Wall clock time and date at job start Sat Mar 6 2021 00:28:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35892 * 117.00410 * 2 1 4 4 C 1.38749 * 120.02427 * 359.97438 * 3 2 1 5 5 C 1.38208 * 120.05181 * 179.97438 * 4 3 2 6 6 C 1.38154 * 120.10892 * 359.97438 * 5 4 3 7 7 C 1.38790 * 120.05402 * 0.02562 * 6 5 4 8 8 O 1.35902 * 120.02757 * 179.97438 * 7 6 5 9 9 C 1.42896 * 116.99935 * 359.97438 * 8 7 6 10 10 C 1.52996 * 109.47308 * 180.02562 * 9 8 7 11 11 C 1.53570 * 109.12241 * 66.45680 * 10 9 8 12 12 C 1.55922 * 109.50531 * 169.52201 * 11 10 9 13 13 Si 1.89655 * 99.33569 * 319.37962 * 12 11 10 14 14 C 1.86295 * 111.45875 * 138.35773 * 13 12 11 15 15 C 1.86306 * 111.45722 * 263.30344 * 13 12 11 16 16 C 1.55356 * 109.09523 * 188.23875 * 10 9 8 17 17 C 1.38614 * 119.95036 * 0.22995 * 7 6 5 18 18 C 1.50694 * 120.05933 * 179.75049 * 17 7 6 19 19 O 1.42902 * 109.46856 * 234.80149 * 18 17 7 20 20 Si 1.86301 * 109.47522 * 114.79974 * 18 17 7 21 21 H 1.48496 * 109.47212 * 65.62720 * 20 18 17 22 22 H 1.48494 * 109.47024 * 185.62782 * 20 18 17 23 23 H 1.48505 * 109.46837 * 305.62790 * 20 18 17 24 24 H 1.09001 * 109.47334 * 300.00519 * 1 2 3 25 25 H 1.09001 * 109.46526 * 60.00208 * 1 2 3 26 26 H 1.08999 * 109.47500 * 180.02562 * 1 2 3 27 27 H 1.07997 * 119.97794 * 359.97438 * 4 3 2 28 28 H 1.07997 * 119.94345 * 179.97438 * 5 4 3 29 29 H 1.07994 * 119.97150 * 179.97438 * 6 5 4 30 30 H 1.09005 * 109.46741 * 60.00439 * 9 8 7 31 31 H 1.09000 * 109.47286 * 300.00604 * 9 8 7 32 32 H 1.09005 * 109.01953 * 307.35920 * 10 9 8 33 33 H 1.08995 * 109.47049 * 49.49872 * 11 10 9 34 34 H 1.08997 * 109.47453 * 289.54300 * 11 10 9 35 35 H 1.09003 * 111.42457 * 201.85074 * 12 11 10 36 36 H 1.08999 * 111.42736 * 76.90873 * 12 11 10 37 37 H 1.08997 * 109.46910 * 185.06476 * 14 13 12 38 38 H 1.09000 * 109.47005 * 65.06684 * 14 13 12 39 39 H 1.08999 * 109.47323 * 305.06933 * 14 13 12 40 40 H 1.09000 * 109.47118 * 294.93109 * 15 13 12 41 41 H 1.08998 * 109.47150 * 54.93313 * 15 13 12 42 42 H 1.09000 * 109.46584 * 174.93695 * 15 13 12 43 43 H 1.08998 * 111.07218 * 92.91593 * 16 10 9 44 44 H 1.08996 * 111.09152 * 328.89763 * 16 10 9 45 45 H 1.09003 * 109.47129 * 354.79483 * 18 17 7 46 46 H 0.96696 * 114.00340 * 65.39197 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2909 2.3748 -0.0005 5 6 1.9179 3.6065 0.0000 6 6 3.2974 3.6820 0.0016 7 6 4.0570 2.5205 0.0021 8 8 5.4140 2.5953 0.0032 9 6 5.9916 3.9024 0.0031 10 6 7.5171 3.7859 0.0037 11 6 7.9751 3.1694 -1.3261 12 6 9.5248 3.2893 -1.4492 13 14 9.7542 5.0388 -0.7536 14 6 11.2339 5.1352 0.3741 15 6 9.8599 6.3053 -2.1158 16 6 8.1344 5.1959 0.2140 17 6 3.4307 1.2839 -0.0037 18 6 4.2532 0.0212 -0.0089 19 8 3.8631 -0.7968 -1.1137 20 14 3.9739 -0.9084 1.5813 21 1 2.5649 -1.3733 1.6420 22 1 4.8845 -2.0801 1.6362 23 1 4.2496 -0.0127 2.7333 24 1 -0.3634 0.5139 0.8899 25 1 -0.3632 0.5138 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 0.2124 2.3184 -0.0014 28 1 1.3284 4.5114 -0.0008 29 1 3.7849 4.6456 0.0016 30 1 5.6677 4.4427 0.8927 31 1 5.6691 4.4421 -0.8873 32 1 7.8234 3.1355 0.8231 33 1 7.5028 3.6986 -2.1537 34 1 7.6885 2.1182 -1.3572 35 1 9.8475 3.2286 -2.4886 36 1 10.0319 2.5464 -0.8336 37 1 11.2833 6.1265 0.8246 38 1 12.1415 4.9519 -0.2010 39 1 11.1427 4.3837 1.1583 40 1 10.7588 6.1294 -2.7066 41 1 8.9821 6.2237 -2.7568 42 1 9.9007 7.3040 -1.6809 43 1 8.3261 5.3863 1.2700 44 1 7.4972 5.9706 -0.2124 45 1 5.3091 0.2757 -0.1003 46 1 4.0574 -0.4093 -1.9780 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_215219_18051908.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:28:49 Heat of formation + Delta-G solvation = -135.822284 kcal Electronic energy + Delta-G solvation = -24287.112830 eV Core-core repulsion = 20879.331460 eV Total energy + Delta-G solvation = -3407.781370 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.156 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.63988 -40.11440 -37.95588 -37.21436 -36.43807 -32.52396 -30.79641 -30.24312 -29.28374 -28.56203 -28.40315 -27.19257 -26.39458 -24.21628 -22.67581 -22.48255 -20.77150 -19.55983 -18.33516 -17.62740 -17.18111 -17.06820 -16.68652 -16.46620 -15.94981 -15.77807 -15.70380 -15.04135 -14.80838 -14.46282 -14.23076 -14.03929 -13.96423 -13.88093 -13.67747 -13.53108 -13.38998 -13.30439 -13.09004 -12.86683 -12.80391 -12.39782 -12.33034 -12.21700 -11.96329 -11.90984 -11.66684 -11.52183 -11.40599 -11.06127 -10.94162 -10.74558 -10.63396 -10.37080 -9.23704 -9.04938 0.31288 0.48948 1.49320 1.51333 1.74886 1.80558 1.82520 1.83271 1.98477 2.30256 2.48086 2.71433 2.76971 3.68426 3.73148 3.89989 3.92917 4.01957 4.04661 4.13298 4.20405 4.26567 4.29795 4.36177 4.42059 4.46502 4.53140 4.57647 4.63616 4.63974 4.65396 4.66220 4.67612 4.69009 4.70663 4.95063 5.04381 5.07157 5.22015 5.28208 5.33432 5.35583 5.39692 5.45831 5.46983 5.49277 5.56539 6.38339 6.48047 6.83709 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.293 6.293 3 C 0.181 3.819 4 C -0.248 4.248 5 C -0.035 4.035 6 C -0.248 4.248 7 C 0.181 3.819 8 O -0.309 6.309 9 C 0.064 3.936 10 C -0.080 4.080 11 C -0.112 4.112 12 C -0.397 4.397 13 Si 0.967 3.033 14 C -0.443 4.443 15 C -0.442 4.442 16 C -0.395 4.395 17 C -0.196 4.196 18 C -0.066 4.066 19 O -0.533 6.533 20 Si 1.007 2.993 21 H -0.239 1.239 22 H -0.258 1.258 23 H -0.258 1.258 24 H 0.056 0.944 25 H 0.057 0.943 26 H 0.102 0.898 27 H 0.131 0.869 28 H 0.129 0.871 29 H 0.130 0.870 30 H 0.065 0.935 31 H 0.064 0.936 32 H 0.083 0.917 33 H 0.063 0.937 34 H 0.072 0.928 35 H 0.078 0.922 36 H 0.078 0.922 37 H 0.069 0.931 38 H 0.070 0.930 39 H 0.071 0.929 40 H 0.070 0.930 41 H 0.070 0.930 42 H 0.069 0.931 43 H 0.082 0.918 44 H 0.080 0.920 45 H 0.078 0.922 46 H 0.362 0.638 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.185 3.680 -0.416 3.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.205 6.205 3 C 0.134 3.866 4 C -0.267 4.267 5 C -0.053 4.053 6 C -0.267 4.267 7 C 0.134 3.866 8 O -0.222 6.222 9 C -0.011 4.011 10 C -0.099 4.099 11 C -0.150 4.150 12 C -0.483 4.483 13 Si 1.165 2.835 14 C -0.551 4.551 15 C -0.550 4.550 16 C -0.480 4.480 17 C -0.198 4.198 18 C -0.175 4.175 19 O -0.337 6.337 20 Si 0.826 3.174 21 H -0.162 1.162 22 H -0.182 1.182 23 H -0.182 1.182 24 H 0.074 0.926 25 H 0.076 0.924 26 H 0.121 0.879 27 H 0.149 0.851 28 H 0.147 0.853 29 H 0.148 0.852 30 H 0.083 0.917 31 H 0.083 0.917 32 H 0.102 0.898 33 H 0.082 0.918 34 H 0.090 0.910 35 H 0.096 0.904 36 H 0.097 0.903 37 H 0.088 0.912 38 H 0.089 0.911 39 H 0.090 0.910 40 H 0.089 0.911 41 H 0.089 0.911 42 H 0.089 0.911 43 H 0.101 0.899 44 H 0.099 0.901 45 H 0.096 0.904 46 H 0.209 0.791 Dipole moment (debyes) X Y Z Total from point charges 0.104 2.515 0.821 2.647 hybrid contribution -0.307 1.283 -0.965 1.634 sum -0.203 3.797 -0.144 3.805 Atomic orbital electron populations 1.23135 0.78320 1.04313 1.01409 1.86277 1.21181 1.25635 1.87393 1.18452 0.90774 0.84783 0.92600 1.21175 1.00320 0.92077 1.13147 1.20751 0.93741 0.97237 0.93608 1.21147 0.94889 0.97452 1.13217 1.18353 0.82565 0.92528 0.93124 1.86041 1.16706 1.31599 1.87861 1.23122 0.93852 0.82441 1.01657 1.21537 0.91664 0.97144 0.99540 1.21919 0.95174 1.01858 0.96024 1.26668 0.98011 1.17422 1.06247 0.80508 0.67161 0.68303 0.67532 1.26016 1.14305 1.04545 1.10224 1.26014 1.04650 1.11574 1.12781 1.26671 1.15870 0.96819 1.08669 1.18781 0.91272 0.94203 1.15522 1.24827 0.98787 0.93020 1.00824 1.86735 1.85905 1.45414 1.15628 0.84553 0.81919 0.78369 0.72590 1.16155 1.18166 1.18166 0.92564 0.92412 0.87948 0.85072 0.85349 0.85203 0.91684 0.91740 0.89824 0.91842 0.90959 0.90357 0.90299 0.91218 0.91077 0.91006 0.91072 0.91097 0.91145 0.89887 0.90138 0.90434 0.79106 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.29 -0.97 7.34 -31.51 -0.23 -1.20 16 3 C 0.18 0.58 6.11 -39.24 -0.24 0.34 16 4 C -0.25 -0.40 9.04 -39.40 -0.36 -0.75 16 5 C -0.04 -0.03 10.04 -39.62 -0.40 -0.43 16 6 C -0.25 -0.35 9.04 -39.41 -0.36 -0.71 16 7 C 0.18 0.49 6.66 -39.24 -0.26 0.23 16 8 O -0.31 -0.62 8.67 -19.43 -0.17 -0.79 16 9 C 0.06 -0.02 3.98 37.16 0.15 0.13 16 10 C -0.08 0.08 2.58 -89.08 -0.23 -0.15 16 11 C -0.11 0.08 5.06 -24.87 -0.13 -0.04 16 12 C -0.40 0.62 5.95 38.72 0.23 0.85 16 13 Si 0.97 -3.00 13.35 -169.99 -2.27 -5.27 16 14 C -0.44 0.87 8.65 101.05 0.87 1.74 16 15 C -0.44 0.91 8.65 101.05 0.87 1.79 16 16 C -0.39 0.94 5.28 38.41 0.20 1.14 16 17 C -0.20 -0.67 4.49 -104.33 -0.47 -1.14 16 18 C -0.07 -0.21 2.63 36.00 0.09 -0.11 16 19 O -0.53 -1.77 11.83 -47.34 -0.56 -2.33 16 20 Si 1.01 3.56 26.99 -169.99 -4.59 -1.03 16 21 H -0.24 -1.05 6.45 56.52 0.36 -0.68 16 22 H -0.26 -1.00 7.11 56.52 0.40 -0.60 16 23 H -0.26 -0.95 7.11 56.52 0.40 -0.55 16 24 H 0.06 -0.08 7.66 -51.93 -0.40 -0.47 16 25 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 26 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 27 H 0.13 -0.05 6.29 -52.49 -0.33 -0.38 16 28 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 29 H 0.13 -0.05 6.29 -52.49 -0.33 -0.38 16 30 H 0.06 -0.05 7.65 -51.93 -0.40 -0.45 16 31 H 0.06 -0.07 7.59 -51.93 -0.39 -0.46 16 32 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.06 -0.06 8.05 -51.93 -0.42 -0.48 16 34 H 0.07 0.03 8.11 -51.93 -0.42 -0.39 16 35 H 0.08 -0.12 8.06 -51.93 -0.42 -0.54 16 36 H 0.08 -0.10 8.06 -51.93 -0.42 -0.52 16 37 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 38 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 39 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 41 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 42 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 43 H 0.08 -0.21 8.04 -51.93 -0.42 -0.63 16 44 H 0.08 -0.22 7.85 -51.93 -0.41 -0.63 16 45 H 0.08 0.18 6.83 -51.93 -0.35 -0.18 16 46 H 0.36 0.15 9.11 45.56 0.42 0.56 16 LS Contribution 366.17 15.07 5.52 5.52 Total: 0.00 -4.86 366.17 -8.59 -13.44 By element: Atomic # 1 Polarization: -4.93 SS G_CDS: -7.27 Total: -12.20 kcal Atomic # 6 Polarization: 2.88 SS G_CDS: 0.98 Total: 3.86 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.96 Total: -4.32 kcal Atomic # 14 Polarization: 0.56 SS G_CDS: -6.86 Total: -6.30 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -4.86 -8.59 -13.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_215219_18051908.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.379 kcal (2) G-P(sol) polarization free energy of solvation -4.855 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.234 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.443 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds