Wall clock time and date at job start Fri Mar 5 2021 23:50:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52997 * 109.46975 * 2 1 4 4 O 1.42905 * 109.47123 * 179.97438 * 3 2 1 5 5 C 1.35898 * 117.00188 * 179.97438 * 4 3 2 6 6 C 1.38750 * 120.02648 * 0.02562 * 5 4 3 7 7 C 1.38196 * 120.05647 * 180.02562 * 6 5 4 8 8 C 1.38162 * 120.10846 * 359.97438 * 7 6 5 9 9 C 1.50697 * 119.97364 * 179.97438 * 8 7 6 10 10 O 1.42901 * 109.47131 * 105.02335 * 9 8 7 11 11 Si 1.86294 * 109.47059 * 345.02297 * 9 8 7 12 12 H 1.48496 * 109.47342 * 60.00125 * 11 9 8 13 13 H 1.48505 * 109.46911 * 179.97438 * 11 9 8 14 14 H 1.48494 * 109.47320 * 300.00004 * 11 9 8 15 15 C 1.38796 * 120.05156 * 0.02562 * 8 7 6 16 16 O 1.35900 * 120.02677 * 179.97438 * 15 8 7 17 17 C 1.42901 * 117.00200 * 179.97438 * 16 15 8 18 18 C 1.52995 * 109.47074 * 179.97438 * 17 16 15 19 19 C 1.53566 * 109.47643 * 293.54788 * 18 17 16 20 20 C 1.55147 * 111.29010 * 190.93802 * 19 18 17 21 21 Si 1.89333 * 101.34989 * 28.58791 * 20 19 18 22 22 C 1.86301 * 111.45813 * 114.13512 * 21 20 19 23 23 C 1.86297 * 111.45926 * 239.08100 * 21 20 19 24 24 C 1.56066 * 109.48114 * 173.43596 * 18 17 16 25 25 C 1.38612 * 119.94445 * 0.22767 * 15 8 7 26 26 H 1.09003 * 109.47207 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47253 * 300.00242 * 1 2 3 28 28 H 1.09006 * 109.46892 * 60.00394 * 1 2 3 29 29 H 1.08997 * 109.47253 * 239.99758 * 2 1 3 30 30 H 1.09006 * 109.46892 * 119.99606 * 2 1 3 31 31 H 1.09006 * 109.47490 * 59.99993 * 3 2 1 32 32 H 1.08993 * 109.47170 * 299.99746 * 3 2 1 33 33 H 1.07998 * 119.97305 * 0.02562 * 6 5 4 34 34 H 1.08002 * 119.94895 * 179.97438 * 7 6 5 35 35 H 1.08998 * 109.46789 * 225.02182 * 9 8 7 36 36 H 0.96696 * 113.99864 * 300.00244 * 10 9 8 37 37 H 1.09007 * 109.46885 * 60.00180 * 17 16 15 38 38 H 1.09005 * 109.47062 * 300.00380 * 17 16 15 39 39 H 1.09004 * 109.46872 * 53.55317 * 18 17 16 40 40 H 1.09003 * 109.12206 * 70.45930 * 19 18 17 41 41 H 1.08996 * 109.12221 * 311.42400 * 19 18 17 42 42 H 1.09002 * 111.04815 * 270.56954 * 20 19 18 43 43 H 1.08999 * 111.04827 * 146.61077 * 20 19 18 44 44 H 1.09002 * 109.47148 * 185.06678 * 22 21 20 45 45 H 1.09001 * 109.46900 * 65.06830 * 22 21 20 46 46 H 1.09004 * 109.47198 * 305.06808 * 22 21 20 47 47 H 1.08995 * 109.47233 * 294.93123 * 23 21 20 48 48 H 1.08997 * 109.47080 * 54.93469 * 23 21 20 49 49 H 1.08998 * 109.47258 * 174.93080 * 23 21 20 50 50 H 1.08996 * 111.41269 * 43.11689 * 24 18 17 51 51 H 1.09006 * 111.49251 * 278.12945 * 24 18 17 52 52 H 1.08011 * 120.05207 * 179.74490 * 25 15 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 3.4690 1.4425 0.0006 5 6 4.0860 2.6534 0.0001 6 6 3.3308 3.8174 -0.0003 7 6 3.9576 5.0490 -0.0013 8 6 5.3371 5.1247 -0.0013 9 6 6.0174 6.4693 -0.0030 10 8 6.5440 6.7384 1.2979 11 14 4.7838 7.7888 -0.4587 12 1 3.6773 7.7952 0.5316 13 1 5.4541 9.1140 -0.4598 14 1 4.2366 7.5092 -1.8106 15 6 6.0969 3.9631 -0.0009 16 8 7.4539 4.0381 -0.0014 17 6 8.1719 2.8026 -0.0003 18 6 9.6753 3.0865 -0.0017 19 6 10.0701 3.7482 -1.3301 20 6 11.6118 3.8067 -1.4939 21 14 12.1512 2.2975 -0.4860 22 6 12.9200 0.9927 -1.5710 23 6 13.2946 2.7793 0.9038 24 6 10.4581 1.7471 0.1677 25 6 5.4705 2.7266 -0.0052 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 1.8934 -0.5139 -0.8899 30 1 1.8933 -0.5138 0.8901 31 1 1.6766 1.9564 0.8900 32 1 1.6767 1.9563 -0.8899 33 1 2.2523 3.7609 0.0001 34 1 3.3681 5.9540 -0.0021 35 1 6.8296 6.4646 -0.7299 36 1 5.8757 6.7576 1.9964 37 1 7.9099 2.2293 -0.8896 38 1 7.9105 2.2312 0.8904 39 1 9.9196 3.7550 0.8239 40 1 9.6694 4.7615 -1.3573 41 1 9.6449 3.1757 -2.1544 42 1 12.0160 4.7258 -1.0695 43 1 11.8986 3.7016 -2.5402 44 1 13.1356 0.1056 -0.9753 45 1 13.8458 1.3761 -1.9999 46 1 12.2284 0.7329 -2.3724 47 1 14.2227 3.1739 0.4904 48 1 12.8174 3.5421 1.5189 49 1 13.5125 1.9036 1.5151 50 1 10.0313 0.9560 -0.4489 51 1 10.5138 1.4466 1.2140 52 1 6.0601 1.8216 -0.0090 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_26953_18051908.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:50:11 Heat of formation + Delta-G solvation = -146.153729 kcal Electronic energy + Delta-G solvation = -27627.407704 eV Core-core repulsion = 23908.103090 eV Total energy + Delta-G solvation = -3719.304613 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 338.187 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.62086 -40.16250 -38.58183 -37.09287 -36.44697 -34.92148 -31.93842 -31.24376 -30.38411 -29.23474 -28.50852 -27.83276 -27.23651 -25.98651 -24.32998 -23.51544 -22.53108 -22.03110 -20.69250 -19.78298 -18.24797 -17.59801 -17.35022 -17.24498 -16.90866 -16.54640 -15.96734 -15.93904 -15.53908 -15.11974 -15.10963 -15.04032 -14.73186 -14.36065 -13.98217 -13.95834 -13.88513 -13.85116 -13.61971 -13.52232 -13.39091 -13.31289 -13.23393 -12.97110 -12.75146 -12.58225 -12.42829 -12.22435 -12.13535 -12.07897 -11.97425 -11.83106 -11.64801 -11.50630 -11.42693 -11.31011 -10.88379 -10.55336 -10.33717 -10.22810 -9.56299 -8.96602 0.29880 0.44382 1.24366 1.45603 1.57248 1.58040 1.86387 1.88398 1.97468 2.05257 2.32581 2.55981 2.68490 3.65627 3.67810 3.80027 3.81681 3.85368 3.92543 3.99263 4.06806 4.10551 4.15557 4.23793 4.30022 4.37391 4.42944 4.47084 4.53594 4.57411 4.60369 4.63271 4.68958 4.70241 4.71601 4.73499 4.75379 4.77220 4.81153 4.95267 5.01536 5.09547 5.10971 5.15958 5.17284 5.33438 5.35092 5.37896 5.42234 5.46694 5.51394 5.52896 5.61408 6.32655 6.51671 6.73350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.124 4.124 3 C 0.057 3.943 4 O -0.314 6.314 5 C 0.178 3.822 6 C -0.243 4.243 7 C -0.049 4.049 8 C -0.193 4.193 9 C -0.061 4.061 10 O -0.535 6.535 11 Si 0.946 3.054 12 H -0.253 1.253 13 H -0.253 1.253 14 H -0.250 1.250 15 C 0.200 3.800 16 O -0.295 6.295 17 C 0.063 3.937 18 C -0.082 4.082 19 C -0.109 4.109 20 C -0.398 4.398 21 Si 0.968 3.032 22 C -0.442 4.442 23 C -0.442 4.442 24 C -0.394 4.394 25 C -0.247 4.247 26 H 0.066 0.934 27 H 0.058 0.942 28 H 0.058 0.942 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.065 0.935 32 H 0.065 0.935 33 H 0.132 0.868 34 H 0.131 0.869 35 H 0.115 0.885 36 H 0.371 0.629 37 H 0.064 0.936 38 H 0.064 0.936 39 H 0.085 0.915 40 H 0.070 0.930 41 H 0.060 0.940 42 H 0.076 0.924 43 H 0.077 0.923 44 H 0.069 0.931 45 H 0.069 0.931 46 H 0.070 0.930 47 H 0.070 0.930 48 H 0.071 0.929 49 H 0.069 0.931 50 H 0.081 0.919 51 H 0.081 0.919 52 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.502 -1.847 -0.154 2.386 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.162 4.162 3 C -0.018 4.018 4 O -0.227 6.227 5 C 0.131 3.869 6 C -0.262 4.262 7 C -0.067 4.067 8 C -0.194 4.194 9 C -0.172 4.172 10 O -0.339 6.339 11 Si 0.769 3.231 12 H -0.177 1.177 13 H -0.177 1.177 14 H -0.173 1.173 15 C 0.153 3.847 16 O -0.207 6.207 17 C -0.012 4.012 18 C -0.100 4.100 19 C -0.147 4.147 20 C -0.484 4.484 21 Si 1.165 2.835 22 C -0.550 4.550 23 C -0.551 4.551 24 C -0.479 4.479 25 C -0.267 4.267 26 H 0.085 0.915 27 H 0.077 0.923 28 H 0.077 0.923 29 H 0.093 0.907 30 H 0.093 0.907 31 H 0.083 0.917 32 H 0.083 0.917 33 H 0.149 0.851 34 H 0.149 0.851 35 H 0.133 0.867 36 H 0.217 0.783 37 H 0.082 0.918 38 H 0.083 0.917 39 H 0.104 0.896 40 H 0.088 0.912 41 H 0.079 0.921 42 H 0.095 0.905 43 H 0.096 0.904 44 H 0.088 0.912 45 H 0.089 0.911 46 H 0.089 0.911 47 H 0.089 0.911 48 H 0.090 0.910 49 H 0.088 0.912 50 H 0.100 0.900 51 H 0.100 0.900 52 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -1.289 -1.233 -0.713 1.921 hybrid contribution -0.705 -0.558 0.396 0.983 sum -1.995 -1.791 -0.317 2.699 Atomic orbital electron populations 1.21700 0.93968 1.02836 1.02318 1.21501 0.96259 0.94544 1.03876 1.22967 0.77840 0.99216 1.01758 1.86060 1.21817 1.26874 1.87937 1.18656 0.91456 0.84189 0.92550 1.21060 1.00250 0.91844 1.13084 1.20716 0.92898 0.97719 0.95353 1.19512 0.92678 0.94602 1.12625 1.24712 1.05707 0.97535 0.89270 1.86554 1.37584 1.93616 1.16145 0.85811 0.77612 0.78617 0.81091 1.17739 1.17696 1.17338 1.18358 0.82833 0.91957 0.91547 1.86189 1.14319 1.32983 1.87253 1.23060 0.91740 0.84787 1.01597 1.21683 0.91577 0.97212 0.99545 1.21708 0.95401 1.01495 0.96064 1.26503 0.99650 1.13935 1.08358 0.80502 0.67196 0.68030 0.67728 1.26014 1.07181 1.12064 1.09766 1.26014 1.10329 1.05598 1.13120 1.26835 1.16462 0.98300 1.06312 1.20448 0.92716 0.97731 1.15784 0.91495 0.92263 0.92270 0.90720 0.90719 0.91712 0.91701 0.85064 0.85132 0.86711 0.78257 0.91817 0.91727 0.89616 0.91162 0.92095 0.90479 0.90407 0.91168 0.91136 0.91073 0.91084 0.90975 0.91191 0.90017 0.90008 0.84432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.31 9.91 37.16 0.37 0.68 16 2 C -0.12 0.12 6.30 -26.73 -0.17 -0.04 16 3 C 0.06 -0.01 4.74 37.16 0.18 0.16 16 4 O -0.31 -0.79 10.14 -19.42 -0.20 -0.99 16 5 C 0.18 0.49 6.68 -39.24 -0.26 0.22 16 6 C -0.24 -0.37 9.04 -39.41 -0.36 -0.73 16 7 C -0.05 -0.07 8.65 -39.62 -0.34 -0.41 16 8 C -0.19 -0.44 5.27 -104.45 -0.55 -0.99 16 9 C -0.06 -0.09 2.37 36.00 0.09 -0.01 16 10 O -0.53 -1.14 12.88 -35.23 -0.45 -1.60 16 11 Si 0.95 0.38 25.49 -169.99 -4.33 -3.95 16 12 H -0.25 0.02 6.73 56.52 0.38 0.40 16 13 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 14 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 15 C 0.20 0.62 6.66 -39.24 -0.26 0.36 16 16 O -0.30 -0.88 9.24 -19.42 -0.18 -1.06 16 17 C 0.06 0.06 4.11 37.15 0.15 0.21 16 18 C -0.08 0.00 2.40 -88.69 -0.21 -0.21 16 19 C -0.11 -0.03 5.21 -25.30 -0.13 -0.16 16 20 C -0.40 0.31 5.85 38.29 0.22 0.54 16 21 Si 0.97 -2.30 13.35 -169.99 -2.27 -4.57 16 22 C -0.44 0.66 8.65 101.05 0.87 1.54 16 23 C -0.44 0.57 8.65 101.05 0.87 1.45 16 24 C -0.39 0.59 5.30 38.80 0.21 0.79 16 25 C -0.25 -0.70 8.97 -39.29 -0.35 -1.05 16 26 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 32 H 0.06 -0.07 7.66 -51.93 -0.40 -0.46 16 33 H 0.13 -0.06 6.29 -52.49 -0.33 -0.39 16 34 H 0.13 -0.05 4.88 -52.49 -0.26 -0.31 16 35 H 0.12 0.18 7.82 -51.93 -0.41 -0.22 16 36 H 0.37 -0.45 8.70 45.56 0.40 -0.06 16 37 H 0.06 0.01 7.58 -51.93 -0.39 -0.38 16 38 H 0.06 0.03 7.67 -51.93 -0.40 -0.37 16 39 H 0.09 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.07 0.10 8.12 -51.93 -0.42 -0.32 16 41 H 0.06 0.01 8.04 -51.93 -0.42 -0.41 16 42 H 0.08 -0.04 8.04 -51.93 -0.42 -0.46 16 43 H 0.08 -0.07 8.04 -51.93 -0.42 -0.49 16 44 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 45 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 46 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 47 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 48 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 49 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 50 H 0.08 -0.14 8.03 -51.93 -0.42 -0.56 16 51 H 0.08 -0.14 8.06 -51.93 -0.42 -0.56 16 52 H 0.14 0.25 6.30 -52.48 -0.33 -0.08 16 LS Contribution 410.33 15.07 6.18 6.18 Total: 0.00 -4.93 410.33 -9.79 -14.72 By element: Atomic # 1 Polarization: -2.21 SS G_CDS: -8.86 Total: -11.07 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: 0.32 Total: 2.34 kcal Atomic # 8 Polarization: -2.82 SS G_CDS: -0.83 Total: -3.65 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: -6.60 Total: -8.53 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -4.93 -9.79 -14.72 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_26953_18051908.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.438 kcal (2) G-P(sol) polarization free energy of solvation -4.931 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.369 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.785 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.716 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds