Wall clock time and date at job start Sat Mar 6 2021 00:20:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35898 * 116.99519 * 2 1 4 4 C 1.38606 * 120.03063 * 0.27818 * 3 2 1 5 5 C 1.38657 * 119.89155 * 180.25072 * 4 3 2 6 6 O 1.35896 * 120.02952 * 179.74804 * 5 4 3 7 7 C 1.42896 * 116.99913 * 179.72240 * 6 5 4 8 8 C 1.53006 * 109.47051 * 180.02562 * 7 6 5 9 9 C 1.53571 * 109.12221 * 66.45352 * 8 7 6 10 10 C 1.55920 * 109.50277 * 169.52061 * 9 8 7 11 11 Si 1.89654 * 99.33841 * 319.37972 * 10 9 8 12 12 C 1.86301 * 111.45802 * 138.35691 * 11 10 9 13 13 C 1.86297 * 111.45852 * 263.30215 * 11 10 9 14 14 C 1.55354 * 109.09401 * 188.23816 * 8 7 6 15 15 C 1.38757 * 119.94550 * 359.47321 * 5 4 3 16 16 C 1.38198 * 120.05089 * 0.25013 * 15 5 4 17 17 C 1.38160 * 120.11172 * 0.02651 * 16 15 5 18 18 C 1.50694 * 119.97422 * 179.97438 * 17 16 15 19 19 O 1.42893 * 109.47485 * 104.99692 * 18 17 16 20 20 Si 1.86305 * 109.47040 * 344.99747 * 18 17 16 21 21 H 1.48498 * 109.47346 * 60.00296 * 20 18 17 22 22 H 1.48499 * 109.47341 * 180.02562 * 20 18 17 23 23 H 1.48506 * 109.47181 * 300.00002 * 20 18 17 24 24 H 1.09004 * 109.47109 * 60.00265 * 1 2 3 25 25 H 1.09005 * 109.46704 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.47212 * 299.99595 * 1 2 3 27 27 H 1.07999 * 120.05879 * 359.97334 * 4 3 2 28 28 H 1.09007 * 109.47408 * 60.00607 * 7 6 5 29 29 H 1.08996 * 109.47383 * 299.99988 * 7 6 5 30 30 H 1.09004 * 109.10610 * 307.30417 * 8 7 6 31 31 H 1.08995 * 109.47161 * 49.49977 * 9 8 7 32 32 H 1.09000 * 109.47347 * 289.54437 * 9 8 7 33 33 H 1.08998 * 111.42335 * 201.85232 * 10 9 8 34 34 H 1.08994 * 111.47224 * 76.92847 * 10 9 8 35 35 H 1.09002 * 109.47148 * 185.06573 * 12 11 10 36 36 H 1.09001 * 109.46900 * 65.06725 * 12 11 10 37 37 H 1.09004 * 109.47198 * 305.06703 * 12 11 10 38 38 H 1.08995 * 109.47233 * 294.93193 * 13 11 10 39 39 H 1.08997 * 109.47080 * 54.93539 * 13 11 10 40 40 H 1.08998 * 109.47258 * 174.93150 * 13 11 10 41 41 H 1.08995 * 111.07416 * 92.91832 * 14 8 7 42 42 H 1.08996 * 111.09205 * 328.89439 * 14 8 7 43 43 H 1.07996 * 119.97584 * 180.27807 * 15 5 4 44 44 H 1.08004 * 119.94539 * 179.97438 * 16 15 5 45 45 H 1.09001 * 109.47155 * 224.99851 * 18 17 16 46 46 H 0.96701 * 113.99943 * 300.00275 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2915 2.3737 0.0058 5 6 1.9238 3.6077 0.0005 6 8 1.1869 4.7495 0.0011 7 6 1.9050 5.9850 0.0016 8 6 0.9140 7.1507 0.0028 9 6 0.1471 7.1577 1.3332 10 6 -0.6666 8.4819 1.4581 11 14 0.6134 9.6964 0.7626 12 6 -0.1792 10.9512 -0.3634 13 6 1.5770 10.5251 2.1247 14 6 1.6918 8.4791 -0.2070 15 6 3.3097 3.6758 0.0005 16 6 4.0597 2.5149 0.0005 17 6 3.4319 1.2842 0.0000 18 6 4.2527 0.0204 -0.0006 19 8 4.2198 -0.5696 1.3004 20 14 6.0138 0.4239 -0.4552 21 1 6.5746 1.3777 0.5352 22 1 6.8225 -0.8216 -0.4564 23 1 6.0480 1.0370 -1.8074 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 0.2129 2.3188 0.0099 28 1 2.5317 6.0414 -0.8885 29 1 2.5318 6.0405 0.8916 30 1 0.2070 7.0188 -0.8163 31 1 0.8535 7.0860 2.1602 32 1 -0.5349 6.3080 1.3640 33 1 -0.9046 8.7064 2.4978 34 1 -1.5665 8.4567 0.8437 35 1 0.5934 11.5742 -0.8141 36 1 -0.8606 11.5772 0.2127 37 1 -0.7341 10.4363 -1.1477 38 1 0.9067 11.1485 2.7165 39 1 2.0273 9.7664 2.7647 40 1 2.3607 11.1454 1.6899 41 1 1.7323 8.7470 -1.2627 42 1 2.6934 8.4186 0.2186 43 1 3.8028 4.6366 0.0009 44 1 5.1383 2.5699 0.0000 45 1 3.8411 -0.6798 -0.7276 46 1 4.5718 -0.0011 1.9991 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_197680_18051908.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:20:29 Heat of formation + Delta-G solvation = -133.782122 kcal Electronic energy + Delta-G solvation = -23703.706457 eV Core-core repulsion = 20296.013555 eV Total energy + Delta-G solvation = -3407.692902 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.156 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.60872 -40.13774 -38.33505 -37.33937 -36.34446 -32.14248 -31.19552 -30.60719 -29.30004 -28.57336 -28.34514 -27.45080 -25.96228 -24.31536 -23.14392 -22.32325 -20.82959 -19.79042 -18.30748 -17.54287 -17.20725 -17.06608 -16.81201 -16.47030 -16.05645 -15.77285 -15.71354 -15.16118 -14.92533 -14.66314 -14.43228 -14.05874 -13.98510 -13.94973 -13.74887 -13.65069 -13.51661 -13.39907 -13.30628 -12.81207 -12.73236 -12.55963 -12.36085 -12.25359 -12.12139 -11.96364 -11.78881 -11.59067 -11.46617 -11.40296 -10.95610 -10.64791 -10.38919 -10.23994 -9.57908 -8.98255 0.29109 0.42718 1.23855 1.45524 1.49917 1.57814 1.79061 1.81650 1.97177 2.10481 2.38342 2.48974 2.67418 3.64540 3.65981 3.75349 3.90309 3.90924 4.00856 4.08833 4.13111 4.24212 4.27274 4.34529 4.41409 4.46484 4.49508 4.55731 4.60979 4.62779 4.63854 4.65200 4.65826 4.67403 4.69561 4.78603 5.02560 5.05309 5.10509 5.24905 5.33030 5.34299 5.34927 5.38289 5.44423 5.45715 5.57952 6.30440 6.47990 6.72513 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.299 6.299 3 C 0.195 3.805 4 C -0.247 4.247 5 C 0.178 3.822 6 O -0.311 6.311 7 C 0.063 3.937 8 C -0.080 4.080 9 C -0.112 4.112 10 C -0.397 4.397 11 Si 0.968 3.032 12 C -0.443 4.443 13 C -0.442 4.442 14 C -0.395 4.395 15 C -0.243 4.243 16 C -0.049 4.049 17 C -0.193 4.193 18 C -0.063 4.063 19 O -0.535 6.535 20 Si 0.947 3.053 21 H -0.253 1.253 22 H -0.253 1.253 23 H -0.250 1.250 24 H 0.057 0.943 25 H 0.103 0.897 26 H 0.058 0.942 27 H 0.139 0.861 28 H 0.065 0.935 29 H 0.065 0.935 30 H 0.082 0.918 31 H 0.063 0.937 32 H 0.071 0.929 33 H 0.078 0.922 34 H 0.078 0.922 35 H 0.069 0.931 36 H 0.070 0.930 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.070 0.930 40 H 0.070 0.930 41 H 0.082 0.918 42 H 0.080 0.920 43 H 0.132 0.868 44 H 0.131 0.869 45 H 0.115 0.885 46 H 0.372 0.628 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.341 3.569 -0.024 3.585 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.211 6.211 3 C 0.148 3.852 4 C -0.266 4.266 5 C 0.132 3.868 6 O -0.225 6.225 7 C -0.011 4.011 8 C -0.098 4.098 9 C -0.150 4.150 10 C -0.484 4.484 11 Si 1.166 2.834 12 C -0.551 4.551 13 C -0.550 4.550 14 C -0.481 4.481 15 C -0.262 4.262 16 C -0.067 4.067 17 C -0.194 4.194 18 C -0.173 4.173 19 O -0.340 6.340 20 Si 0.770 3.230 21 H -0.177 1.177 22 H -0.177 1.177 23 H -0.173 1.173 24 H 0.076 0.924 25 H 0.121 0.879 26 H 0.076 0.924 27 H 0.156 0.844 28 H 0.083 0.917 29 H 0.083 0.917 30 H 0.101 0.899 31 H 0.082 0.918 32 H 0.090 0.910 33 H 0.096 0.904 34 H 0.097 0.903 35 H 0.088 0.912 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.101 0.899 42 H 0.099 0.901 43 H 0.150 0.850 44 H 0.149 0.851 45 H 0.133 0.867 46 H 0.218 0.782 Dipole moment (debyes) X Y Z Total from point charges 0.126 3.133 -0.588 3.190 hybrid contribution -0.302 0.541 0.338 0.706 sum -0.176 3.673 -0.250 3.686 Atomic orbital electron populations 1.23154 0.78048 1.04372 1.01604 1.86191 1.21518 1.25853 1.87527 1.18407 0.91068 0.83805 0.91902 1.20438 1.00822 0.89624 1.15713 1.18669 0.89709 0.86073 0.92344 1.86081 1.35918 1.12686 1.87771 1.23120 0.95170 0.81203 1.01652 1.21527 0.96589 0.92221 0.99476 1.21917 0.98563 0.98445 0.96046 1.26670 1.07781 1.07676 1.06248 0.80501 0.68049 0.67364 0.67535 1.26018 1.07318 1.11553 1.10195 1.26010 1.08650 1.07587 1.12772 1.26677 1.06796 1.05907 1.08692 1.21083 0.92603 0.99552 1.12918 1.20723 0.99642 0.90990 0.95344 1.19512 0.91495 0.95812 1.12581 1.24729 1.08507 0.94863 0.89251 1.86552 1.86898 1.44373 1.16156 0.85783 0.75637 0.80453 0.81077 1.17731 1.17708 1.17338 0.92420 0.87853 0.92358 0.84362 0.91690 0.91710 0.89932 0.91815 0.91043 0.90352 0.90344 0.91194 0.91067 0.91027 0.91061 0.91083 0.91120 0.89886 0.90109 0.85027 0.85102 0.86714 0.78204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.30 -0.88 9.82 -19.42 -0.19 -1.07 16 3 C 0.19 0.59 6.66 -39.24 -0.26 0.33 16 4 C -0.25 -0.63 8.97 -39.29 -0.35 -0.99 16 5 C 0.18 0.45 6.68 -39.23 -0.26 0.19 16 6 O -0.31 -0.69 9.90 -19.41 -0.19 -0.88 16 7 C 0.06 -0.01 3.98 37.16 0.15 0.14 16 8 C -0.08 0.07 2.58 -89.07 -0.23 -0.16 16 9 C -0.11 0.07 5.06 -24.87 -0.13 -0.06 16 10 C -0.40 0.60 5.95 38.72 0.23 0.84 16 11 Si 0.97 -3.01 13.35 -169.99 -2.27 -5.28 16 12 C -0.44 0.89 8.65 101.05 0.87 1.76 16 13 C -0.44 0.93 8.65 101.05 0.87 1.80 16 14 C -0.40 0.93 5.28 38.41 0.20 1.13 16 15 C -0.24 -0.35 9.04 -39.40 -0.36 -0.71 16 16 C -0.05 -0.06 8.65 -39.62 -0.34 -0.41 16 17 C -0.19 -0.44 5.27 -104.45 -0.55 -0.99 16 18 C -0.06 -0.09 2.37 36.00 0.09 -0.01 16 19 O -0.54 -1.17 12.88 -35.23 -0.45 -1.63 16 20 Si 0.95 0.29 25.49 -169.99 -4.33 -4.04 16 21 H -0.25 0.05 6.73 56.52 0.38 0.43 16 22 H -0.25 -0.43 7.11 56.52 0.40 -0.02 16 23 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 24 H 0.06 -0.07 7.67 -51.93 -0.40 -0.47 16 25 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 26 H 0.06 -0.06 7.65 -51.93 -0.40 -0.46 16 27 H 0.14 0.19 6.30 -52.49 -0.33 -0.15 16 28 H 0.06 -0.05 7.65 -51.92 -0.40 -0.45 16 29 H 0.06 -0.06 7.59 -51.93 -0.39 -0.46 16 30 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.06 -0.05 8.05 -51.93 -0.42 -0.47 16 32 H 0.07 0.05 8.11 -51.93 -0.42 -0.37 16 33 H 0.08 -0.12 8.06 -51.93 -0.42 -0.54 16 34 H 0.08 -0.10 8.06 -51.93 -0.42 -0.52 16 35 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 37 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 38 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 39 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 40 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 41 H 0.08 -0.21 8.04 -51.93 -0.42 -0.63 16 42 H 0.08 -0.22 7.85 -51.93 -0.41 -0.63 16 43 H 0.13 -0.06 6.29 -52.49 -0.33 -0.39 16 44 H 0.13 -0.06 4.88 -52.48 -0.26 -0.32 16 45 H 0.11 0.18 7.83 -51.93 -0.41 -0.22 16 46 H 0.37 -0.47 8.70 45.56 0.40 -0.08 16 LS Contribution 366.77 15.07 5.53 5.53 Total: 0.00 -5.32 366.77 -8.14 -13.47 By element: Atomic # 1 Polarization: -2.79 SS G_CDS: -7.16 Total: -9.95 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: 0.93 Total: 3.86 kcal Atomic # 8 Polarization: -2.75 SS G_CDS: -0.84 Total: -3.58 kcal Atomic # 14 Polarization: -2.72 SS G_CDS: -6.60 Total: -9.32 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -5.32 -8.14 -13.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_197680_18051908.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.313 kcal (2) G-P(sol) polarization free energy of solvation -5.324 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.637 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.469 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds