Wall clock time and date at job start Sat Mar 6 2021 00:45:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35898 * 117.00188 * 2 1 4 4 C 1.38750 * 120.02648 * 0.02562 * 3 2 1 5 5 C 1.38196 * 120.05647 * 180.02562 * 4 3 2 6 6 C 1.38162 * 120.10846 * 359.97438 * 5 4 3 7 7 C 1.50697 * 119.97364 * 179.97438 * 6 5 4 8 8 O 1.42901 * 109.47131 * 105.02335 * 7 6 5 9 9 Si 1.86294 * 109.47059 * 345.02297 * 7 6 5 10 10 H 1.48505 * 109.46911 * 179.97438 * 9 7 6 11 11 H 1.48494 * 109.47320 * 300.00004 * 9 7 6 12 12 H 1.48496 * 109.47342 * 60.00125 * 9 7 6 13 13 C 1.38796 * 120.05156 * 0.02562 * 6 5 4 14 14 O 1.35900 * 120.02677 * 179.97438 * 13 6 5 15 15 C 1.42901 * 117.00200 * 179.97438 * 14 13 6 16 16 C 1.52995 * 109.47074 * 179.97438 * 15 14 13 17 17 C 1.53566 * 109.47643 * 293.54788 * 16 15 14 18 18 C 1.55147 * 111.29010 * 190.93802 * 17 16 15 19 19 Si 1.89333 * 101.34989 * 28.58791 * 18 17 16 20 20 C 1.86301 * 111.45813 * 114.13512 * 19 18 17 21 21 C 1.86297 * 111.45926 * 239.08100 * 19 18 17 22 22 C 1.56066 * 109.48114 * 173.43596 * 16 15 14 23 23 C 1.38612 * 119.94445 * 0.22767 * 13 6 5 24 24 H 1.09006 * 109.46514 * 299.99654 * 1 2 3 25 25 H 1.08993 * 109.47320 * 59.99395 * 1 2 3 26 26 H 1.08993 * 109.46925 * 179.97438 * 1 2 3 27 27 H 1.07998 * 119.97305 * 0.02562 * 4 3 2 28 28 H 1.08002 * 119.94895 * 179.97438 * 5 4 3 29 29 H 1.08998 * 109.46789 * 225.02182 * 7 6 5 30 30 H 0.96698 * 113.99759 * 179.97438 * 8 7 6 31 31 H 1.09007 * 109.46885 * 60.00180 * 15 14 13 32 32 H 1.09005 * 109.47062 * 300.00380 * 15 14 13 33 33 H 1.09004 * 109.46872 * 53.55317 * 16 15 14 34 34 H 1.09003 * 109.12206 * 70.45930 * 17 16 15 35 35 H 1.08996 * 109.12221 * 311.42400 * 17 16 15 36 36 H 1.09002 * 111.04815 * 270.56954 * 18 17 16 37 37 H 1.08999 * 111.04827 * 146.61077 * 18 17 16 38 38 H 1.09002 * 109.47148 * 185.06678 * 20 19 18 39 39 H 1.09001 * 109.46900 * 65.06830 * 20 19 18 40 40 H 1.09004 * 109.47198 * 305.06808 * 20 19 18 41 41 H 1.08995 * 109.47233 * 294.93123 * 21 19 18 42 42 H 1.08997 * 109.47080 * 54.93469 * 21 19 18 43 43 H 1.08998 * 109.47258 * 174.93080 * 21 19 18 44 44 H 1.08996 * 111.41269 * 43.11689 * 22 16 15 45 45 H 1.09006 * 111.49251 * 278.12945 * 22 16 15 46 46 H 1.08011 * 120.05207 * 179.74490 * 23 13 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 1.2909 2.3749 0.0005 5 6 1.9177 3.6065 0.0000 6 6 3.2973 3.6821 -0.0005 7 6 3.9776 5.0268 -0.0017 8 8 4.5047 5.2950 1.2992 9 14 2.7438 6.3465 -0.4561 10 1 3.4141 7.6717 -0.4566 11 1 2.1960 6.0678 -1.8079 12 1 1.6377 6.3523 0.5347 13 6 4.0570 2.5206 -0.0011 14 8 5.4140 2.5955 -0.0021 15 6 6.1320 1.3600 -0.0021 16 6 7.6354 1.6439 -0.0040 17 6 8.0297 2.3063 -1.3321 18 6 9.5713 2.3649 -1.4965 19 14 10.1111 0.8551 -0.4897 20 6 10.8794 -0.4491 -1.5758 21 6 11.2550 1.3360 0.8998 22 6 8.4182 0.3043 0.1643 23 6 3.4306 1.2841 -0.0058 24 1 -0.3632 0.5138 0.8901 25 1 -0.3633 0.5139 -0.8899 26 1 -0.3633 -1.0276 -0.0005 27 1 0.2124 2.3184 0.0014 28 1 1.3283 4.5115 0.0000 29 1 4.7895 5.0225 -0.7289 30 1 4.9579 6.1461 1.3720 31 1 5.8696 0.7872 -0.8917 32 1 5.8709 0.7881 0.8884 33 1 7.8800 2.3118 0.8220 34 1 7.6290 3.3196 -1.3585 35 1 7.6041 1.7343 -2.1566 36 1 9.9756 3.2837 -1.0717 37 1 9.8576 2.2604 -2.5430 38 1 11.0952 -1.3365 -0.9808 39 1 11.8050 -0.0655 -2.0050 40 1 10.1874 -0.7085 -2.3772 41 1 12.1830 1.7309 0.4863 42 1 10.7781 2.0985 1.5156 43 1 11.4732 0.4599 1.5105 44 1 7.9911 -0.4864 -0.4526 45 1 8.4743 0.0032 1.2104 46 1 4.0202 0.3791 -0.0104 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_575374_18051908.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:45:19 Heat of formation + Delta-G solvation = -132.071872 kcal Electronic energy + Delta-G solvation = -24056.196666 eV Core-core repulsion = 20648.577926 eV Total energy + Delta-G solvation = -3407.618740 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.156 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.54781 -40.02668 -38.42075 -37.07356 -36.39495 -32.26446 -31.24477 -30.40412 -29.24716 -28.52134 -28.47202 -27.24569 -25.95011 -24.30006 -23.06200 -22.16333 -20.69543 -19.67798 -18.34216 -17.86135 -17.30132 -16.91614 -16.74204 -16.57505 -15.99560 -15.69953 -15.68505 -15.11216 -14.90356 -14.47336 -14.25470 -13.98810 -13.93136 -13.72618 -13.67699 -13.60308 -13.49526 -13.31397 -13.24236 -13.14642 -12.73297 -12.42243 -12.35123 -12.18682 -12.14002 -11.96618 -11.65956 -11.56502 -11.46888 -11.31593 -10.89735 -10.56286 -10.35752 -10.13874 -9.52645 -8.92992 0.34198 0.48336 1.23109 1.48568 1.54323 1.56088 1.84998 1.87086 1.95327 2.16511 2.38782 2.55065 2.69542 3.61113 3.75788 3.81700 3.98514 4.04186 4.06744 4.10872 4.16519 4.21993 4.32780 4.42711 4.45132 4.47651 4.55605 4.56074 4.60824 4.67877 4.69626 4.70894 4.72105 4.72642 4.75925 4.77412 5.08109 5.13951 5.14633 5.33393 5.37385 5.39912 5.42484 5.45614 5.50121 5.51297 5.63002 6.32633 6.52392 6.77072 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.173 3.827 4 C -0.242 4.242 5 C -0.045 4.045 6 C -0.147 4.147 7 C -0.063 4.063 8 O -0.542 6.542 9 Si 0.942 3.058 10 H -0.256 1.256 11 H -0.249 1.249 12 H -0.249 1.249 13 C 0.199 3.801 14 O -0.297 6.297 15 C 0.063 3.937 16 C -0.082 4.082 17 C -0.109 4.109 18 C -0.398 4.398 19 Si 0.968 3.032 20 C -0.442 4.442 21 C -0.442 4.442 22 C -0.394 4.394 23 C -0.247 4.247 24 H 0.058 0.942 25 H 0.058 0.942 26 H 0.102 0.898 27 H 0.133 0.867 28 H 0.131 0.869 29 H 0.074 0.926 30 H 0.375 0.625 31 H 0.064 0.936 32 H 0.065 0.935 33 H 0.085 0.915 34 H 0.069 0.931 35 H 0.061 0.939 36 H 0.076 0.924 37 H 0.077 0.923 38 H 0.069 0.931 39 H 0.069 0.931 40 H 0.070 0.930 41 H 0.070 0.930 42 H 0.071 0.929 43 H 0.069 0.931 44 H 0.081 0.919 45 H 0.081 0.919 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.337 -0.435 -1.123 1.251 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.127 3.873 4 C -0.261 4.261 5 C -0.063 4.063 6 C -0.148 4.148 7 C -0.173 4.173 8 O -0.347 6.347 9 Si 0.765 3.235 10 H -0.180 1.180 11 H -0.172 1.172 12 H -0.173 1.173 13 C 0.152 3.848 14 O -0.210 6.210 15 C -0.012 4.012 16 C -0.100 4.100 17 C -0.146 4.146 18 C -0.484 4.484 19 Si 1.166 2.834 20 C -0.550 4.550 21 C -0.550 4.550 22 C -0.479 4.479 23 C -0.266 4.266 24 H 0.077 0.923 25 H 0.077 0.923 26 H 0.120 0.880 27 H 0.151 0.849 28 H 0.149 0.851 29 H 0.092 0.908 30 H 0.222 0.778 31 H 0.082 0.918 32 H 0.083 0.917 33 H 0.103 0.897 34 H 0.087 0.913 35 H 0.080 0.920 36 H 0.095 0.905 37 H 0.096 0.904 38 H 0.088 0.912 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.089 0.911 42 H 0.090 0.910 43 H 0.088 0.912 44 H 0.100 0.900 45 H 0.100 0.900 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -0.278 -0.436 -1.224 1.329 hybrid contribution 0.013 0.057 0.044 0.073 sum -0.265 -0.380 -1.180 1.268 Atomic orbital electron populations 1.23130 0.77775 1.04304 1.01709 1.86077 1.21884 1.26757 1.88084 1.18699 0.91534 0.84266 0.92784 1.21047 1.00317 0.91726 1.13021 1.20675 0.92785 0.97772 0.95031 1.18465 0.92221 0.92320 1.11826 1.24455 1.03833 1.00095 0.88940 1.86545 1.76924 1.42172 1.29061 0.85880 0.79308 0.77531 0.80830 1.18006 1.17249 1.17284 1.18342 0.82766 0.92004 0.91710 1.86156 1.14404 1.33019 1.87379 1.23058 0.91667 0.84829 1.01661 1.21683 0.91641 0.97237 0.99457 1.21708 0.95376 1.01416 0.96137 1.26502 0.99649 1.13926 1.08368 0.80499 0.67197 0.68026 0.67708 1.26014 1.07172 1.12066 1.09781 1.26013 1.10322 1.05600 1.13114 1.26838 1.16433 0.98304 1.06356 1.20416 0.92741 0.97641 1.15802 0.92301 0.92312 0.87952 0.84885 0.85109 0.90845 0.77794 0.91786 0.91682 0.89677 0.91272 0.92047 0.90522 0.90394 0.91154 0.91142 0.91062 0.91092 0.90999 0.91170 0.89987 0.89986 0.84369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.85 10.50 -19.42 -0.20 -1.06 16 3 C 0.17 0.56 6.68 -39.24 -0.26 0.30 16 4 C -0.24 -0.53 9.04 -39.41 -0.36 -0.89 16 5 C -0.04 -0.11 8.65 -39.62 -0.34 -0.46 16 6 C -0.15 -0.51 5.31 -104.45 -0.55 -1.06 16 7 C -0.06 -0.11 2.37 36.00 0.09 -0.02 16 8 O -0.54 -1.17 12.86 -35.23 -0.45 -1.63 16 9 Si 0.94 0.46 25.49 -169.99 -4.33 -3.87 16 10 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 11 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 12 H -0.25 -0.31 6.73 56.52 0.38 0.07 16 13 C 0.20 0.76 6.66 -39.24 -0.26 0.50 16 14 O -0.30 -0.96 9.24 -19.42 -0.18 -1.14 16 15 C 0.06 0.06 4.11 37.15 0.15 0.21 16 16 C -0.08 0.01 2.40 -88.69 -0.21 -0.20 16 17 C -0.11 0.01 5.21 -25.30 -0.13 -0.12 16 18 C -0.40 0.46 5.85 38.29 0.22 0.68 16 19 Si 0.97 -2.51 13.35 -169.99 -2.27 -4.78 16 20 C -0.44 0.73 8.65 101.05 0.87 1.61 16 21 C -0.44 0.68 8.65 101.05 0.87 1.55 16 22 C -0.39 0.63 5.30 38.80 0.21 0.83 16 23 C -0.25 -0.84 8.97 -39.29 -0.35 -1.19 16 24 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 25 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 26 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 27 H 0.13 -0.02 6.29 -52.49 -0.33 -0.35 16 28 H 0.13 0.11 4.88 -52.49 -0.26 -0.14 16 29 H 0.07 0.06 7.82 -51.93 -0.41 -0.34 16 30 H 0.38 -0.87 8.74 45.56 0.40 -0.47 16 31 H 0.06 0.02 7.58 -51.93 -0.39 -0.38 16 32 H 0.06 0.05 7.67 -51.93 -0.40 -0.35 16 33 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.07 0.07 8.12 -51.93 -0.42 -0.36 16 35 H 0.06 -0.01 8.04 -51.93 -0.42 -0.43 16 36 H 0.08 -0.08 8.04 -51.93 -0.42 -0.49 16 37 H 0.08 -0.09 8.04 -51.93 -0.42 -0.51 16 38 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 39 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 40 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 41 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 42 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 43 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 44 H 0.08 -0.15 8.03 -51.93 -0.42 -0.57 16 45 H 0.08 -0.15 8.06 -51.93 -0.42 -0.56 16 46 H 0.14 0.30 6.30 -52.48 -0.33 -0.03 16 LS Contribution 367.02 15.07 5.53 5.53 Total: 0.00 -5.80 367.02 -8.14 -13.94 By element: Atomic # 1 Polarization: -2.54 SS G_CDS: -7.16 Total: -9.70 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: 0.93 Total: 2.71 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.84 Total: -3.82 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: -6.60 Total: -8.66 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -5.80 -8.14 -13.94 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_575374_18051908.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.133 kcal (2) G-P(sol) polarization free energy of solvation -5.799 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.933 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.072 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds