Wall clock time and date at job start Sat Mar 6 2021 02:05:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.42898 * 109.47030 * 2 1 4 4 C 1.35902 * 117.00058 * 84.95625 * 3 2 1 5 5 C 1.38726 * 120.05474 * 174.27336 * 4 3 2 6 6 C 1.38151 * 119.94021 * 179.74068 * 5 4 3 7 7 C 1.38260 * 120.05647 * 0.50288 * 6 5 4 8 8 C 1.50704 * 119.94422 * 179.74574 * 7 6 5 9 9 O 1.42901 * 109.47321 * 245.02377 * 8 7 6 10 10 Si 1.86299 * 109.46998 * 5.02689 * 8 7 6 11 11 C 1.38267 * 120.11377 * 359.77275 * 7 6 5 12 12 C 1.38145 * 120.05383 * 359.97146 * 11 7 6 13 13 C 1.50696 * 109.46973 * 239.99727 * 2 1 3 14 14 O 1.20826 * 119.99933 * 120.00240 * 13 2 1 15 15 O 1.34234 * 120.00142 * 300.00685 * 13 2 1 16 16 C 1.45202 * 116.99769 * 179.97438 * 15 13 2 17 17 C 1.52997 * 109.46816 * 179.97438 * 16 15 13 18 18 H 1.09001 * 109.47710 * 54.99804 * 17 16 15 19 19 C 1.53005 * 109.47390 * 174.99815 * 17 16 15 20 20 C 1.52996 * 109.47537 * 179.97438 * 19 17 16 21 21 C 1.53000 * 109.47452 * 300.00598 * 20 19 17 22 22 H 1.09000 * 109.46454 * 299.99512 * 21 20 19 23 23 O 1.42889 * 109.47261 * 180.02562 * 21 20 19 24 24 C 1.52997 * 109.47328 * 59.99442 * 21 20 19 25 25 C 1.53005 * 109.47098 * 294.99873 * 17 16 15 26 26 H 1.08997 * 109.47510 * 180.02562 * 1 2 3 27 27 H 1.09008 * 109.47057 * 300.00416 * 1 2 3 28 28 H 1.09002 * 109.46695 * 59.99450 * 1 2 3 29 29 H 1.09003 * 109.46729 * 119.99997 * 2 1 3 30 30 H 1.07998 * 120.02902 * 359.97438 * 5 4 3 31 31 H 1.08001 * 119.96919 * 180.23246 * 6 5 4 32 32 H 1.09005 * 109.46861 * 125.02178 * 8 7 6 33 33 H 0.96704 * 113.99385 * 59.99771 * 9 8 7 34 34 H 1.48502 * 110.00121 * 180.02562 * 10 8 7 35 35 H 1.48500 * 110.00049 * 301.31683 * 10 8 7 36 36 H 1.08000 * 119.97400 * 179.97438 * 11 7 6 37 37 H 1.07996 * 120.03101 * 179.97438 * 12 11 7 38 38 H 1.08996 * 109.47255 * 59.99820 * 16 15 13 39 39 H 1.09001 * 109.47131 * 299.99320 * 16 15 13 40 40 H 1.09001 * 109.46703 * 59.99373 * 19 17 16 41 41 H 1.09003 * 109.46912 * 300.00276 * 19 17 16 42 42 H 1.08997 * 109.47244 * 179.97438 * 20 19 17 43 43 H 1.09000 * 109.46892 * 59.99841 * 20 19 17 44 44 H 0.96705 * 114.00116 * 179.97438 * 23 21 20 45 45 H 1.08999 * 109.47035 * 60.00112 * 24 21 20 46 46 H 1.08995 * 109.47306 * 180.02562 * 24 21 20 47 47 H 1.09000 * 109.46778 * 299.99942 * 25 17 16 48 48 H 1.09000 * 109.46961 * 60.00338 * 25 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.1116 1.9645 1.2062 5 6 2.6778 3.2280 1.2931 6 6 2.7788 3.8554 2.5197 7 6 2.3256 3.2209 3.6615 8 6 2.4423 3.9054 4.9991 9 8 3.3413 3.1716 5.8329 10 14 3.0911 5.6349 4.7571 11 6 1.7662 1.9592 3.5783 12 6 1.6581 1.3297 2.3534 13 6 2.0323 -0.7105 -1.2304 14 8 2.7270 -0.1233 -2.0258 15 8 1.7079 -1.9956 -1.4429 16 6 2.2266 -2.6156 -2.6490 17 6 1.7555 -4.0696 -2.7180 18 1 0.6685 -4.1033 -2.6450 19 6 2.1966 -4.6862 -4.0471 20 6 1.7261 -6.1404 -4.1158 21 6 2.3401 -6.9304 -2.9583 22 1 3.4271 -6.8964 -3.0316 23 8 1.9011 -8.2887 -3.0229 24 6 1.8990 -6.3139 -1.6294 25 6 2.3692 -4.8600 -1.5605 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 3.0358 3.7222 0.4021 31 1 3.2160 4.8406 2.5874 32 1 1.4611 3.9483 5.4720 33 1 4.2357 3.0931 5.4735 34 1 3.2113 6.3204 6.0689 35 1 4.4142 5.5915 4.0842 36 1 1.4134 1.4655 4.4717 37 1 1.2215 0.3440 2.2890 38 1 3.3161 -2.5874 -2.6324 39 1 1.8624 -2.0735 -3.5217 40 1 3.2837 -4.6525 -4.1201 41 1 1.7595 -4.1231 -4.8716 42 1 2.0400 -6.5794 -5.0628 43 1 0.6391 -6.1743 -4.0425 44 1 2.2526 -8.8496 -2.3179 45 1 0.8120 -6.3478 -1.5562 46 1 2.3367 -6.8765 -0.8048 47 1 3.4562 -4.8264 -1.6336 48 1 2.0548 -4.4208 -0.6137 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10157686_16737258.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:05:22 Heat of formation + Delta-G solvation = -185.631904 kcal Electronic energy + Delta-G solvation = -28903.961327 eV Core-core repulsion = 24697.561009 eV Total energy + Delta-G solvation = -4206.400318 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.170 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.06385 -41.18654 -40.16481 -39.33420 -37.79659 -37.26777 -36.61192 -33.67941 -32.16118 -31.96446 -31.95282 -31.44349 -27.27451 -26.66013 -25.48097 -24.27672 -23.92336 -22.81262 -22.30039 -21.65421 -20.97707 -19.67297 -18.72991 -18.28226 -18.27877 -18.02938 -17.66083 -16.72204 -16.65409 -16.48904 -16.27118 -16.19981 -15.59992 -15.53811 -15.26144 -15.16108 -14.80479 -14.63738 -14.47543 -14.26170 -13.98403 -13.90909 -13.56846 -13.51188 -13.35352 -13.31754 -13.23792 -12.97538 -12.63854 -12.26892 -12.25489 -12.20630 -12.16159 -11.96583 -11.80336 -11.64164 -11.59580 -11.35601 -11.21692 -10.79996 -10.60505 -10.10308 -9.29672 -4.97408 0.17559 0.28033 0.94263 1.03814 1.27439 1.57609 1.95173 2.26792 2.58774 3.06007 3.25779 3.36473 3.45326 3.48895 3.57258 3.61445 3.65834 3.67663 3.77451 3.80478 3.94551 4.03855 4.15401 4.17985 4.22412 4.22753 4.25851 4.33868 4.36308 4.38846 4.42884 4.48739 4.52368 4.60312 4.66561 4.81922 4.87326 4.92761 4.93153 4.94735 5.03416 5.03617 5.12062 5.18331 5.22312 5.23686 5.33386 5.42532 5.58420 6.18285 6.38549 6.59829 6.64686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.095 3.905 3 O -0.288 6.288 4 C 0.135 3.865 5 C -0.140 4.140 6 C -0.077 4.077 7 C -0.153 4.153 8 C -0.070 4.070 9 O -0.531 6.531 10 Si 0.684 3.316 11 C -0.050 4.050 12 C -0.210 4.210 13 C 0.466 3.534 14 O -0.481 6.481 15 O -0.349 6.349 16 C 0.072 3.928 17 C -0.089 4.089 18 H 0.087 0.913 19 C -0.111 4.111 20 C -0.111 4.111 21 C 0.102 3.898 22 H 0.055 0.945 23 O -0.569 6.569 24 C -0.152 4.152 25 C -0.113 4.113 26 H 0.090 0.910 27 H 0.082 0.918 28 H 0.076 0.924 29 H 0.113 0.887 30 H 0.138 0.862 31 H 0.135 0.865 32 H 0.118 0.882 33 H 0.376 0.624 34 H -0.257 1.257 35 H -0.260 1.260 36 H 0.131 0.869 37 H 0.133 0.867 38 H 0.074 0.926 39 H 0.076 0.924 40 H 0.070 0.930 41 H 0.076 0.924 42 H 0.074 0.926 43 H 0.073 0.927 44 H 0.379 0.621 45 H 0.073 0.927 46 H 0.067 0.933 47 H 0.065 0.935 48 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.914 -1.080 0.760 2.325 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.038 3.962 3 O -0.202 6.202 4 C 0.090 3.910 5 C -0.158 4.158 6 C -0.094 4.094 7 C -0.154 4.154 8 C -0.180 4.180 9 O -0.337 6.337 10 Si 0.585 3.415 11 C -0.068 4.068 12 C -0.229 4.229 13 C 0.306 3.694 14 O -0.366 6.366 15 O -0.266 6.266 16 C -0.001 4.001 17 C -0.107 4.107 18 H 0.106 0.894 19 C -0.148 4.148 20 C -0.149 4.149 21 C 0.043 3.957 22 H 0.073 0.927 23 O -0.375 6.375 24 C -0.190 4.190 25 C -0.150 4.150 26 H 0.109 0.891 27 H 0.101 0.899 28 H 0.095 0.905 29 H 0.130 0.870 30 H 0.156 0.844 31 H 0.152 0.848 32 H 0.135 0.865 33 H 0.223 0.777 34 H -0.182 1.182 35 H -0.185 1.185 36 H 0.148 0.852 37 H 0.151 0.849 38 H 0.093 0.907 39 H 0.094 0.906 40 H 0.089 0.911 41 H 0.094 0.906 42 H 0.093 0.907 43 H 0.091 0.909 44 H 0.226 0.774 45 H 0.091 0.909 46 H 0.085 0.915 47 H 0.083 0.917 48 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -1.851 -0.096 0.311 1.879 hybrid contribution 1.196 -1.195 0.656 1.814 sum -0.655 -1.292 0.966 1.741 Atomic orbital electron populations 1.22358 0.91152 1.04894 1.04923 1.21639 0.96439 0.82666 0.95502 1.86160 1.81268 1.25080 1.27653 1.19028 0.95498 0.92895 0.83621 1.20412 1.03039 0.93556 0.98824 1.20894 0.97942 0.99155 0.91446 1.20204 1.03288 0.96535 0.95349 1.24950 0.98230 1.04967 0.89845 1.86601 1.24286 1.75074 1.47756 0.94999 0.85324 0.77853 0.83293 1.20817 0.95399 0.93640 0.96930 1.21354 1.07037 1.01874 0.92628 1.22967 0.78288 0.80942 0.87196 1.90740 1.34062 1.66479 1.45343 1.86422 1.69951 1.25381 1.44869 1.23250 0.99399 0.92954 0.84542 1.21283 1.02100 0.91189 0.96129 0.89441 1.21481 1.01836 0.95317 0.96203 1.21437 1.01641 0.93627 0.98154 1.21846 0.97343 0.81719 0.94744 0.92706 1.86520 1.75233 1.20493 1.55224 1.22268 1.02491 0.96385 0.97822 1.21535 1.00550 0.94376 0.98568 0.89132 0.89906 0.90452 0.86976 0.84432 0.84778 0.86457 0.77654 1.18228 1.18500 0.85154 0.84900 0.90733 0.90582 0.91140 0.90580 0.90720 0.90875 0.77361 0.90857 0.91459 0.91676 0.90722 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.37 9.10 37.16 0.34 0.71 16 2 C 0.10 -0.01 2.75 -27.88 -0.08 -0.09 16 3 O -0.29 -0.66 9.33 -39.38 -0.37 -1.03 16 4 C 0.13 0.16 6.60 -39.22 -0.26 -0.09 16 5 C -0.14 -0.11 9.99 -39.43 -0.39 -0.50 16 6 C -0.08 0.02 8.66 -39.61 -0.34 -0.32 16 7 C -0.15 0.03 5.35 -104.60 -0.56 -0.53 16 8 C -0.07 0.04 2.80 36.01 0.10 0.14 16 9 O -0.53 -0.51 12.83 -35.23 -0.45 -0.96 16 10 Si 0.68 -0.76 29.88 -169.99 -5.08 -5.84 16 11 C -0.05 0.01 9.68 -39.60 -0.38 -0.37 16 12 C -0.21 0.06 8.24 -39.43 -0.33 -0.27 16 13 C 0.47 0.91 7.33 36.00 0.26 1.17 16 14 O -0.48 -2.67 16.25 -25.48 -0.41 -3.09 16 15 O -0.35 -0.11 9.66 -39.27 -0.38 -0.49 16 16 C 0.07 -0.04 4.84 37.16 0.18 0.14 16 17 C -0.09 0.16 2.44 -90.62 -0.22 -0.06 16 18 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 19 C -0.11 0.23 5.20 -26.73 -0.14 0.09 16 20 C -0.11 0.09 5.57 -26.73 -0.15 -0.06 16 21 C 0.10 -0.08 3.47 -26.73 -0.09 -0.17 16 22 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 23 O -0.57 -0.34 13.32 -35.23 -0.47 -0.81 16 24 C -0.15 0.26 5.54 -26.75 -0.15 0.11 16 25 C -0.11 0.21 5.10 -26.75 -0.14 0.07 16 26 H 0.09 -0.31 8.11 -51.93 -0.42 -0.73 16 27 H 0.08 -0.23 6.91 -51.92 -0.36 -0.59 16 28 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.11 -0.24 6.31 -51.93 -0.33 -0.57 16 30 H 0.14 0.00 8.06 -52.49 -0.42 -0.42 16 31 H 0.13 -0.26 4.83 -52.49 -0.25 -0.52 16 32 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 33 H 0.38 -0.64 8.70 45.56 0.40 -0.25 16 34 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 35 H -0.26 -0.21 7.00 56.52 0.40 0.18 16 36 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 37 H 0.13 -0.31 5.43 -52.49 -0.28 -0.60 16 38 H 0.07 -0.02 8.13 -51.93 -0.42 -0.45 16 39 H 0.08 -0.03 8.13 -51.93 -0.42 -0.45 16 40 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 42 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.38 -1.22 9.08 45.56 0.41 -0.80 16 45 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 46 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 48 H 0.07 -0.12 7.82 -51.93 -0.41 -0.52 16 LS Contribution 387.03 15.07 5.83 5.83 Total: 0.00 -8.29 387.03 -10.45 -18.74 By element: Atomic # 1 Polarization: -5.54 SS G_CDS: -6.78 Total: -12.31 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: -2.34 Total: -0.03 kcal Atomic # 8 Polarization: -4.30 SS G_CDS: -2.08 Total: -6.39 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.08 Total: -5.84 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -8.29 -10.45 -18.74 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10157686_16737258.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.892 kcal (2) G-P(sol) polarization free energy of solvation -8.289 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.450 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.740 kcal (6) G-S(sol) free energy of system = (1) + (5) -185.632 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds