074 0.91080 0.91004 0.91169 0.90050 0.90024 0.85354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.07 7.13 37.15 0.26 0.33 16 2 C -0.03 -0.01 0.85 -155.66 -0.13 -0.14 16 3 C -0.14 0.04 8.28 37.16 0.31 0.34 16 4 C -0.14 0.00 8.29 37.16 0.31 0.31 16 5 C -0.02 -0.05 4.76 -104.65 -0.50 -0.54 16 6 C -0.16 -0.32 8.97 -39.56 -0.36 -0.67 16 7 C -0.08 -0.22 8.66 -39.61 -0.34 -0.56 16 8 C -0.12 -0.41 5.31 -104.47 -0.55 -0.96 16 9 C -0.07 -0.13 2.37 36.01 0.09 -0.05 16 10 O -0.54 -1.31 12.86 -35.23 -0.45 -1.76 16 11 Si 0.94 0.77 25.49 -169.99 -4.33 -3.56 16 12 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 13 H -0.25 -0.41 6.73 56.52 0.38 -0.03 16 14 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 15 C 0.16 0.59 6.66 -39.21 -0.26 0.33 16 16 O -0.30 -0.99 9.25 -19.42 -0.18 -1.17 16 17 C 0.07 0.06 4.11 37.15 0.15 0.21 16 18 C -0.08 0.02 2.40 -88.69 -0.21 -0.20 16 19 C -0.11 0.00 5.21 -25.30 -0.13 -0.13 16 20 C -0.40 0.45 5.85 38.29 0.22 0.67 16 21 Si 0.97 -2.56 13.35 -169.99 -2.27 -4.83 16 22 C -0.44 0.78 8.65 101.05 0.87 1.65 16 23 C -0.44 0.69 8.65 101.05 0.87 1.57 16 24 C -0.39 0.68 5.30 38.80 0.21 0.88 16 25 C -0.21 -0.49 7.70 -39.43 -0.30 -0.79 16 26 H 0.06 -0.04 7.51 -51.93 -0.39 -0.43 16 27 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.06 -0.03 7.51 -51.93 -0.39 -0.42 16 29 H 0.06 -0.02 7.37 -51.93 -0.38 -0.40 16 30 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 0.01 8.14 -51.92 -0.42 -0.42 16 32 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 34 H 0.06 0.00 7.40 -51.93 -0.38 -0.39 16 35 H 0.13 0.04 5.89 -52.48 -0.31 -0.27 16 36 H 0.13 0.17 4.89 -52.49 -0.26 -0.09 16 37 H 0.07 0.09 7.83 -51.93 -0.41 -0.32 16 38 H 0.38 -0.77 8.74 45.56 0.40 -0.37 16 39 H 0.06 0.00 7.58 -51.93 -0.39 -0.39 16 40 H 0.06 0.04 7.68 -51.93 -0.40 -0.36 16 41 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 42 H 0.07 0.08 8.12 -51.93 -0.42 -0.35 16 43 H 0.06 -0.01 8.04 -51.93 -0.42 -0.42 16 44 H 0.08 -0.07 8.04 -51.93 -0.42 -0.49 16 45 H 0.08 -0.09 8.04 -51.93 -0.42 -0.51 16 46 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 47 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 48 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 49 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 50 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 51 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 52 H 0.08 -0.16 8.03 -51.93 -0.42 -0.58 16 53 H 0.08 -0.16 8.06 -51.93 -0.42 -0.57 16 54 H 0.13 0.12 5.34 -52.48 -0.28 -0.16 16 LS Contribution 413.74 15.07 6.23 6.23 Total: 0.00 -4.86 413.74 -10.03 -14.89 By element: Atomic # 1 Polarization: -2.51 SS G_CDS: -9.54 Total: -12.05 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: 0.50 Total: 2.25 kcal Atomic # 8 Polarization: -2.30 SS G_CDS: -0.63 Total: -2.93 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: -6.60 Total: -8.39 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -4.86 -10.03 -14.89 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_16982346_18051908.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.035 kcal (2) G-P(sol) polarization free energy of solvation -4.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.893 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds