Wall clock time and date at job start Sat Mar 6 2021 00:38:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.36004 * 116.99997 * 2 1 4 4 C 1.38526 * 120.06272 * 0.23242 * 3 2 1 5 5 C 1.38281 * 120.00544 * 180.27692 * 4 3 2 6 6 C 1.50702 * 119.93043 * 179.76750 * 5 4 3 7 7 O 1.42903 * 109.47117 * 16.35713 * 6 5 4 8 8 Si 1.86299 * 109.46996 * 256.36063 * 6 5 4 9 9 H 1.48507 * 109.46930 * 185.41997 * 8 6 5 10 10 H 1.48499 * 109.46999 * 305.41356 * 8 6 5 11 11 H 1.48494 * 109.47642 * 65.41672 * 8 6 5 12 12 C 1.38289 * 120.14069 * 359.74378 * 5 4 3 13 13 Br 1.89094 * 119.93947 * 179.97438 * 12 5 4 14 14 C 1.38361 * 120.12390 * 0.02562 * 12 5 4 15 15 C 1.38523 * 119.99125 * 0.02562 * 14 12 5 16 16 O 1.35990 * 120.06874 * 179.97438 * 15 14 12 17 17 C 1.42907 * 116.99995 * 359.97438 * 16 15 14 18 18 C 1.53000 * 109.47146 * 179.97438 * 17 16 15 19 19 C 1.53571 * 109.11955 * 66.45888 * 18 17 16 20 20 C 1.55915 * 109.50598 * 169.52107 * 19 18 17 21 21 Si 1.89651 * 99.33505 * 319.37729 * 20 19 18 22 22 C 1.86299 * 111.46005 * 138.35797 * 21 20 19 23 23 C 1.86302 * 111.45993 * 263.30203 * 21 20 19 24 24 C 1.55350 * 109.09270 * 188.23380 * 18 17 16 25 25 H 1.08995 * 109.47210 * 300.00046 * 1 2 3 26 26 H 1.08991 * 109.47113 * 60.00593 * 1 2 3 27 27 H 1.09003 * 109.47131 * 180.02562 * 1 2 3 28 28 H 1.07997 * 119.99468 * 359.97438 * 4 3 2 29 29 H 1.08996 * 109.47192 * 136.35418 * 6 5 4 30 30 H 0.96700 * 114.00300 * 180.02562 * 7 6 5 31 31 H 1.07994 * 120.00461 * 179.97438 * 14 12 5 32 32 H 1.09006 * 109.46852 * 60.00348 * 17 16 15 33 33 H 1.08992 * 109.46978 * 300.00545 * 17 16 15 34 34 H 1.08995 * 109.02280 * 307.36304 * 18 17 16 35 35 H 1.08999 * 109.48030 * 49.49402 * 19 18 17 36 36 H 1.09005 * 109.47381 * 289.53701 * 19 18 17 37 37 H 1.09001 * 111.42833 * 201.85021 * 20 19 18 38 38 H 1.09003 * 111.43118 * 76.90802 * 20 19 18 39 39 H 1.09007 * 109.46938 * 185.06266 * 22 21 20 40 40 H 1.09003 * 109.47276 * 65.07001 * 22 21 20 41 41 H 1.08991 * 109.47235 * 305.06430 * 22 21 20 42 42 H 1.09005 * 109.47426 * 294.93436 * 23 21 20 43 43 H 1.09005 * 109.47272 * 54.92804 * 23 21 20 44 44 H 1.09002 * 109.47424 * 174.93438 * 23 21 20 45 45 H 1.09002 * 111.06772 * 92.92361 * 24 18 17 46 46 H 1.08996 * 111.09745 * 328.89927 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2118 0.0000 4 6 1.2933 2.3744 0.0049 5 6 1.9223 3.6059 -0.0009 6 6 1.1012 4.8696 -0.0009 7 8 -0.2408 4.5657 0.3848 8 14 1.1033 5.6114 -1.7098 9 1 0.4057 6.9222 -1.6813 10 1 2.5039 5.8060 -2.1633 11 1 0.4020 4.6978 -2.6471 12 6 3.3032 3.6803 -0.0062 13 35 4.1573 5.3673 -0.0149 14 6 4.0609 2.5226 -0.0063 15 6 3.4364 1.2862 -0.0016 16 8 4.1796 0.1474 -0.0022 17 6 5.6005 0.3000 -0.0083 18 6 6.2617 -1.0798 -0.0074 19 6 5.9510 -1.7873 -1.3345 20 6 6.8285 -3.0701 -1.4585 21 14 8.4614 -2.3934 -0.7711 22 6 9.2888 -3.6247 0.3559 23 6 9.6059 -1.8552 -2.1390 24 6 7.7923 -0.9096 0.1962 25 1 -0.3633 0.5138 0.8899 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 0.2148 2.3190 0.0082 29 1 1.5297 5.5812 0.7047 30 1 -0.8275 5.3341 0.4063 31 1 5.1392 2.5830 -0.0109 32 1 5.9105 0.8516 0.8793 33 1 5.9032 0.8478 -0.9007 34 1 5.8546 -1.6682 0.8148 35 1 6.1701 -1.1156 -2.1646 36 1 4.8970 -2.0643 -1.3607 37 1 6.9329 -3.3822 -2.4976 38 1 6.4408 -3.8792 -0.8396 39 1 10.1741 -3.1713 0.8019 40 1 9.5811 -4.5038 -0.2185 41 1 8.5955 -3.9193 1.1436 42 1 9.9001 -2.7231 -2.7292 43 1 9.0940 -1.1369 -2.7796 44 1 10.4932 -1.3907 -1.7088 45 1 8.0573 -0.9784 1.2512 46 1 8.1434 0.0284 -0.2337 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_2162974_18051908.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:38:10 Heat of formation + Delta-G solvation = -129.897713 kcal Electronic energy + Delta-G solvation = -25961.715375 eV Core-core repulsion = 22214.372910 eV Total energy + Delta-G solvation = -3747.342465 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 388.066 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.70808 -39.72078 -38.92879 -37.40350 -36.53698 -32.93257 -32.01989 -30.72813 -30.03273 -29.25201 -28.53025 -28.49105 -27.43205 -25.89866 -24.26729 -23.00546 -22.31668 -20.76168 -19.47022 -18.73807 -18.10077 -17.37807 -17.13315 -16.54402 -16.33827 -16.07870 -15.87425 -15.64273 -15.54641 -14.81301 -14.68906 -14.39614 -14.17972 -13.97732 -13.93456 -13.82056 -13.67208 -13.51065 -13.46768 -13.31328 -13.00735 -12.84822 -12.63885 -12.54326 -12.42279 -12.23822 -12.15460 -12.04323 -11.88057 -11.60737 -11.38916 -11.25047 -11.01596 -10.90460 -10.58586 -10.48943 -10.31669 -9.63523 -8.72288 0.03740 0.12890 0.58029 1.14807 1.43876 1.51661 1.55750 1.84787 1.87023 1.96011 2.19225 2.26749 2.52259 2.53951 3.04548 3.57349 3.71590 3.82566 3.94040 4.05162 4.07675 4.14655 4.26349 4.28736 4.35460 4.39167 4.49310 4.56416 4.57520 4.61858 4.66316 4.67269 4.69623 4.70753 4.72200 4.74093 4.80829 4.86482 5.09512 5.13043 5.22047 5.34349 5.39631 5.43539 5.47976 5.49958 5.52303 6.06843 6.46625 6.55249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.300 6.300 3 C 0.118 3.882 4 C -0.147 4.147 5 C -0.048 4.048 6 C -0.077 4.077 7 O -0.546 6.546 8 Si 0.916 3.084 9 H -0.243 1.243 10 H -0.225 1.225 11 H -0.246 1.246 12 C -0.091 4.091 13 Br -0.041 7.041 14 C -0.144 4.144 15 C 0.110 3.890 16 O -0.297 6.297 17 C 0.060 3.940 18 C -0.078 4.078 19 C -0.112 4.112 20 C -0.397 4.397 21 Si 0.966 3.034 22 C -0.442 4.442 23 C -0.442 4.442 24 C -0.395 4.395 25 H 0.059 0.941 26 H 0.058 0.942 27 H 0.103 0.897 28 H 0.156 0.844 29 H 0.087 0.913 30 H 0.385 0.615 31 H 0.147 0.853 32 H 0.064 0.936 33 H 0.064 0.936 34 H 0.083 0.917 35 H 0.063 0.937 36 H 0.073 0.927 37 H 0.077 0.923 38 H 0.078 0.922 39 H 0.069 0.931 40 H 0.070 0.930 41 H 0.071 0.929 42 H 0.070 0.930 43 H 0.070 0.930 44 H 0.069 0.931 45 H 0.082 0.918 46 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.077 0.429 -0.200 0.480 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.213 6.213 3 C 0.071 3.929 4 C -0.166 4.166 5 C -0.050 4.050 6 C -0.186 4.186 7 O -0.352 6.352 8 Si 0.734 3.266 9 H -0.166 1.166 10 H -0.147 1.147 11 H -0.169 1.169 12 C -0.171 4.171 13 Br 0.045 6.955 14 C -0.165 4.165 15 C 0.063 3.937 16 O -0.210 6.210 17 C -0.015 4.015 18 C -0.096 4.096 19 C -0.150 4.150 20 C -0.483 4.483 21 Si 1.164 2.836 22 C -0.551 4.551 23 C -0.550 4.550 24 C -0.480 4.480 25 H 0.078 0.922 26 H 0.076 0.924 27 H 0.122 0.878 28 H 0.173 0.827 29 H 0.105 0.895 30 H 0.233 0.767 31 H 0.165 0.835 32 H 0.082 0.918 33 H 0.082 0.918 34 H 0.102 0.898 35 H 0.081 0.919 36 H 0.091 0.909 37 H 0.096 0.904 38 H 0.097 0.903 39 H 0.088 0.912 40 H 0.089 0.911 41 H 0.090 0.910 42 H 0.089 0.911 43 H 0.089 0.911 44 H 0.089 0.911 45 H 0.101 0.899 46 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.721 0.412 -0.996 1.297 hybrid contribution -0.633 0.454 0.545 0.951 sum 0.088 0.866 -0.451 0.980 Atomic orbital electron populations 1.23168 0.77897 1.04419 1.01718 1.86210 1.21549 1.25251 1.88320 1.18373 0.89126 0.85575 0.99817 1.20856 1.01158 0.89567 1.05036 1.18777 0.90935 0.94462 1.00855 1.24739 0.84749 0.98218 1.10902 1.86372 1.18958 1.38008 1.91845 0.86082 0.84103 0.80261 0.76154 1.16647 1.14702 1.16864 1.21037 0.93247 0.91696 1.11146 1.96705 1.79214 1.22067 1.97530 1.20890 1.00567 0.89498 1.05497 1.18095 0.88285 0.85951 1.01330 1.86221 1.18957 1.27402 1.88440 1.23146 0.77704 0.99197 1.01460 1.21500 0.94383 0.94167 0.99594 1.21917 1.01196 0.95863 0.96006 1.26666 1.15276 1.00222 1.06138 0.80516 0.67862 0.67642 0.67554 1.26014 1.07555 1.11272 1.10213 1.26012 1.10273 1.05856 1.12844 1.26677 0.98508 1.14205 1.08659 0.92226 0.92356 0.87818 0.82696 0.89523 0.76717 0.83493 0.91801 0.91822 0.89850 0.91877 0.90851 0.90402 0.90347 0.91223 0.91097 0.91015 0.91097 0.91080 0.91144 0.89900 0.90115 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.99 16 2 O -0.30 -1.06 10.28 -34.25 -0.35 -1.42 16 3 C 0.12 0.42 6.70 -39.12 -0.26 0.16 16 4 C -0.15 -0.37 8.35 -39.46 -0.33 -0.70 16 5 C -0.05 -0.11 4.49 -104.59 -0.47 -0.58 16 6 C -0.08 -0.03 2.43 36.01 0.09 0.06 16 7 O -0.55 0.20 11.50 -35.23 -0.41 -0.20 16 8 Si 0.92 0.41 26.64 -169.99 -4.53 -4.12 16 9 H -0.24 0.01 7.11 56.52 0.40 0.41 16 10 H -0.23 -0.25 6.27 56.52 0.35 0.11 16 11 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 12 C -0.09 -0.21 5.96 -39.52 -0.24 -0.45 16 13 Br -0.04 -0.06 29.81 -68.01 -2.03 -2.09 16 14 C -0.14 -0.31 8.77 -39.43 -0.35 -0.66 16 15 C 0.11 0.38 6.70 -39.12 -0.26 0.12 16 16 O -0.30 -1.01 9.69 -34.21 -0.33 -1.34 16 17 C 0.06 0.04 3.98 37.16 0.15 0.18 16 18 C -0.08 0.01 2.58 -89.08 -0.23 -0.22 16 19 C -0.11 -0.02 5.06 -24.88 -0.13 -0.15 16 20 C -0.40 0.36 5.95 38.71 0.23 0.59 16 21 Si 0.97 -2.50 13.35 -169.99 -2.27 -4.77 16 22 C -0.44 0.69 8.65 101.05 0.87 1.57 16 23 C -0.44 0.73 8.65 101.05 0.87 1.61 16 24 C -0.40 0.70 5.28 38.40 0.20 0.90 16 25 H 0.06 -0.06 7.65 -51.93 -0.40 -0.45 16 26 H 0.06 -0.06 7.67 -51.93 -0.40 -0.46 16 27 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 28 H 0.16 0.21 5.39 -52.49 -0.28 -0.07 16 29 H 0.09 -0.05 7.14 -51.93 -0.37 -0.42 16 30 H 0.38 -1.80 8.74 45.56 0.40 -1.41 16 31 H 0.15 0.06 6.30 -52.49 -0.33 -0.28 16 32 H 0.06 -0.01 7.65 -51.93 -0.40 -0.41 16 33 H 0.06 -0.02 7.60 -51.93 -0.39 -0.42 16 34 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 35 H 0.06 -0.01 8.05 -51.93 -0.42 -0.43 16 36 H 0.07 0.13 8.11 -51.93 -0.42 -0.29 16 37 H 0.08 -0.08 8.06 -51.93 -0.42 -0.49 16 38 H 0.08 -0.05 8.06 -51.93 -0.42 -0.47 16 39 H 0.07 -0.11 7.96 -51.92 -0.41 -0.52 16 40 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 41 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 42 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 43 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 44 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 45 H 0.08 -0.17 8.04 -51.93 -0.42 -0.58 16 46 H 0.08 -0.18 7.85 -51.93 -0.41 -0.59 16 LS Contribution 385.49 15.07 5.81 5.81 Total: 0.00 -5.37 385.49 -9.80 -15.17 By element: Atomic # 1 Polarization: -3.60 SS G_CDS: -6.84 Total: -10.45 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: 1.15 Total: 3.41 kcal Atomic # 8 Polarization: -1.87 SS G_CDS: -1.09 Total: -2.96 kcal Atomic # 14 Polarization: -2.10 SS G_CDS: -6.80 Total: -8.90 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.03 Total: -2.09 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -5.37 -9.80 -15.17 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_2162974_18051908.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.729 kcal (2) G-P(sol) polarization free energy of solvation -5.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.096 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.802 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.169 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.898 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds