Wall clock time and date at job start Fri Mar 5 2021 23:38:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42898 * 109.47319 * 2 1 4 4 C 1.35897 * 117.00481 * 180.02562 * 3 2 1 5 5 C 1.38757 * 120.02287 * 359.97438 * 4 3 2 6 6 C 1.38193 * 120.05390 * 179.97438 * 5 4 3 7 7 C 1.38155 * 120.11004 * 0.02562 * 6 5 4 8 8 C 1.50698 * 119.97034 * 180.02562 * 7 6 5 9 9 O 1.42900 * 109.47272 * 104.99627 * 8 7 6 10 10 Si 1.86298 * 109.47504 * 344.99201 * 8 7 6 11 11 H 1.48503 * 109.46746 * 60.00101 * 10 8 7 12 12 H 1.48500 * 109.47324 * 180.02562 * 10 8 7 13 13 H 1.48495 * 109.47045 * 300.00582 * 10 8 7 14 14 C 1.38790 * 120.05167 * 359.97313 * 7 6 5 15 15 O 1.35900 * 120.02321 * 180.02562 * 14 7 6 16 16 C 1.42900 * 116.99698 * 180.02562 * 15 14 7 17 17 C 1.53007 * 109.46842 * 179.97438 * 16 15 14 18 18 C 1.53568 * 109.47286 * 66.45430 * 17 16 15 19 19 C 1.55152 * 111.28949 * 169.05696 * 18 17 16 20 20 Si 1.89326 * 101.35156 * 331.41557 * 19 18 17 21 21 C 1.86301 * 111.46224 * 120.84842 * 20 19 18 22 22 C 1.86296 * 111.45982 * 245.79915 * 20 19 18 23 23 C 1.55919 * 109.46978 * 186.50060 * 17 16 15 24 24 C 1.38610 * 119.94721 * 359.74859 * 14 7 6 25 25 H 1.09002 * 109.47153 * 300.00307 * 1 2 3 26 26 H 1.08998 * 109.47533 * 59.99936 * 1 2 3 27 27 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47153 * 239.99693 * 2 1 3 29 29 H 1.09001 * 109.46832 * 119.99884 * 2 1 3 30 30 H 1.07999 * 119.97216 * 359.97438 * 5 4 3 31 31 H 1.08007 * 119.94479 * 179.97438 * 6 5 4 32 32 H 1.09011 * 109.46859 * 224.99262 * 8 7 6 33 33 H 0.96697 * 114.00346 * 299.99816 * 9 8 7 34 34 H 1.08997 * 109.47217 * 299.99449 * 16 15 14 35 35 H 1.08996 * 109.47673 * 60.00102 * 16 15 14 36 36 H 1.08996 * 109.47153 * 306.44700 * 17 16 15 37 37 H 1.08992 * 109.12429 * 289.54388 * 18 17 16 38 38 H 1.09004 * 109.12446 * 48.57875 * 18 17 16 39 39 H 1.09001 * 111.04211 * 89.43073 * 19 18 17 40 40 H 1.08999 * 111.04647 * 213.35248 * 19 18 17 41 41 H 1.09008 * 109.46284 * 60.00222 * 21 20 19 42 42 H 1.09001 * 109.47097 * 179.97438 * 21 20 19 43 43 H 1.08993 * 109.47316 * 300.00274 * 21 20 19 44 44 H 1.09001 * 109.47620 * 59.99560 * 22 20 19 45 45 H 1.09003 * 109.47360 * 179.97438 * 22 20 19 46 46 H 1.09009 * 109.47025 * 299.99876 * 22 20 19 47 47 H 1.09004 * 111.42837 * 316.88267 * 23 17 16 48 48 H 1.08993 * 111.42915 * 81.82831 * 23 17 16 49 49 H 1.08005 * 120.05431 * 180.25384 * 24 14 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.3536 1.5254 -0.0005 5 6 4.1993 0.4253 -0.0005 6 6 5.5694 0.6057 -0.0016 7 6 6.1006 1.8811 -0.0022 8 6 7.5951 2.0742 -0.0039 9 8 8.0214 2.4810 -1.3058 10 14 8.4290 0.4712 0.4498 11 1 8.0638 -0.5741 -0.5397 12 1 9.9018 0.6617 0.4487 13 1 7.9860 0.0485 1.8026 14 6 5.2588 2.9846 -0.0022 15 8 5.7819 4.2389 -0.0033 16 6 4.8564 5.3277 -0.0027 17 6 5.6252 6.6505 -0.0035 18 6 6.3815 6.8023 -1.3314 19 6 6.9507 8.2364 -1.4947 20 14 5.7071 9.2479 -0.4875 21 6 6.5412 10.1636 0.9042 22 6 4.7351 10.4091 -1.5726 23 6 4.6238 7.8338 0.1636 24 6 3.8842 2.8062 -0.0070 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3635 -1.0276 0.0005 28 1 1.8933 -0.5139 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 3.7865 -0.5726 0.0003 31 1 6.2261 -0.2518 -0.0012 32 1 7.8632 2.8415 0.7224 33 1 7.8151 1.8446 -2.0040 34 1 4.2286 5.2714 -0.8920 35 1 4.2305 5.2722 0.8879 36 1 6.3363 6.6579 0.8226 37 1 7.2032 6.0867 -1.3581 38 1 5.7006 6.5923 -2.1562 39 1 7.9516 8.3110 -1.0696 40 1 6.9485 8.5416 -2.5411 41 1 7.2886 10.8435 0.4950 42 1 5.7976 10.7339 1.4610 43 1 7.0254 9.4495 1.5702 44 1 4.1882 9.8353 -2.3207 45 1 4.0306 10.9735 -0.9616 46 1 5.4176 11.0979 -2.0706 47 1 3.7366 7.6949 -0.4543 48 1 4.3574 7.9854 1.2096 49 1 3.2275 3.6637 -0.0112 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_26952_18051908.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:38:49 Heat of formation + Delta-G solvation = -139.641178 kcal Electronic energy + Delta-G solvation = -25887.719238 eV Core-core repulsion = 22324.234649 eV Total energy + Delta-G solvation = -3563.484589 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 324.172 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.61505 -40.12950 -38.56133 -37.05821 -36.40524 -33.16372 -31.36277 -31.21244 -30.37543 -29.23179 -28.50579 -27.31585 -26.18837 -24.83594 -24.18679 -22.80319 -22.13144 -20.69389 -19.82730 -18.22176 -17.63768 -17.26390 -17.18498 -16.82462 -16.57139 -15.88001 -15.79479 -15.54516 -15.12250 -15.02094 -14.53814 -14.43854 -14.16826 -13.96953 -13.93531 -13.85533 -13.74442 -13.54361 -13.47308 -13.30390 -13.23502 -13.04199 -12.93274 -12.55737 -12.24524 -12.19927 -12.12817 -12.07554 -11.90877 -11.66889 -11.51437 -11.42037 -11.30328 -10.87895 -10.54920 -10.31198 -10.22714 -9.56375 -8.96674 0.29869 0.44313 1.24432 1.45707 1.57814 1.58062 1.87284 1.88923 1.97509 2.07757 2.33572 2.56844 2.68466 3.65500 3.69765 3.81554 3.90483 3.91193 3.98064 4.00435 4.07748 4.11272 4.22789 4.28346 4.36858 4.43979 4.48358 4.57740 4.60759 4.67091 4.69491 4.71009 4.72920 4.73570 4.75662 4.78093 4.78269 4.82906 5.03865 5.10386 5.13143 5.17676 5.34136 5.35273 5.42376 5.43613 5.49418 5.51903 5.54537 5.61775 6.32488 6.51588 6.73438 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.053 3.947 3 O -0.314 6.314 4 C 0.177 3.823 5 C -0.244 4.244 6 C -0.049 4.049 7 C -0.193 4.193 8 C -0.061 4.061 9 O -0.534 6.534 10 Si 0.946 3.054 11 H -0.253 1.253 12 H -0.253 1.253 13 H -0.250 1.250 14 C 0.200 3.800 15 O -0.295 6.295 16 C 0.063 3.937 17 C -0.081 4.081 18 C -0.109 4.109 19 C -0.397 4.397 20 Si 0.967 3.033 21 C -0.442 4.442 22 C -0.442 4.442 23 C -0.394 4.394 24 C -0.247 4.247 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.080 0.920 28 H 0.065 0.935 29 H 0.065 0.935 30 H 0.132 0.868 31 H 0.131 0.869 32 H 0.115 0.885 33 H 0.371 0.629 34 H 0.064 0.936 35 H 0.064 0.936 36 H 0.084 0.916 37 H 0.073 0.927 38 H 0.060 0.940 39 H 0.076 0.924 40 H 0.077 0.923 41 H 0.070 0.930 42 H 0.069 0.931 43 H 0.071 0.929 44 H 0.070 0.930 45 H 0.069 0.931 46 H 0.070 0.930 47 H 0.081 0.919 48 H 0.081 0.919 49 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.157 -0.754 0.156 2.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.022 4.022 3 O -0.227 6.227 4 C 0.131 3.869 5 C -0.262 4.262 6 C -0.067 4.067 7 C -0.194 4.194 8 C -0.172 4.172 9 O -0.339 6.339 10 Si 0.769 3.231 11 H -0.177 1.177 12 H -0.177 1.177 13 H -0.174 1.174 14 C 0.153 3.847 15 O -0.207 6.207 16 C -0.012 4.012 17 C -0.100 4.100 18 C -0.147 4.147 19 C -0.484 4.484 20 Si 1.165 2.835 21 C -0.550 4.550 22 C -0.550 4.550 23 C -0.479 4.479 24 C -0.267 4.267 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.099 0.901 28 H 0.083 0.917 29 H 0.083 0.917 30 H 0.150 0.850 31 H 0.149 0.851 32 H 0.133 0.867 33 H 0.217 0.783 34 H 0.082 0.918 35 H 0.082 0.918 36 H 0.102 0.898 37 H 0.092 0.908 38 H 0.079 0.921 39 H 0.095 0.905 40 H 0.096 0.904 41 H 0.089 0.911 42 H 0.088 0.912 43 H 0.090 0.910 44 H 0.089 0.911 45 H 0.088 0.912 46 H 0.089 0.911 47 H 0.100 0.900 48 H 0.099 0.901 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -1.510 -0.756 0.726 1.838 hybrid contribution -0.785 -0.501 -0.364 1.000 sum -2.295 -1.257 0.362 2.641 Atomic orbital electron populations 1.21794 0.92413 1.03164 1.03696 1.22862 0.96118 0.81469 1.01709 1.86080 1.18817 1.29917 1.87936 1.18661 0.82370 0.93318 0.92548 1.21063 0.93809 0.98282 1.13088 1.20716 0.94936 0.95688 0.95354 1.19510 0.96281 0.91006 1.12616 1.24710 0.92113 1.11145 0.89251 1.86554 1.82082 1.49151 1.16075 0.85808 0.80375 0.75841 0.81077 1.17746 1.17708 1.17361 1.18358 0.90002 0.84792 0.91550 1.86189 1.35737 1.11564 1.87254 1.23064 0.91879 0.84667 1.01595 1.21657 0.97069 0.91633 0.99593 1.21706 0.99940 0.97114 0.95913 1.26504 1.09061 1.04491 1.08321 0.80512 0.68010 0.67257 0.67752 1.26013 1.07615 1.08254 1.13138 1.26014 1.08690 1.10541 1.09767 1.26817 1.04847 1.10003 1.06260 1.20447 0.94031 0.96429 1.15779 0.91401 0.91394 0.90093 0.91721 0.91719 0.85048 0.85131 0.86712 0.78267 0.91757 0.91795 0.89796 0.90809 0.92146 0.90542 0.90431 0.91063 0.91215 0.91022 0.91067 0.91202 0.91115 0.90011 0.90056 0.84440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.28 37.16 0.38 0.62 16 2 C 0.05 -0.03 5.46 37.16 0.20 0.18 16 3 O -0.31 -0.78 10.13 -19.42 -0.20 -0.98 16 4 C 0.18 0.48 6.68 -39.24 -0.26 0.22 16 5 C -0.24 -0.36 9.04 -39.41 -0.36 -0.72 16 6 C -0.05 -0.07 8.65 -39.63 -0.34 -0.41 16 7 C -0.19 -0.43 5.27 -104.45 -0.55 -0.98 16 8 C -0.06 -0.09 2.37 36.00 0.09 0.00 16 9 O -0.53 -1.09 12.88 -35.23 -0.45 -1.55 16 10 Si 0.95 0.33 25.49 -169.99 -4.33 -4.00 16 11 H -0.25 0.03 6.73 56.52 0.38 0.41 16 12 H -0.25 -0.44 7.11 56.52 0.40 -0.03 16 13 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 14 C 0.20 0.61 6.66 -39.24 -0.26 0.35 16 15 O -0.30 -0.87 9.24 -19.42 -0.18 -1.05 16 16 C 0.06 0.06 4.11 37.16 0.15 0.21 16 17 C -0.08 0.00 2.40 -88.76 -0.21 -0.21 16 18 C -0.11 -0.07 5.21 -25.30 -0.13 -0.20 16 19 C -0.40 0.22 5.85 38.30 0.22 0.45 16 20 Si 0.97 -2.26 13.36 -169.99 -2.27 -4.53 16 21 C -0.44 0.60 8.65 101.05 0.87 1.47 16 22 C -0.44 0.63 8.65 101.05 0.87 1.50 16 23 C -0.39 0.59 5.29 38.72 0.20 0.80 16 24 C -0.25 -0.70 8.97 -39.29 -0.35 -1.05 16 25 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 26 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 28 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 29 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 30 H 0.13 -0.08 6.29 -52.49 -0.33 -0.41 16 31 H 0.13 -0.06 4.88 -52.48 -0.26 -0.31 16 32 H 0.12 0.18 7.83 -51.92 -0.41 -0.23 16 33 H 0.37 -0.47 8.70 45.56 0.40 -0.07 16 34 H 0.06 0.03 7.58 -51.93 -0.39 -0.36 16 35 H 0.06 0.02 7.67 -51.93 -0.40 -0.38 16 36 H 0.08 0.01 8.13 -51.93 -0.42 -0.41 16 37 H 0.07 0.17 8.12 -51.93 -0.42 -0.25 16 38 H 0.06 0.04 8.04 -51.93 -0.42 -0.38 16 39 H 0.08 -0.02 8.04 -51.93 -0.42 -0.44 16 40 H 0.08 -0.05 8.04 -51.93 -0.42 -0.46 16 41 H 0.07 -0.09 7.96 -51.92 -0.41 -0.50 16 42 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 43 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 44 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 45 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 46 H 0.07 -0.09 7.96 -51.92 -0.41 -0.51 16 47 H 0.08 -0.14 8.03 -51.93 -0.42 -0.56 16 48 H 0.08 -0.15 8.06 -51.93 -0.42 -0.57 16 49 H 0.14 0.25 6.30 -52.48 -0.33 -0.08 16 LS Contribution 388.83 15.07 5.86 5.86 Total: 0.00 -5.02 388.83 -9.06 -14.08 By element: Atomic # 1 Polarization: -2.04 SS G_CDS: -8.01 Total: -10.05 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: 0.53 Total: 2.22 kcal Atomic # 8 Polarization: -2.75 SS G_CDS: -0.83 Total: -3.58 kcal Atomic # 14 Polarization: -1.92 SS G_CDS: -6.60 Total: -8.53 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -5.02 -9.06 -14.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_26952_18051908.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.564 kcal (2) G-P(sol) polarization free energy of solvation -5.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.078 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds