Wall clock time and date at job start Sat Mar 6 2021 01:14:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35993 * 116.99713 * 2 1 4 4 C 1.38519 * 120.07117 * 0.20566 * 3 2 1 5 5 C 1.38362 * 119.98804 * 180.26006 * 4 3 2 6 6 Br 1.89103 * 119.93519 * 179.76853 * 5 4 3 7 7 C 1.38286 * 120.12900 * 359.78119 * 5 4 3 8 8 C 1.50702 * 119.93345 * 180.02562 * 7 5 4 9 9 O 1.42901 * 109.46842 * 284.65782 * 8 7 5 10 10 Si 1.86299 * 109.47235 * 164.65697 * 8 7 5 11 11 H 1.48501 * 109.47142 * 65.72468 * 10 8 7 12 12 H 1.48493 * 109.47081 * 185.72584 * 10 8 7 13 13 H 1.48494 * 109.47080 * 305.72864 * 10 8 7 14 14 C 1.38287 * 120.13520 * 359.97438 * 7 5 4 15 15 C 1.38511 * 120.00902 * 359.97438 * 14 7 5 16 16 O 1.36010 * 120.06389 * 179.97438 * 15 14 7 17 17 C 1.42896 * 116.99850 * 0.02562 * 16 15 14 18 18 C 1.53003 * 109.47015 * 179.97438 * 17 16 15 19 19 C 1.53575 * 109.12421 * 66.45642 * 18 17 16 20 20 C 1.55906 * 109.50867 * 169.52017 * 19 18 17 21 21 Si 1.89662 * 99.33649 * 319.37668 * 20 19 18 22 22 C 1.86301 * 111.45726 * 138.35769 * 21 20 19 23 23 C 1.86297 * 111.45745 * 263.30109 * 21 20 19 24 24 C 1.55350 * 109.09537 * 188.23376 * 18 17 16 25 25 H 1.08994 * 109.47619 * 300.00682 * 1 2 3 26 26 H 1.09004 * 109.46951 * 60.00328 * 1 2 3 27 27 H 1.09000 * 109.47540 * 179.97438 * 1 2 3 28 28 H 1.07998 * 120.00692 * 359.97438 * 4 3 2 29 29 H 1.08991 * 109.46815 * 44.65459 * 8 7 5 30 30 H 0.96701 * 114.00009 * 299.99552 * 9 8 7 31 31 H 1.08000 * 119.99472 * 179.97438 * 14 7 5 32 32 H 1.09003 * 109.47375 * 59.99999 * 17 16 15 33 33 H 1.08998 * 109.47173 * 299.99607 * 17 16 15 34 34 H 1.09002 * 109.02029 * 307.35460 * 18 17 16 35 35 H 1.09004 * 109.47280 * 49.48995 * 19 18 17 36 36 H 1.09003 * 109.47044 * 289.54667 * 19 18 17 37 37 H 1.08999 * 111.42968 * 201.85109 * 20 19 18 38 38 H 1.09000 * 111.43005 * 76.90599 * 20 19 18 39 39 H 1.09004 * 109.46834 * 185.06792 * 22 21 20 40 40 H 1.08999 * 109.47178 * 65.06548 * 22 21 20 41 41 H 1.09007 * 109.46982 * 305.06483 * 22 21 20 42 42 H 1.08995 * 109.47476 * 294.93070 * 23 21 20 43 43 H 1.09000 * 109.46924 * 54.93803 * 23 21 20 44 44 H 1.09004 * 109.46888 * 174.93071 * 23 21 20 45 45 H 1.09004 * 111.07632 * 92.91333 * 24 18 17 46 46 H 1.09009 * 111.09714 * 328.90157 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 1.2933 2.3743 0.0043 5 6 1.9231 3.6063 -0.0011 6 35 0.8936 5.1925 -0.0019 7 6 3.3040 3.6798 -0.0063 8 6 3.9855 5.0240 -0.0117 9 8 3.8920 5.6002 -1.3160 10 14 5.7787 4.8130 0.4470 11 1 6.4718 4.0340 -0.6104 12 1 6.4167 6.1475 0.5772 13 1 5.8771 4.0890 1.7398 14 6 4.0609 2.5225 -0.0055 15 6 3.4363 1.2863 0.0010 16 8 4.1796 0.1473 0.0012 17 6 5.6004 0.2999 -0.0049 18 6 6.2616 -1.0799 -0.0029 19 6 5.9511 -1.7884 -1.3296 20 6 6.8286 -3.0712 -1.4526 21 14 8.4615 -2.3940 -0.7655 22 6 9.2887 -3.6246 0.3624 23 6 9.6060 -1.8569 -2.1337 24 6 7.7922 -0.9098 0.2007 25 1 -0.3634 0.5139 0.8898 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3634 -1.0276 -0.0005 28 1 0.2147 2.3192 0.0072 29 1 3.5004 5.6801 0.7109 30 1 4.3038 5.0688 -2.0112 31 1 5.1393 2.5826 -0.0100 32 1 5.9104 0.8521 0.8824 33 1 5.9033 0.8470 -0.8976 34 1 5.8544 -1.6678 0.8197 35 1 6.1702 -1.1172 -2.1600 36 1 4.8971 -2.0653 -1.3557 37 1 6.9331 -3.3841 -2.4915 38 1 6.4408 -3.8799 -0.8331 39 1 10.1740 -3.1709 0.8082 40 1 9.5810 -4.5041 -0.2113 41 1 8.5952 -3.9187 1.1503 42 1 9.9003 -2.7251 -2.7232 43 1 9.0942 -1.1390 -2.7747 44 1 10.4933 -1.3920 -1.7037 45 1 8.0572 -0.9777 1.2559 46 1 8.1435 0.0281 -0.2297 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_7_8663_18051908.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:14:20 Heat of formation + Delta-G solvation = -125.575768 kcal Electronic energy + Delta-G solvation = -26207.516616 eV Core-core repulsion = 22460.361565 eV Total energy + Delta-G solvation = -3747.155051 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 388.066 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.84655 -39.79451 -39.12207 -37.23678 -36.57814 -32.84158 -32.21775 -30.82002 -29.93085 -29.28631 -28.59808 -28.56191 -27.39725 -26.06347 -24.33822 -23.19864 -22.52655 -20.81882 -19.71598 -18.56746 -18.07834 -17.57973 -17.20437 -16.57174 -16.40298 -16.16521 -15.87419 -15.76342 -15.70612 -14.88372 -14.84697 -14.47198 -14.08171 -13.99745 -13.97568 -13.89807 -13.71715 -13.58113 -13.48714 -13.34950 -13.10412 -12.87541 -12.58232 -12.42927 -12.31675 -12.29621 -12.23862 -12.17554 -11.85444 -11.70637 -11.48140 -11.14464 -10.99771 -10.94746 -10.64534 -10.46501 -10.36774 -9.87263 -8.87619 -0.03468 0.03664 0.68548 1.04143 1.30808 1.42878 1.50324 1.79993 1.82460 1.82669 2.07762 2.15497 2.34311 2.48814 3.35869 3.45853 3.62350 3.69555 3.87220 3.89024 3.99698 4.02503 4.15225 4.18330 4.27525 4.30293 4.42472 4.44765 4.51534 4.53193 4.54626 4.63180 4.63796 4.66210 4.68444 4.69223 4.71357 4.78886 5.03479 5.05465 5.06753 5.27796 5.28847 5.36131 5.40595 5.45971 5.46977 5.95480 6.43501 6.52432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.299 6.299 3 C 0.112 3.888 4 C -0.147 4.147 5 C -0.065 4.065 6 Br -0.030 7.030 7 C -0.088 4.088 8 C -0.082 4.082 9 O -0.524 6.524 10 Si 0.939 3.061 11 H -0.249 1.249 12 H -0.246 1.246 13 H -0.247 1.247 14 C -0.179 4.179 15 C 0.128 3.872 16 O -0.295 6.295 17 C 0.057 3.943 18 C -0.078 4.078 19 C -0.113 4.113 20 C -0.396 4.396 21 Si 0.967 3.033 22 C -0.442 4.442 23 C -0.442 4.442 24 C -0.397 4.397 25 H 0.058 0.942 26 H 0.058 0.942 27 H 0.105 0.895 28 H 0.148 0.852 29 H 0.123 0.877 30 H 0.374 0.626 31 H 0.140 0.860 32 H 0.063 0.937 33 H 0.064 0.936 34 H 0.085 0.915 35 H 0.063 0.937 36 H 0.073 0.927 37 H 0.078 0.922 38 H 0.078 0.922 39 H 0.069 0.931 40 H 0.070 0.930 41 H 0.071 0.929 42 H 0.070 0.930 43 H 0.070 0.930 44 H 0.069 0.931 45 H 0.083 0.917 46 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.796 -2.152 -0.036 2.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.212 6.212 3 C 0.065 3.935 4 C -0.167 4.167 5 C -0.145 4.145 6 Br 0.055 6.945 7 C -0.091 4.091 8 C -0.192 4.192 9 O -0.329 6.329 10 Si 0.761 3.239 11 H -0.173 1.173 12 H -0.169 1.169 13 H -0.170 1.170 14 C -0.198 4.198 15 C 0.081 3.919 16 O -0.208 6.208 17 C -0.018 4.018 18 C -0.097 4.097 19 C -0.150 4.150 20 C -0.483 4.483 21 Si 1.165 2.835 22 C -0.550 4.550 23 C -0.550 4.550 24 C -0.482 4.482 25 H 0.077 0.923 26 H 0.077 0.923 27 H 0.123 0.877 28 H 0.166 0.834 29 H 0.141 0.859 30 H 0.221 0.779 31 H 0.158 0.842 32 H 0.082 0.918 33 H 0.082 0.918 34 H 0.103 0.897 35 H 0.081 0.919 36 H 0.092 0.908 37 H 0.097 0.903 38 H 0.097 0.903 39 H 0.088 0.912 40 H 0.089 0.911 41 H 0.090 0.910 42 H 0.090 0.910 43 H 0.089 0.911 44 H 0.089 0.911 45 H 0.102 0.898 46 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 2.026 -1.590 0.523 2.628 hybrid contribution -0.291 -0.357 -0.334 0.569 sum 1.735 -1.948 0.190 2.615 Atomic orbital electron populations 1.23179 0.77888 1.04635 1.01571 1.86222 1.21519 1.24945 1.88520 1.18146 0.89024 0.85264 1.01046 1.21046 1.00658 0.89838 1.05186 1.21281 0.93382 0.92209 1.07629 1.96767 1.69354 1.30866 1.97467 1.19876 0.92259 0.95662 1.01311 1.25021 1.11062 0.92996 0.90163 1.86596 1.82049 1.48728 1.15516 0.85853 0.74959 0.81693 0.81388 1.17298 1.16934 1.17016 1.20918 1.00174 0.90748 1.07988 1.18169 0.88324 0.86069 0.99308 1.86231 1.18992 1.27571 1.88019 1.23200 0.77671 0.99464 1.01439 1.21514 0.94389 0.94005 0.99754 1.21918 1.01253 0.95907 0.95921 1.26660 1.15219 1.00190 1.06198 0.80515 0.67902 0.67572 0.67549 1.26013 1.07558 1.11263 1.10213 1.26009 1.10271 1.05878 1.12838 1.26700 0.98488 1.14288 1.08763 0.92343 0.92347 0.87650 0.83441 0.85909 0.77904 0.84235 0.91839 0.91778 0.89706 0.91858 0.90795 0.90341 0.90302 0.91211 0.91059 0.91003 0.91042 0.91086 0.91133 0.89811 0.90156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.30 -0.78 10.28 -34.21 -0.35 -1.14 16 3 C 0.11 0.29 6.70 -39.12 -0.26 0.03 16 4 C -0.15 -0.22 8.77 -39.43 -0.35 -0.57 16 5 C -0.06 -0.13 6.22 -39.52 -0.25 -0.37 16 6 Br -0.03 -0.06 31.96 -68.01 -2.17 -2.23 16 7 C -0.09 -0.12 5.26 -104.59 -0.55 -0.67 16 8 C -0.08 -0.03 2.02 36.01 0.07 0.05 16 9 O -0.52 -0.29 12.71 -35.23 -0.45 -0.73 16 10 Si 0.94 -0.38 25.31 -169.99 -4.30 -4.69 16 11 H -0.25 0.27 6.96 56.52 0.39 0.66 16 12 H -0.25 -0.19 7.11 56.52 0.40 0.22 16 13 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 14 C -0.18 -0.21 7.64 -39.46 -0.30 -0.51 16 15 C 0.13 0.33 6.70 -39.12 -0.26 0.07 16 16 O -0.29 -0.79 9.69 -34.27 -0.33 -1.12 16 17 C 0.06 0.01 3.98 37.16 0.15 0.16 16 18 C -0.08 0.05 2.58 -89.07 -0.23 -0.18 16 19 C -0.11 0.04 5.06 -24.88 -0.13 -0.09 16 20 C -0.40 0.54 5.95 38.71 0.23 0.77 16 21 Si 0.97 -2.89 13.35 -169.99 -2.27 -5.16 16 22 C -0.44 0.86 8.65 101.05 0.87 1.73 16 23 C -0.44 0.91 8.65 101.05 0.87 1.78 16 24 C -0.40 0.87 5.28 38.40 0.20 1.07 16 25 H 0.06 -0.12 7.65 -51.93 -0.40 -0.52 16 26 H 0.06 -0.12 7.67 -51.93 -0.40 -0.52 16 27 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.15 -0.04 6.30 -52.49 -0.33 -0.37 16 29 H 0.12 0.04 7.20 -51.93 -0.37 -0.34 16 30 H 0.37 -1.00 8.70 45.56 0.40 -0.60 16 31 H 0.14 -0.06 3.28 -52.49 -0.17 -0.23 16 32 H 0.06 -0.04 7.65 -51.93 -0.40 -0.44 16 33 H 0.06 -0.06 7.60 -51.93 -0.39 -0.45 16 34 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 35 H 0.06 -0.05 8.05 -51.93 -0.42 -0.47 16 36 H 0.07 0.09 8.11 -51.93 -0.42 -0.34 16 37 H 0.08 -0.11 8.06 -51.93 -0.42 -0.53 16 38 H 0.08 -0.09 8.06 -51.93 -0.42 -0.51 16 39 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 41 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 42 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 43 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 44 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 45 H 0.08 -0.21 8.04 -51.93 -0.42 -0.62 16 46 H 0.08 -0.21 7.85 -51.92 -0.41 -0.62 16 LS Contribution 386.02 15.07 5.82 5.82 Total: 0.00 -5.06 386.02 -9.69 -14.75 By element: Atomic # 1 Polarization: -3.03 SS G_CDS: -6.70 Total: -9.73 kcal Atomic # 6 Polarization: 3.16 SS G_CDS: 1.07 Total: 4.23 kcal Atomic # 8 Polarization: -1.86 SS G_CDS: -1.13 Total: -2.99 kcal Atomic # 14 Polarization: -3.27 SS G_CDS: -6.57 Total: -9.85 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.17 Total: -2.23 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -5.06 -9.69 -14.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_7_8663_18051908.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.827 kcal (2) G-P(sol) polarization free energy of solvation -5.061 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.888 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.688 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.748 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds