Wall clock time and date at job start Sat Mar 6 2021 00:55:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86297 * 111.24221 * 2 1 4 4 C 1.89333 * 111.45813 * 125.06702 * 2 1 3 5 5 C 1.55147 * 101.34989 * 114.13512 * 4 2 1 6 6 C 1.53566 * 111.29010 * 28.58791 * 5 4 2 7 7 C 1.52995 * 109.47643 * 190.93802 * 6 5 4 8 8 O 1.42901 * 109.47074 * 293.54788 * 7 6 5 9 9 C 1.35961 * 117.00240 * 179.97438 * 8 7 6 10 10 C 1.38616 * 120.06134 * 359.72387 * 9 8 7 11 11 C 1.38219 * 119.97216 * 179.74975 * 10 9 8 12 12 C 1.38228 * 120.09270 * 0.52357 * 11 10 9 13 13 C 1.50695 * 119.93687 * 179.72742 * 12 11 10 14 14 O 1.42895 * 109.47377 * 120.02459 * 13 12 11 15 15 Si 1.86302 * 109.47315 * 0.02562 * 13 12 11 16 16 H 1.48500 * 109.46949 * 60.00028 * 15 13 12 17 17 H 1.48497 * 109.47059 * 180.02562 * 15 13 12 18 18 H 1.48496 * 109.46878 * 300.00023 * 15 13 12 19 19 C 1.38306 * 120.12234 * 359.74917 * 12 11 10 20 20 C 1.38284 * 120.03000 * 359.97438 * 19 12 11 21 21 F 1.35101 * 120.04684 * 179.97438 * 20 19 12 22 22 C 1.56066 * 109.55501 * 311.00476 * 6 5 4 23 23 H 1.09002 * 109.47148 * 59.99975 * 1 2 3 24 24 H 1.09001 * 109.46900 * 300.00128 * 1 2 3 25 25 H 1.09004 * 109.47198 * 180.02562 * 1 2 3 26 26 H 1.08995 * 109.47233 * 59.99762 * 3 2 1 27 27 H 1.08997 * 109.47080 * 180.02562 * 3 2 1 28 28 H 1.08998 * 109.47258 * 299.99719 * 3 2 1 29 29 H 1.09002 * 111.04844 * 232.15327 * 4 2 1 30 30 H 1.08999 * 111.05229 * 356.11516 * 4 2 1 31 31 H 1.09003 * 109.12221 * 149.06655 * 5 4 2 32 32 H 1.08996 * 109.12795 * 268.10531 * 5 4 2 33 33 H 1.09004 * 109.47418 * 70.93608 * 6 5 4 34 34 H 1.09007 * 109.46916 * 53.54343 * 7 6 5 35 35 H 1.09005 * 109.47687 * 173.54545 * 7 6 5 36 36 H 1.08004 * 120.01701 * 0.02562 * 10 9 8 37 37 H 1.07998 * 119.95869 * 180.25220 * 11 10 9 38 38 H 1.09008 * 109.46840 * 240.02349 * 13 12 11 39 39 H 0.96700 * 114.00228 * 300.00225 * 14 13 12 40 40 H 1.07999 * 119.98320 * 179.97438 * 19 12 11 41 41 H 1.08996 * 111.41269 * 283.05303 * 22 6 5 42 42 H 1.09006 * 111.49251 * 158.06559 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5380 1.7364 0.0000 4 6 2.5556 -1.0124 1.4422 5 6 3.2462 -2.1811 0.6911 6 6 3.7193 -1.7454 -0.7034 7 6 4.1417 -2.9771 -1.5067 8 8 5.3027 -3.5593 -0.9107 9 6 5.8107 -4.6711 -1.5062 10 6 5.2012 -5.1935 -2.6363 11 6 5.7222 -6.3207 -3.2431 12 6 6.8441 -6.9345 -2.7185 13 6 7.4055 -8.1669 -3.3794 14 8 8.7497 -7.9149 -3.7936 15 14 6.3691 -8.6016 -4.8653 16 1 6.3867 -7.4717 -5.8287 17 1 6.9221 -9.8164 -5.5161 18 1 4.9723 -8.8635 -4.4348 19 6 7.4520 -6.4199 -1.5878 20 6 6.9384 -5.2890 -0.9798 21 9 7.5317 -4.7863 0.1250 22 6 2.5568 -1.0142 -1.4447 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 0.5139 0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 2.1907 2.2612 0.8899 27 1 3.6274 1.7027 -0.0005 28 1 2.1908 2.2612 -0.8900 29 1 3.2797 -0.4330 2.0151 30 1 1.7543 -1.3786 2.0840 31 1 4.1055 -2.5196 1.2701 32 1 2.5407 -3.0054 0.5873 33 1 4.5675 -1.0680 -0.6042 34 1 3.3305 -3.7052 -1.5088 35 1 4.3683 -2.6826 -2.5315 36 1 4.3222 -4.7173 -3.0450 37 1 5.2495 -6.7251 -4.1260 38 1 7.3927 -8.9963 -2.6722 39 1 8.8370 -7.1877 -4.4250 40 1 8.3282 -6.9014 -1.1795 41 1 1.8198 -1.7216 -1.8246 42 1 2.9328 -0.3696 -2.2393 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_7834706_18051908.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:55:54 Heat of formation + Delta-G solvation = -143.556101 kcal Electronic energy + Delta-G solvation = -21891.765063 eV Core-core repulsion = 18488.414164 eV Total energy + Delta-G solvation = -3403.350898 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 298.131 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -49.67420 -41.24963 -39.47398 -37.48265 -36.56693 -31.92811 -31.85379 -30.64656 -29.29756 -28.56849 -27.71982 -26.18119 -24.60288 -23.51248 -22.53205 -20.85624 -19.47350 -18.55482 -17.97193 -17.41412 -17.23014 -16.46554 -16.25624 -16.02889 -15.79410 -15.63246 -15.45197 -15.08106 -14.51373 -14.34436 -14.03670 -14.01045 -13.90693 -13.66213 -13.58870 -13.39950 -13.33420 -13.16703 -12.83118 -12.59932 -12.36085 -12.29395 -12.19683 -12.11800 -11.74491 -11.61492 -11.44775 -10.94779 -10.64513 -10.52393 -10.40833 -10.00233 -9.21251 0.03303 0.08911 1.07772 1.37114 1.44290 1.48995 1.79256 1.81445 1.84992 2.04007 2.40850 2.47693 3.16617 3.39562 3.51446 3.63739 3.71519 3.88567 3.92437 3.97463 4.09142 4.26024 4.38774 4.46573 4.49661 4.51354 4.59044 4.63025 4.63709 4.66643 4.68251 4.68685 4.80832 4.91083 4.99425 5.01309 5.07182 5.23622 5.29425 5.34556 5.38468 5.44831 5.46227 5.58600 6.25454 6.49197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.442 4.442 2 Si 0.969 3.031 3 C -0.443 4.443 4 C -0.399 4.399 5 C -0.110 4.110 6 C -0.083 4.083 7 C 0.064 3.936 8 O -0.305 6.305 9 C 0.107 3.893 10 C -0.179 4.179 11 C -0.094 4.094 12 C -0.132 4.132 13 C -0.077 4.077 14 O -0.538 6.538 15 Si 0.950 3.050 16 H -0.250 1.250 17 H -0.252 1.252 18 H -0.250 1.250 19 C -0.086 4.086 20 C 0.069 3.931 21 F -0.129 7.129 22 C -0.394 4.394 23 H 0.069 0.931 24 H 0.070 0.930 25 H 0.070 0.930 26 H 0.071 0.929 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.076 0.924 30 H 0.078 0.922 31 H 0.069 0.931 32 H 0.061 0.939 33 H 0.085 0.915 34 H 0.066 0.934 35 H 0.066 0.934 36 H 0.141 0.859 37 H 0.129 0.871 38 H 0.121 0.879 39 H 0.377 0.623 40 H 0.148 0.852 41 H 0.082 0.918 42 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.390 1.089 -2.503 4.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.550 4.550 2 Si 1.167 2.833 3 C -0.551 4.551 4 C -0.485 4.485 5 C -0.148 4.148 6 C -0.101 4.101 7 C -0.011 4.011 8 O -0.218 6.218 9 C 0.060 3.940 10 C -0.198 4.198 11 C -0.112 4.112 12 C -0.133 4.133 13 C -0.187 4.187 14 O -0.343 6.343 15 Si 0.773 3.227 16 H -0.174 1.174 17 H -0.176 1.176 18 H -0.174 1.174 19 C -0.105 4.105 20 C 0.050 3.950 21 F -0.108 7.108 22 C -0.479 4.479 23 H 0.089 0.911 24 H 0.089 0.911 25 H 0.089 0.911 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.088 0.912 29 H 0.095 0.905 30 H 0.097 0.903 31 H 0.088 0.912 32 H 0.080 0.920 33 H 0.103 0.897 34 H 0.084 0.916 35 H 0.084 0.916 36 H 0.159 0.841 37 H 0.147 0.853 38 H 0.138 0.862 39 H 0.225 0.775 40 H 0.166 0.834 41 H 0.101 0.899 42 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -3.714 0.544 -2.604 4.568 hybrid contribution 0.151 0.551 0.084 0.578 sum -3.563 1.095 -2.520 4.499 Atomic orbital electron populations 1.26012 1.19893 1.04592 1.04533 0.80483 0.67428 0.67559 0.67821 1.26017 1.06693 1.17833 1.04550 1.26515 1.05532 1.06300 1.10166 1.21715 1.00722 0.98182 0.94141 1.21705 0.98752 0.94974 0.94708 1.23103 0.85583 0.95174 0.97207 1.86174 1.44408 1.38466 1.52748 1.19046 0.93313 0.88441 0.93197 1.21089 1.02668 0.99211 0.96787 1.20896 0.95604 0.95165 0.99509 1.20062 0.97074 0.99069 0.97114 1.24953 0.89751 0.97201 1.06841 1.86526 1.24636 1.57251 1.65862 0.85676 0.78641 0.81325 0.77068 1.17410 1.17590 1.17365 1.20871 1.00485 0.93971 0.95172 1.17018 0.93854 0.96273 0.87894 1.91531 1.82653 1.86738 1.49870 1.26837 1.02601 1.07836 1.10625 0.91133 0.91086 0.91058 0.91025 0.91018 0.91150 0.90473 0.90319 0.91216 0.92008 0.89680 0.91594 0.91568 0.84117 0.85325 0.86162 0.77545 0.83407 0.89930 0.89929 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.92 8.65 101.05 0.87 1.79 16 2 Si 0.97 -2.91 13.35 -169.99 -2.27 -5.18 16 3 C -0.44 0.82 8.65 101.05 0.87 1.69 16 4 C -0.40 0.48 5.85 38.29 0.22 0.70 16 5 C -0.11 0.02 5.21 -25.30 -0.13 -0.12 16 6 C -0.08 0.06 2.40 -88.69 -0.21 -0.15 16 7 C 0.06 -0.02 4.11 37.15 0.15 0.13 16 8 O -0.30 -0.81 9.78 -19.62 -0.19 -1.00 16 9 C 0.11 0.25 6.69 -39.18 -0.26 -0.01 16 10 C -0.18 -0.05 9.04 -39.45 -0.36 -0.41 16 11 C -0.09 0.02 8.66 -39.59 -0.34 -0.32 16 12 C -0.13 -0.02 5.39 -104.60 -0.56 -0.58 16 13 C -0.08 0.08 2.82 36.00 0.10 0.18 16 14 O -0.54 0.09 12.77 -35.23 -0.45 -0.36 16 15 Si 0.95 -1.27 25.07 -169.99 -4.26 -5.53 16 16 H -0.25 0.32 7.11 56.52 0.40 0.72 16 17 H -0.25 -0.07 7.11 56.52 0.40 0.34 16 18 H -0.25 0.23 7.11 56.52 0.40 0.63 16 19 C -0.09 -0.12 9.58 -39.54 -0.38 -0.50 16 20 C 0.07 0.22 7.31 -39.30 -0.29 -0.07 16 21 F -0.13 -0.63 17.11 2.25 0.04 -0.59 16 22 C -0.39 0.96 5.30 38.80 0.21 1.16 16 23 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 24 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 25 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 26 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 27 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 28 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 29 H 0.08 -0.07 8.04 -51.93 -0.42 -0.48 16 30 H 0.08 -0.10 8.04 -51.93 -0.42 -0.52 16 31 H 0.07 0.10 8.12 -51.93 -0.42 -0.32 16 32 H 0.06 -0.02 8.04 -51.93 -0.42 -0.44 16 33 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.07 -0.09 7.58 -51.93 -0.39 -0.48 16 35 H 0.07 -0.09 7.68 -51.93 -0.40 -0.49 16 36 H 0.14 -0.26 6.30 -52.48 -0.33 -0.59 16 37 H 0.13 -0.24 4.87 -52.49 -0.26 -0.50 16 38 H 0.12 -0.22 7.96 -51.92 -0.41 -0.63 16 39 H 0.38 -1.26 8.70 45.56 0.40 -0.87 16 40 H 0.15 0.07 8.06 -52.49 -0.42 -0.35 16 41 H 0.08 -0.24 8.03 -51.93 -0.42 -0.65 16 42 H 0.08 -0.23 8.06 -51.93 -0.42 -0.65 16 LS Contribution 344.46 15.07 5.19 5.19 Total: 0.00 -4.90 344.46 -8.07 -12.97 By element: Atomic # 1 Polarization: -2.97 SS G_CDS: -6.03 Total: -9.00 kcal Atomic # 6 Polarization: 3.61 SS G_CDS: -0.10 Total: 3.51 kcal Atomic # 8 Polarization: -0.72 SS G_CDS: -0.64 Total: -1.36 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.04 Total: -0.59 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: -6.53 Total: -10.72 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -4.90 -8.07 -12.97 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_7834706_18051908.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.582 kcal (2) G-P(sol) polarization free energy of solvation -4.900 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.074 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.974 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds