Wall clock time and date at job start Sat Mar 6 2021 01:04:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86297 * 111.24221 * 2 1 4 4 C 1.89654 * 111.45802 * 125.06597 * 2 1 3 5 5 C 1.55920 * 99.33841 * 138.35691 * 4 2 1 6 6 C 1.53571 * 109.50277 * 319.37972 * 5 4 2 7 7 C 1.53005 * 109.12306 * 169.41478 * 6 5 4 8 8 O 1.42894 * 109.46845 * 66.45284 * 7 6 5 9 9 C 1.35834 * 116.99827 * 179.97438 * 8 7 6 10 10 C 1.36612 * 120.22230 * 269.72087 * 9 8 7 11 11 C 1.50702 * 119.52202 * 0.02562 * 10 9 8 12 12 O 1.42896 * 109.47066 * 284.99251 * 11 10 9 13 13 Si 1.86306 * 109.47039 * 164.99720 * 11 10 9 14 14 H 1.48500 * 109.47145 * 59.99494 * 13 11 10 15 15 H 1.48498 * 109.46939 * 179.97438 * 13 11 10 16 16 H 1.48504 * 109.46940 * 299.99866 * 13 11 10 17 17 C 1.39247 * 120.94727 * 179.76270 * 10 9 8 18 18 C 1.36234 * 121.04212 * 0.52455 * 17 10 9 19 19 Cl 1.73600 * 120.12502 * 179.72386 * 18 17 10 20 20 C 1.40654 * 119.74648 * 359.73819 * 18 17 10 21 21 C 1.40481 * 121.27255 * 179.97438 * 20 18 17 22 22 C 1.36147 * 119.65126 * 180.02562 * 21 20 18 23 23 C 1.39308 * 120.97188 * 359.97438 * 22 21 20 24 24 C 1.36174 * 120.97697 * 359.97438 * 23 22 21 25 25 C 1.40380 * 119.65470 * 359.97438 * 24 23 22 26 26 C 1.55354 * 111.29225 * 49.07554 * 6 5 4 27 27 H 1.09002 * 109.47148 * 59.99975 * 1 2 3 28 28 H 1.09001 * 109.46900 * 300.00128 * 1 2 3 29 29 H 1.09004 * 109.47198 * 180.02562 * 1 2 3 30 30 H 1.08995 * 109.47233 * 59.99762 * 3 2 1 31 31 H 1.08997 * 109.47080 * 180.02562 * 3 2 1 32 32 H 1.08998 * 109.47258 * 299.99719 * 3 2 1 33 33 H 1.08998 * 111.42418 * 255.88370 * 4 2 1 34 34 H 1.09003 * 111.42412 * 20.82559 * 4 2 1 35 35 H 1.08995 * 109.47225 * 79.40017 * 5 4 2 36 36 H 1.09000 * 109.47371 * 199.35610 * 5 4 2 37 37 H 1.09001 * 109.12873 * 288.55222 * 6 5 4 38 38 H 1.09000 * 109.46644 * 186.45324 * 7 6 5 39 39 H 1.09000 * 109.46972 * 306.45125 * 7 6 5 40 40 H 1.08996 * 109.47711 * 44.99485 * 11 10 9 41 41 H 0.96705 * 114.00507 * 300.00377 * 12 11 10 42 42 H 1.07999 * 119.47885 * 180.26202 * 17 10 9 43 43 H 1.07995 * 120.17435 * 0.02562 * 21 20 18 44 44 H 1.08003 * 119.51275 * 180.02562 * 22 21 20 45 45 H 1.08010 * 119.51356 * 180.02562 * 23 22 21 46 46 H 1.07999 * 120.17159 * 180.02562 * 24 23 22 47 47 H 1.08995 * 111.07416 * 213.38000 * 26 6 5 48 48 H 1.08996 * 111.09205 * 89.35608 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5380 1.7364 0.0000 4 6 2.5568 -1.0141 1.4447 5 6 3.7194 -1.7445 0.7058 6 6 3.2462 -2.1820 -0.6881 7 6 4.4527 -2.6558 -1.5012 8 8 4.9813 -3.8484 -0.9180 9 6 6.0631 -4.4038 -1.5234 10 6 5.8969 -5.3381 -2.5060 11 6 4.5050 -5.7476 -2.9137 12 8 3.9471 -6.6010 -1.9125 13 14 4.5762 -6.6589 -4.5371 14 1 5.4247 -7.8686 -4.3889 15 1 3.2047 -7.0629 -4.9384 16 1 5.1560 -5.7720 -5.5775 17 6 6.9950 -5.9136 -3.1401 18 6 8.2666 -5.5701 -2.7923 19 17 9.6184 -6.3078 -3.5937 20 6 8.4800 -4.6157 -1.7814 21 6 9.7774 -4.2381 -1.3971 22 6 9.9458 -3.3113 -0.4142 23 6 8.8493 -2.7294 0.2180 24 6 7.5776 -3.0705 -0.1295 25 6 7.3650 -4.0219 -1.1396 26 6 2.5556 -1.0124 -1.4423 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 2.1907 2.2612 0.8899 31 1 3.6274 1.7027 -0.0005 32 1 2.1908 2.2612 -0.8900 33 1 2.9328 -0.3695 2.2392 34 1 1.8198 -1.7216 1.8247 35 1 4.5681 -1.0679 0.6057 36 1 4.0203 -2.6213 1.2792 37 1 2.5407 -3.0062 -0.5835 38 1 4.1428 -2.8590 -2.5262 39 1 5.2187 -1.8803 -1.5001 40 1 3.8822 -4.8597 -3.0224 41 1 4.4508 -7.4127 -1.7622 42 1 6.8361 -6.6469 -3.9168 43 1 10.6367 -4.6807 -1.8789 44 1 10.9443 -3.0224 -0.1208 45 1 9.0101 -1.9962 0.9946 46 1 6.7369 -2.6108 0.3689 47 1 1.7543 -1.3787 -2.0838 48 1 3.2797 -0.4331 -2.0150 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_8272892_18051908.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:04:58 Heat of formation + Delta-G solvation = -83.448902 kcal Electronic energy + Delta-G solvation = -28784.824205 eV Core-core repulsion = 24953.517893 eV Total energy + Delta-G solvation = -3831.306312 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 364.117 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.02532 -39.67249 -38.52909 -37.75543 -36.86453 -36.26016 -32.94555 -32.06504 -30.76363 -30.01651 -29.25696 -28.53530 -27.47028 -26.42458 -24.62010 -23.99348 -23.17015 -22.74792 -20.81454 -19.25997 -18.75332 -18.65419 -17.51782 -17.00494 -16.59464 -16.33303 -15.94896 -15.86181 -15.69601 -15.34617 -14.97335 -14.91709 -14.72050 -14.46027 -14.20077 -14.10724 -13.98004 -13.91801 -13.79321 -13.50679 -13.40306 -13.29893 -13.21012 -12.79128 -12.60453 -12.45584 -12.37088 -12.25391 -12.15538 -12.01019 -11.84823 -11.78684 -11.61367 -11.43994 -10.99893 -10.91386 -10.72064 -10.56048 -10.37236 -10.30849 -9.80320 -8.82840 -0.75002 -0.24720 0.77792 1.00134 1.08127 1.35241 1.46375 1.54998 1.66207 1.83862 1.85831 1.86063 2.45246 2.57234 2.93091 3.33368 3.47005 3.59309 3.78499 3.79652 3.88332 3.98155 4.00859 4.09432 4.19130 4.28323 4.28690 4.39879 4.43550 4.48853 4.57326 4.62303 4.66037 4.67797 4.68784 4.70970 4.71905 4.76653 4.79108 4.93724 4.97384 5.06736 5.08525 5.13883 5.30034 5.33033 5.39933 5.42561 5.45623 5.47130 5.49196 5.52267 5.80858 6.46644 6.56555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.442 4.442 2 Si 0.966 3.034 3 C -0.442 4.442 4 C -0.396 4.396 5 C -0.111 4.111 6 C -0.079 4.079 7 C 0.070 3.930 8 O -0.319 6.319 9 C 0.156 3.844 10 C -0.141 4.141 11 C -0.068 4.068 12 O -0.527 6.527 13 Si 0.936 3.064 14 H -0.247 1.247 15 H -0.247 1.247 16 H -0.245 1.245 17 C -0.102 4.102 18 C -0.025 4.025 19 Cl -0.054 7.054 20 C -0.031 4.031 21 C -0.108 4.108 22 C -0.101 4.101 23 C -0.112 4.112 24 C -0.092 4.092 25 C -0.063 4.063 26 C -0.395 4.395 27 H 0.068 0.932 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.069 0.931 33 H 0.077 0.923 34 H 0.078 0.922 35 H 0.061 0.939 36 H 0.072 0.928 37 H 0.085 0.915 38 H 0.056 0.944 39 H 0.056 0.944 40 H 0.115 0.885 41 H 0.375 0.625 42 H 0.138 0.862 43 H 0.136 0.864 44 H 0.130 0.870 45 H 0.129 0.871 46 H 0.136 0.864 47 H 0.082 0.918 48 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.185 2.734 0.034 2.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.551 4.551 2 Si 1.163 2.837 3 C -0.550 4.550 4 C -0.483 4.483 5 C -0.149 4.149 6 C -0.097 4.097 7 C -0.003 4.003 8 O -0.236 6.236 9 C 0.111 3.889 10 C -0.142 4.142 11 C -0.179 4.179 12 O -0.331 6.331 13 Si 0.758 3.242 14 H -0.171 1.171 15 H -0.171 1.171 16 H -0.169 1.169 17 C -0.120 4.120 18 C -0.052 4.052 19 Cl -0.025 7.025 20 C -0.032 4.032 21 C -0.126 4.126 22 C -0.119 4.119 23 C -0.130 4.130 24 C -0.110 4.110 25 C -0.064 4.064 26 C -0.481 4.481 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.096 0.904 34 H 0.097 0.903 35 H 0.080 0.920 36 H 0.091 0.909 37 H 0.103 0.897 38 H 0.074 0.926 39 H 0.074 0.926 40 H 0.133 0.867 41 H 0.221 0.779 42 H 0.155 0.845 43 H 0.153 0.847 44 H 0.148 0.852 45 H 0.147 0.853 46 H 0.154 0.846 47 H 0.101 0.899 48 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -0.602 2.684 -0.662 2.829 hybrid contribution 0.874 -0.314 0.090 0.933 sum 0.272 2.369 -0.572 2.452 Atomic orbital electron populations 1.26017 1.19974 1.04644 1.04439 0.80527 0.67456 0.67536 0.68138 1.26011 1.06572 1.17900 1.04505 1.26659 1.03854 1.08010 1.09766 1.21910 0.97906 1.00696 0.94353 1.21511 0.95492 0.98416 0.94311 1.23074 0.95696 0.84706 0.96855 1.86064 1.42869 1.41867 1.52757 1.18124 0.85757 0.93400 0.91575 1.20163 0.96091 1.00316 0.97644 1.24846 0.91859 0.99442 1.01761 1.86579 1.52735 1.34760 1.59059 0.85909 0.81612 0.80630 0.76084 1.17082 1.17095 1.16876 1.20584 0.90431 1.00506 1.00502 1.20559 0.89005 0.98370 0.97258 1.98387 1.44748 1.81062 1.78332 1.17680 0.93864 0.96084 0.95526 1.21119 0.95649 0.97984 0.97883 1.20995 0.99517 0.95865 0.95499 1.21004 0.92357 0.99787 0.99815 1.21004 0.97993 0.96225 0.95812 1.18257 0.91756 0.98300 0.98066 1.26678 1.05324 1.05335 1.10755 0.91241 0.91123 0.90980 0.91106 0.91118 0.91167 0.90439 0.90311 0.92019 0.90895 0.89652 0.92606 0.92599 0.86718 0.77857 0.84476 0.84651 0.85222 0.85267 0.84640 0.89915 0.90232 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.77 8.65 101.05 0.87 1.64 16 2 Si 0.97 -2.79 13.35 -169.99 -2.27 -5.06 16 3 C -0.44 0.86 8.65 101.05 0.87 1.74 16 4 C -0.40 0.57 5.95 38.72 0.23 0.80 16 5 C -0.11 0.08 5.06 -24.87 -0.13 -0.05 16 6 C -0.08 0.05 2.58 -89.07 -0.23 -0.18 16 7 C 0.07 0.01 5.02 37.16 0.19 0.19 16 8 O -0.32 -0.64 8.36 -19.22 -0.16 -0.81 16 9 C 0.16 0.36 5.67 -39.12 -0.22 0.13 16 10 C -0.14 -0.22 5.24 -104.83 -0.55 -0.76 16 11 C -0.07 -0.03 2.32 36.01 0.08 0.05 16 12 O -0.53 -0.67 12.88 -35.23 -0.45 -1.12 16 13 Si 0.94 -0.09 25.44 -169.99 -4.33 -4.41 16 14 H -0.25 0.06 6.72 56.52 0.38 0.44 16 15 H -0.25 -0.26 7.11 56.52 0.40 0.15 16 16 H -0.25 -0.10 7.11 56.52 0.40 0.31 16 17 C -0.10 -0.15 8.33 -39.93 -0.33 -0.48 16 18 C -0.03 -0.05 6.32 -39.39 -0.25 -0.30 16 19 Cl -0.05 -0.08 27.50 -51.86 -1.43 -1.51 16 20 C -0.03 -0.07 5.74 -106.82 -0.61 -0.68 16 21 C -0.11 -0.13 9.44 -39.49 -0.37 -0.50 16 22 C -0.10 -0.01 9.95 -39.94 -0.40 -0.40 16 23 C -0.11 0.00 9.95 -39.93 -0.40 -0.40 16 24 C -0.09 -0.10 9.56 -39.52 -0.38 -0.48 16 25 C -0.06 -0.15 5.75 -106.72 -0.61 -0.76 16 26 C -0.40 0.81 5.28 38.41 0.20 1.02 16 27 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 28 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 30 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 33 H 0.08 -0.12 8.06 -51.93 -0.42 -0.54 16 34 H 0.08 -0.08 8.06 -51.93 -0.42 -0.50 16 35 H 0.06 -0.08 8.05 -51.93 -0.42 -0.50 16 36 H 0.07 0.04 8.12 -51.93 -0.42 -0.38 16 37 H 0.09 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.06 -0.02 7.05 -51.93 -0.37 -0.39 16 39 H 0.06 -0.03 8.07 -51.93 -0.42 -0.45 16 40 H 0.12 0.00 6.44 -51.93 -0.33 -0.33 16 41 H 0.37 -0.70 8.70 45.56 0.40 -0.30 16 42 H 0.14 0.03 4.78 -52.49 -0.25 -0.22 16 43 H 0.14 0.02 6.98 -52.49 -0.37 -0.35 16 44 H 0.13 -0.27 8.06 -52.48 -0.42 -0.69 16 45 H 0.13 -0.27 8.06 -52.48 -0.42 -0.69 16 46 H 0.14 0.01 7.62 -52.49 -0.40 -0.39 16 47 H 0.08 -0.19 8.04 -51.93 -0.42 -0.60 16 48 H 0.08 -0.19 7.84 -51.93 -0.41 -0.59 16 LS Contribution 397.77 15.07 5.99 5.99 Total: 0.00 -4.52 397.77 -11.48 -16.00 By element: Atomic # 1 Polarization: -2.85 SS G_CDS: -6.81 Total: -9.66 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -2.03 Total: 0.57 kcal Atomic # 8 Polarization: -1.31 SS G_CDS: -0.61 Total: -1.93 kcal Atomic # 14 Polarization: -2.88 SS G_CDS: -6.59 Total: -9.48 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.43 Total: -1.51 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -4.52 -11.48 -16.00 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_8272892_18051908.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.449 kcal (2) G-P(sol) polarization free energy of solvation -4.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.478 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.000 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.449 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds